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Items: 1 to 50 of 56

1.

Folliculin Interacting Protein 1 Maintains Metabolic Homeostasis during B Cell Development by Modulating AMPK, mTORC1, and TFE3.

Ramírez JA, Iwata T, Park H, Tsang M, Kang J, Cui K, Kwong W, James RG, Baba M, Schmidt LS, Iritani BM.

J Immunol. 2019 Dec 1;203(11):2899-2908. doi: 10.4049/jimmunol.1900395. Epub 2019 Nov 1.

PMID:
31676673
2.

The signaling adaptor BCAP inhibits NLRP3 and NLRC4 inflammasome activation in macrophages through interactions with Flightless-1.

Carpentier SJ, Ni M, Duggan JM, James RG, Cookson BT, Hamerman JA.

Sci Signal. 2019 May 14;12(581). pii: eaau0615. doi: 10.1126/scisignal.aau0615.

3.

Activated PIK3CD drives innate B cell expansion yet limits B cell-intrinsic immune responses.

Wray-Dutra MN, Al Qureshah F, Metzler G, Oukka M, James RG, Rawlings DJ.

J Exp Med. 2018 Oct 1;215(10):2485-2496. doi: 10.1084/jem.20180617. Epub 2018 Sep 7.

4.

Activated CARD11 accelerates germinal center kinetics, promoting mTORC1 and terminal differentiation.

Wray-Dutra MN, Chawla R, Thomas KR, Seymour BJ, Arkatkar T, Sommer KM, Khim S, Trapnell C, James RG, Rawlings DJ.

J Exp Med. 2018 Sep 3;215(9):2445-2461. doi: 10.1084/jem.20180230. Epub 2018 Aug 20.

5.

Inter-scale information flow as a surrogate for downward causation that maintains spiral waves.

Ashikaga H, James RG.

Chaos. 2018 Jul;28(7):075306. doi: 10.1063/1.5017534.

PMID:
30070515
6.

Deficient Follistatin-like 3 Secretion by Asthmatic Airway Epithelium Impairs Fibroblast Regulation and Fibroblast-to-Myofibroblast Transition.

James RG, Reeves SR, Barrow KA, White MP, Glukhova VA, Haghighi C, Seyoum D, Debley JS.

Am J Respir Cell Mol Biol. 2018 Jul;59(1):104-113. doi: 10.1165/rcmb.2017-0025OC.

7.

Prediction and generation of binary Markov processes: Can a finite-state fox catch a Markov mouse?

Ruebeck JB, James RG, Mahoney JR, Crutchfield JP.

Chaos. 2018 Jan;28(1):013109. doi: 10.1063/1.5003041.

PMID:
29390624
8.

Engineering Protein-Secreting Plasma Cells by Homology-Directed Repair in Primary Human B Cells.

Hung KL, Meitlis I, Hale M, Chen CY, Singh S, Jackson SW, Miao CH, Khan IF, Rawlings DJ, James RG.

Mol Ther. 2018 Feb 7;26(2):456-467. doi: 10.1016/j.ymthe.2017.11.012. Epub 2017 Nov 22.

9.

Interferon response to respiratory syncytial virus by bronchial epithelium from children with asthma is inversely correlated with pulmonary function.

Altman MC, Reeves SR, Parker AR, Whalen E, Misura KM, Barrow KA, James RG, Hallstrand TS, Ziegler SF, Debley JS.

J Allergy Clin Immunol. 2018 Aug;142(2):451-459. doi: 10.1016/j.jaci.2017.10.004. Epub 2017 Oct 26.

10.

Information trimming: Sufficient statistics, mutual information, and predictability from effective channel states.

James RG, Mahoney JR, Crutchfield JP.

Phys Rev E. 2017 Jun;95(6-1):060102. doi: 10.1103/PhysRevE.95.060102. Epub 2017 Jun 13.

PMID:
28709305
11.

The A946T variant of the RNA sensor IFIH1 mediates an interferon program that limits viral infection but increases the risk for autoimmunity.

Gorman JA, Hundhausen C, Errett JS, Stone AE, Allenspach EJ, Ge Y, Arkatkar T, Clough C, Dai X, Khim S, Pestal K, Liggitt D, Cerosaletti K, Stetson DB, James RG, Oukka M, Concannon P, Gale M Jr, Buckner JH, Rawlings DJ.

