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Items: 1 to 50 of 71

1.

One-Pot Synthesis of Layered Disodium Zirconium Phosphate: Crystal Structure and Application in the Remediation of Heavy-Metal-Contaminated Wastewater.

Cheng Y, Chui SS, Wang XDT, Jaenicke S, Chuah GK.

Inorg Chem. 2019 Oct 7;58(19):13020-13029. doi: 10.1021/acs.inorgchem.9b01938. Epub 2019 Sep 11.

PMID:
31509399
2.

Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes.

Nelkner J, Henke C, Lin TW, Pätzold W, Hassa J, Jaenicke S, Grosch R, Pühler A, Sczyrba A, Schlüter A.

Genes (Basel). 2019 Jun 3;10(6). pii: E424. doi: 10.3390/genes10060424.

3.

A novel and environmental friendly synthetic route for hydroxypyrrolidines using zeolites.

Fan A, Chuah GK, Jaenicke S.

Carbohydr Res. 2019 Jan 15;472:103-114. doi: 10.1016/j.carres.2018.11.016. Epub 2018 Dec 4.

PMID:
30544044
4.

Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors.

Maus I, Rumming M, Bergmann I, Heeg K, Pohl M, Nettmann E, Jaenicke S, Blom J, Pühler A, Schlüter A, Sczyrba A, Klocke M.

Biotechnol Biofuels. 2018 Jun 19;11:167. doi: 10.1186/s13068-018-1162-4. eCollection 2018.

5.

A Dual-Functional Catalyst for Cascade Meerwein-Pondorf-Verley Reduction and Dehydration of 4'-Methoxypropiophenone to Anethole.

Zhang H, Lim CL, Zaki M, Jaenicke S, Chuah GK.

ChemSusChem. 2018 Sep 11;11(17):3007-3017. doi: 10.1002/cssc.201801340. Epub 2018 Jul 23.

PMID:
29927044
6.

Flexible metagenome analysis using the MGX framework.

Jaenicke S, Albaum SP, Blumenkamp P, Linke B, Stoye J, Goesmann A.

Microbiome. 2018 Apr 24;6(1):76. doi: 10.1186/s40168-018-0460-1.

7.

Mechanochemistry-Based Synthesis of Highly Crystalline γ-Zirconium Phosphate for Selective Ion Exchange.

Cheng Y, Dong Tony Wang X, Jaenicke S, Chuah GK.

Inorg Chem. 2018 Apr 16;57(8):4370-4378. doi: 10.1021/acs.inorgchem.7b03202. Epub 2018 Mar 23.

PMID:
29570290
8.

Reagent-controlled regiodivergent intermolecular cyclization of 2-aminobenzothiazoles with β-ketoesters and β-ketoamides.

Roslan II, Ng KH, Chuah GK, Jaenicke S.

Beilstein J Org Chem. 2017 Dec 18;13:2739-2750. doi: 10.3762/bjoc.13.270. eCollection 2017.

9.

Bioinformatics for NGS-based metagenomics and the application to biogas research.

Jünemann S, Kleinbölting N, Jaenicke S, Henke C, Hassa J, Nelkner J, Stolze Y, Albaum SP, Schlüter A, Goesmann A, Sczyrba A, Stoye J.

J Biotechnol. 2017 Nov 10;261:10-23. doi: 10.1016/j.jbiotec.2017.08.012. Epub 2017 Aug 18. Review.

10.

Efficient photodegradation of chlorophenols by BiOBr/NaBiO3 heterojunctioned composites under visible light.

Han A, Zhang H, Lu D, Sun J, Chuah GK, Jaenicke S.

J Hazard Mater. 2018 Jan 5;341:83-92. doi: 10.1016/j.jhazmat.2017.07.031. Epub 2017 Jul 16.

PMID:
28772252
11.

A review of bioinformatics platforms for comparative genomics. Recent developments of the EDGAR 2.0 platform and its utility for taxonomic and phylogenetic studies.

Yu J, Blom J, Glaeser SP, Jaenicke S, Juhre T, Rupp O, Schwengers O, Spänig S, Goesmann A.

J Biotechnol. 2017 Nov 10;261:2-9. doi: 10.1016/j.jbiotec.2017.07.010. Epub 2017 Jul 10. Review.

12.

Minimalistic Liquid-Assisted Route to Highly Crystalline α-Zirconium Phosphate.

Cheng Y, Wang XT, Jaenicke S, Chuah GK.

ChemSusChem. 2017 Aug 24;10(16):3235-3242. doi: 10.1002/cssc.201700885. Epub 2017 Jul 26.

PMID:
28665539
13.

Microbial diversity in different compartments of an aquaponics system.

Schmautz Z, Graber A, Jaenicke S, Goesmann A, Junge R, Smits TH.

Arch Microbiol. 2017 May;199(4):613-620. doi: 10.1007/s00203-016-1334-1. Epub 2017 Jan 10.

PMID:
28074233
14.

Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974T (ATCC 19319T).

Jaenicke S, Bunk B, Wibberg D, Spröer C, Hersemann L, Blom J, Winkler A, Schatschneider S, Albaum SP, Kölliker R, Goesmann A, Pühler A, Overmann J, Vorhölter FJ.

Genome Announc. 2016 Dec 1;4(6). pii: e01334-16. doi: 10.1128/genomeA.01334-16.

15.

ReadXplorer 2-detailed read mapping analysis and visualization from one single source.

Hilker R, Stadermann KB, Schwengers O, Anisiforov E, Jaenicke S, Weisshaar B, Zimmermann T, Goesmann A.

Bioinformatics. 2016 Dec 15;32(24):3702-3708. Epub 2016 Aug 18.

16.

Synthesis of Disubstituted 3-Phenylimidazo[1,2-a]pyridines via a 2-Aminopyridine/CBrCl3 α-Bromination Shuttle.

Roslan II, Ng KH, Wu JE, Chuah GK, Jaenicke S.

J Org Chem. 2016 Oct 7;81(19):9167-9174. Epub 2016 Sep 16.

PMID:
27606896
17.

Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates.

Maus I, Koeck DE, Cibis KG, Hahnke S, Kim YS, Langer T, Kreubel J, Erhard M, Bremges A, Off S, Stolze Y, Jaenicke S, Goesmann A, Sczyrba A, Scherer P, König H, Schwarz WH, Zverlov VV, Liebl W, Pühler A, Schlüter A, Klocke M.

Biotechnol Biofuels. 2016 Aug 11;9:171. doi: 10.1186/s13068-016-0581-3. eCollection 2016.

18.

Genomics of high molecular weight plasmids isolated from an on-farm biopurification system.

Martini MC, Wibberg D, Lozano M, Torres Tejerizo G, Albicoro FJ, Jaenicke S, van Elsas JD, Petroni A, Garcillán-Barcia MP, de la Cruz F, Schlüter A, Pühler A, Pistorio M, Lagares A, Del Papa MF.

Sci Rep. 2016 Jun 20;6:28284. doi: 10.1038/srep28284.

19.

An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant.

Ortseifen V, Stolze Y, Maus I, Sczyrba A, Bremges A, Albaum SP, Jaenicke S, Fracowiak J, Pühler A, Schlüter A.

J Biotechnol. 2016 Aug 10;231:268-279. doi: 10.1016/j.jbiotec.2016.06.014. Epub 2016 Jun 14.

PMID:
27312700
20.

Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria.

Gómez-Consarnau L, González JM, Riedel T, Jaenicke S, Wagner-Döbler I, Sañudo-Wilhelmy SA, Fuhrman JA.

ISME J. 2016 May;10(5):1102-12. doi: 10.1038/ismej.2015.196. Epub 2015 Nov 17.

21.