Nat Immunol. 2017 Jul;18(7):744-752. doi: 10.1038/ni.3766. Epub 2017 May 29.

12.

Hidden structures of information transport underlying spiral wave dynamics.

Ashikaga H, James RG.

Chaos. 2017 Jan;27(1):013106. doi: 10.1063/1.4973542.

PMID:
28147497
13.

Information Flows? A Critique of Transfer Entropies.

James RG, Barnett N, Crutchfield JP.

Phys Rev Lett. 2016 Jun 10;116(23):238701. doi: 10.1103/PhysRevLett.116.238701. Epub 2016 Jun 9.

14.

Proteome analysis of mast cell releasates reveals a role for chymase in the regulation of coagulation factor XIIIA levels via proteolytic degradation.

Shubin NJ, Glukhova VA, Clauson M, Truong P, Abrink M, Pejler G, White NJ, Deutsch GH, Reeves SR, Vaisar T, James RG, Piliponsky AM.

J Allergy Clin Immunol. 2017 Jan;139(1):323-334. doi: 10.1016/j.jaci.2016.03.051. Epub 2016 May 13.

15.

Leveraging information storage to select forecast-optimal parameters for delay-coordinate reconstructions.

Garland J, James RG, Bradley E.

Phys Rev E. 2016 Feb;93(2):022221. doi: 10.1103/PhysRevE.93.022221. Epub 2016 Feb 29.

PMID:
26986345
16.

Elusive present: Hidden past and future dependency and why we build models.

Ara PM, James RG, Crutchfield JP.

Phys Rev E. 2016 Feb;93(2):022143. doi: 10.1103/PhysRevE.93.022143. Epub 2016 Feb 29.

17.

Corrigendum: Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations.

Hayes MG, Urbanek M, Ehrmann DA, Armstrong LL, Lee JY, Sisk R, Karaderi T, Barber TM, McCarthy MI, Franks S, Lindgren CM, Welt CK, Diamanti-Kandarakis E, Panidis D, Goodarzi MO, Azziz R, Zhang Y, James RG, Olivier M, Kissebah AH; Reproductive Medicine Network, Stener-Victorin E, Legro RS, Dunaif A.

Nat Commun. 2016 Feb 12;7:10762. doi: 10.1038/ncomms10762. No abstract available.

18.

Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations.

Hayes MG, Urbanek M, Ehrmann DA, Armstrong LL, Lee JY, Sisk R, Karaderi T, Barber TM, McCarthy MI, Franks S, Lindgren CM, Welt CK, Diamanti-Kandarakis E, Panidis D, Goodarzi MO, Azziz R, Zhang Y, James RG, Olivier M, Kissebah AH; Reproductive Medicine Network, Stener-Victorin E, Legro RS, Dunaif A.

Nat Commun. 2015 Aug 18;6:7502. doi: 10.1038/ncomms8502. Erratum in: Nat Commun. 2016;7:10762.

19.

The Tec Kinase-Regulated Phosphoproteome Reveals a Mechanism for the Regulation of Inhibitory Signals in Murine Macrophages.

Tampella G, Kerns HM, Niu D, Singh S, Khim S, Bosch KA, Garrett ME, Moguche A, Evans E, Browning B, Jahan TA, Nacht M, Wolf-Yadlin A, Plebani A, Hamerman JA, Rawlings DJ, James RG.

J Immunol. 2015 Jul 1;195(1):246-56. doi: 10.4049/jimmunol.1403238. Epub 2015 May 29.

20.

Many roads to synchrony: natural time scales and their algorithms.

James RG, Mahoney JR, Ellison CJ, Crutchfield JP.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Apr;89(4):042135. Epub 2014 Apr 18.

PMID:
24827220
21.

Simvastatin promotes adult hippocampal neurogenesis by enhancing Wnt/β-catenin signaling.

Robin NC, Agoston Z, Biechele TL, James RG, Berndt JD, Moon RT.

Stem Cell Reports. 2013 Dec 26;2(1):9-17. doi: 10.1016/j.stemcr.2013.11.002. eCollection 2014 Jan 14.

22.

Protein kinase PKN1 represses Wnt/β-catenin signaling in human melanoma cells.

James RG, Bosch KA, Kulikauskas RM, Yang PT, Robin NC, Toroni RA, Biechele TL, Berndt JD, von Haller PD, Eng JK, Wolf-Yadlin A, Chien AJ, Moon RT.

J Biol Chem. 2013 Nov 29;288(48):34658-70. doi: 10.1074/jbc.M113.500314. Epub 2013 Oct 10.

23.

A disease-associated PTPN22 variant promotes systemic autoimmunity in murine models.

Dai X, James RG, Habib T, Singh S, Jackson S, Khim S, Moon RT, Liggitt D, Wolf-Yadlin A, Buckner JH, Rawlings DJ.

J Clin Invest. 2013 May;123(5):2024-36. doi: 10.1172/JCI66963. Epub 2013 Apr 24.

24.

A general molecular affinity strategy for global detection and proteomic analysis of lysine methylation.

Moore KE, Carlson SM, Camp ND, Cheung P, James RG, Chua KF, Wolf-Yadlin A, Gozani O.

Mol Cell. 2013 May 9;50(3):444-56. doi: 10.1016/j.molcel.2013.03.005. Epub 2013 Apr 11.

25.

A role for Vg1/Nodal signaling in specification of the intermediate mesoderm.

Fleming BM, Yelin R, James RG, Schultheiss TM.

Development. 2013 Apr;140(8):1819-29. doi: 10.1242/dev.093740.

26.

WIKI4, a novel inhibitor of tankyrase and Wnt/ß-catenin signaling.

James RG, Davidson KC, Bosch KA, Biechele TL, Robin NC, Taylor RJ, Major MB, Camp ND, Fowler K, Martins TJ, Moon RT.

PLoS One. 2012;7(12):e50457. doi: 10.1371/journal.pone.0050457. Epub 2012 Dec 5.

27.

Wnt/β-catenin signaling and AXIN1 regulate apoptosis triggered by inhibition of the mutant kinase BRAFV600E in human melanoma.

Biechele TL, Kulikauskas RM, Toroni RA, Lucero OM, Swift RD, James RG, Robin NC, Dawson DW, Moon RT, Chien AJ.

Sci Signal. 2012 Jan 10;5(206):ra3. doi: 10.1126/scisignal.2002274.

28.

Wilms tumor gene on X chromosome (WTX) inhibits degradation of NRF2 protein through competitive binding to KEAP1 protein.

Camp ND, James RG, Dawson DW, Yan F, Davison JM, Houck SA, Tang X, Zheng N, Major MB, Moon RT.

J Biol Chem. 2012 Feb 24;287(9):6539-50. doi: 10.1074/jbc.M111.316471. Epub 2012 Jan 3.

29.

Wnt/β-catenin pathway regulates bone morphogenetic protein (BMP2)-mediated differentiation of dental follicle cells.

Silvério KG, Davidson KC, James RG, Adams AM, Foster BL, Nociti FH Jr, Somerman MJ, Moon RT.

J Periodontal Res. 2012 Jun;47(3):309-19. doi: 10.1111/j.1600-0765.2011.01433.x. Epub 2011 Dec 11.

30.

How hidden are hidden processes? A primer on crypticity and entropy convergence.

Mahoney JR, Ellison CJ, James RG, Crutchfield JP.

Chaos. 2011 Sep;21(3):037112. doi: 10.1063/1.3637502.

PMID:
21974675
31.

Anatomy of a bit: Information in a time series observation.

James RG, Ellison CJ, Crutchfield JP.

Chaos. 2011 Sep;21(3):037109. doi: 10.1063/1.3637494.

PMID:
21974672
32.

Information symmetries in irreversible processes.

Ellison CJ, Mahoney JR, James RG, Crutchfield JP, Reichardt J.

Chaos. 2011 Sep;21(3):037107. doi: 10.1063/1.3637490.

PMID:
21974670
33.

Promotion of avian endothelial cell differentiation by GATA transcription factors.

Kamei CN, Kempf H, Yelin R, Daoud G, James RG, Lassar AB, Tabin CJ, Schultheiss TM.