How the spontaneous insertion of amphiphilic imidazolium-based cations changes biological membranes: a molecular simulation study.

Lim GS, Jaenicke S, Klähn M.

Phys Chem Chem Phys. 2015 Nov 21;17(43):29171-83. doi: 10.1039/c5cp04806k.

PMID:
26466122
22.

Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise.

Rückert C, Kriete M, Jaenicke S, Winkler A, Tauch A.

Genome Announc. 2015 Jul 30;3(4). pii: e00784-15. doi: 10.1128/genomeA.00784-15.

23.

Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare.

Rückert C, Kriete M, Jaenicke S, Winkler A, Tauch A.

Genome Announc. 2015 Jul 30;3(4). pii: e00783-15. doi: 10.1128/genomeA.00783-15.

24.

Enhanced Photocatalytic Activity of the AgI/UiO-66(Zr) Composite for Rhodamine B Degradation under Visible-Light Irradiation.

Sha Z, Sun J, Chan HSO, Jaenicke S, Wu J.

Chempluschem. 2015 Aug;80(8):1321-1328. doi: 10.1002/cplu.201402430. Epub 2015 Mar 31.

PMID:
31973301
25.

The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms.

Rupp O, Brinkrolf K, Buerth C, Kunigo M, Schneider J, Jaenicke S, Goesmann A, Pühler A, Jaeger KE, Ernst JF.

J Biotechnol. 2015 Oct 10;211:20-30. doi: 10.1016/j.jbiotec.2015.06.423. Epub 2015 Jul 3.

PMID:
26150016
26.

Alumina-entrapped Ag catalyzed nitro compounds coupled with alcohols using borrowing hydrogen methodology.

Liu H, Chuah GK, Jaenicke S.

Phys Chem Chem Phys. 2015 Jun 14;17(22):15012-8. doi: 10.1039/c5cp00330j.

PMID:
25989446
27.

Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions.

Stolze Y, Zakrzewski M, Maus I, Eikmeyer F, Jaenicke S, Rottmann N, Siebner C, Pühler A, Schlüter A.

Biotechnol Biofuels. 2015 Feb 8;8:14. doi: 10.1186/s13068-014-0193-8. eCollection 2015.

28.

Complete genome sequence of Streptomyces lividans TK24.

Rückert C, Albersmeier A, Busche T, Jaenicke S, Winkler A, Friðjónsson ÓH, Hreggviðsson GÓ, Lambert C, Badcock D, Bernaerts K, Anne J, Economou A, Kalinowski J.

J Biotechnol. 2015 Apr 10;199:21-2. doi: 10.1016/j.jbiotec.2015.02.004. Epub 2015 Feb 11.

PMID:
25680930
29.

The Sinorhizobium fredii HH103 Genome: A Comparative Analysis With S. fredii Strains Differing in Their Symbiotic Behavior With Soybean.

Vinardell JM, Acosta-Jurado S, Zehner S, Göttfert M, Becker A, Baena I, Blom J, Crespo-Rivas JC, Goesmann A, Jaenicke S, Krol E, McIntosh M, Margaret I, Pérez-Montaño F, Schneiker-Bekel S, Serranía J, Szczepanowski R, Buendía AM, Lloret J, Bonilla I, Pühler A, Ruiz-Sainz JE, Weidner S.

Mol Plant Microbe Interact. 2015 Jul;28(7):811-24. doi: 10.1094/MPMI-12-14-0397-FI. Epub 2015 Jun 15.

30.

Impact of ionic liquids in aqueous solution on bacterial plasma membranes studied with molecular dynamics simulations.

Lim GS, Zidar J, Cheong DW, Jaenicke S, Klähn M.

J Phys Chem B. 2014 Sep 4;118(35):10444-59. doi: 10.1021/jp5060952. Epub 2014 Aug 25.

PMID:
25153890
31.

Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849.

Tippelt A, Möllmann S, Albersmeier A, Jaenicke S, Rückert C, Tauch A.