Dev Biol. 2011 May 1;353(1):29-37. doi: 10.1016/j.ydbio.2011.02.016. Epub 2011 Feb 23.

34.

Synchronization and control in intrinsic and designed computation: an information-theoretic analysis of competing models of stochastic computation.

Crutchfield JP, Ellison CJ, James RG, Mahoney JR.

Chaos. 2010 Sep;20(3):037105. doi: 10.1063/1.3489888.

PMID:
20887071
35.

Bruton's tyrosine kinase revealed as a negative regulator of Wnt-beta-catenin signaling.

James RG, Biechele TL, Conrad WH, Camp ND, Fass DM, Major MB, Sommer K, Yi X, Roberts BS, Cleary MA, Arthur WT, MacCoss M, Rawlings DJ, Haggarty SJ, Moon RT.

Sci Signal. 2009 May 26;2(72):ra25. doi: 10.1126/scisignal.2000230.

36.

Beta-catenin-independent Wnt pathways: signals, core proteins, and effectors.

James RG, Conrad WH, Moon RT.

Methods Mol Biol. 2008;468:131-44. doi: 10.1007/978-1-59745-249-6_10.

PMID:
19099251
37.

Odd-skipped related 1 is required for development of the metanephric kidney and regulates formation and differentiation of kidney precursor cells.

James RG, Kamei CN, Wang Q, Jiang R, Schultheiss TM.

Development. 2006 Aug;133(15):2995-3004. Epub 2006 Jun 21.

38.
39.

The forkhead genes, Foxc1 and Foxc2, regulate paraxial versus intermediate mesoderm cell fate.

Wilm B, James RG, Schultheiss TM, Hogan BL.

Dev Biol. 2004 Jul 1;271(1):176-89.

40.

Patterning of the avian intermediate mesoderm by lateral plate and axial tissues.

James RG, Schultheiss TM.

Dev Biol. 2003 Jan 1;253(1):109-24.

41.

Quantitative trait loci on chromosomes 3 and 17 influence phenotypes of the metabolic syndrome.

Kissebah AH, Sonnenberg GE, Myklebust J, Goldstein M, Broman K, James RG, Marks JA, Krakower GR, Jacob HJ, Weber J, Martin L, Blangero J, Comuzzie AG.

Proc Natl Acad Sci U S A. 2000 Dec 19;97(26):14478-83.

42.

Coaching the leader: first step in successful change.

Gelinas MV, James RG.

Healthc Benchmarks. 1999 Oct;6(10):117-8. No abstract available.

PMID:
10621089
43.

Foundation for change built on four cornerstones.

Gelinas MV, James RG.

Healthc Benchmarks. 1999 Aug;6(8):92-4.

PMID:
10557761
44.

Learn how to aid organizational change.

Gelinas MV, James RG.

Healthc Benchmarks. 1999 Sep;6(9):105-6.

PMID:
10557414
45.

Mission creates winning approach to care.

Gelinas MV, James RG.

Provider. 1999 Jul;25(7):suppl 15-6. No abstract available.

PMID:
10539078
46.

Is your benchmarking missing the mark?

Gelinas MV, James RG.

Healthc Benchmarks. 1999 Jun;6(6):68-70. No abstract available.

PMID:
10538097
47.

Influence of androgenicity on adipocytes and precursor cells in female rats.

James RG, Krakower GR, Kissebah AH.

Obes Res. 1996 Sep;4(5):463-70.

48.

Rating the urgency of coronary angiography: results of an expert panel process. Ontario Coronary Angiography Panel.

Basinski AS, Almond DG, James RG, Naylor CD.

Can J Cardiol. 1993 May;9(4):313-21.

PMID:
8513424
49.

Quantitation of GLUT1 and GLUT4 mRNA using a solution hybridization assay.

Meier DA, Pastorek D, James RG, Hager SR.

Biochem Biophys Res Commun. 1991 Sep 30;179(3):1420-6.

PMID:
1930185
50.

Regional adipocyte precursors in the female rat. Influence of ovarian factors.

Krakower GR, James RG, Arnaud C, Etienne J, Keller RH, Kissebah AH.

J Clin Invest. 1988 Mar;81(3):641-8.

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