Genome Announc. 2014 Aug 21;2(4). pii: e00845-14. doi: 10.1128/genomeA.00845-14.

32.

Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria.

Klippel B, Sahm K, Basner A, Wiebusch S, John P, Lorenz U, Peters A, Abe F, Takahashi K, Kaiser O, Goesmann A, Jaenicke S, Grote R, Horikoshi K, Antranikian G.

Extremophiles. 2014 Sep;18(5):853-63. doi: 10.1007/s00792-014-0676-3. Epub 2014 Aug 10.

PMID:
25108363
33.

Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation.

Koeck DE, Wibberg D, Koellmeier T, Blom J, Jaenicke S, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Schlüter A.

J Biotechnol. 2013 Oct 10;168(1):62-3. doi: 10.1016/j.jbiotec.2013.08.011. Epub 2013 Aug 19.

PMID:
23968723
34.

Complete Genome Sequence of Corynebacterium urealyticum Strain DSM 7111, Isolated from a 9-Year-Old Patient with Alkaline-Encrusted Cystitis.

Guimarães LC, Soares SC, Albersmeier A, Blom J, Jaenicke S, Azevedo V, Soriano F, Tauch A, Trost E.

Genome Announc. 2013 May 23;1(3). pii: e00264-13. doi: 10.1128/genomeA.00264-13.

35.

Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms.

Eikmeyer FG, Rademacher A, Hanreich A, Hennig M, Jaenicke S, Maus I, Wibberg D, Zakrzewski M, Pühler A, Klocke M, Schlüter A.

Biotechnol Biofuels. 2013 Apr 4;6(1):49. doi: 10.1186/1754-6834-6-49.

36.

New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics.

Toepel J, Illmer-Kephalides M, Jaenicke S, Straube J, May P, Goesmann A, Kruse O.

Plant Biotechnol J. 2013 Aug;11(6):717-33. doi: 10.1111/pbi.12062. Epub 2013 Apr 3.

37.

Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study.

Roetzer A, Diel R, Kohl TA, Rückert C, Nübel U, Blom J, Wirth T, Jaenicke S, Schuback S, Rüsch-Gerdes S, Supply P, Kalinowski J, Niemann S.

PLoS Med. 2013;10(2):e1001387. doi: 10.1371/journal.pmed.1001387. Epub 2013 Feb 12.

38.

Mid-term follow up of a novel bioprosthesis in aortic valve surgery.

Doss M, Sirat S, Kiessling AH, Jaenicke S, Moritz A.

J Heart Valve Dis. 2012 Nov;21(6):753-7.

PMID:
23409357
39.

Genome Sequence of Sinorhizobium meliloti Rm41.

Weidner S, Baumgarth B, Göttfert M, Jaenicke S, Pühler A, Schneiker-Bekel S, Serrania J, Szczepanowski R, Becker A.

Genome Announc. 2013 Jan;1(1). pii: e00013-12. doi: 10.1128/genomeA.00013-12. Epub 2013 Jan 15.

40.

Draft genome sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10.

Schneider J, Andrea H, Blom J, Jaenicke S, Rückert C, Schorsch C, Szczepanowski R, Farwick M, Goesmann A, Pühler A, Schaffer S, Tauch A, Köhler T, Brinkrolf K.

Eukaryot Cell. 2012 Dec;11(12):1582-3. doi: 10.1128/EC.00258-12.

41.

Changes in root bacterial communities associated to two different development stages of canola (Brassica napus L. var oleifera) evaluated through next-generation sequencing technology.

de Campos SB, Youn JW, Farina R, Jaenicke S, Jünemann S, Szczepanowski R, Beneduzi A, Vargas LK, Goesmann A, Wendisch VF, Passaglia LM.

Microb Ecol. 2013 Apr;65(3):593-601. doi: 10.1007/s00248-012-0132-9. Epub 2012 Oct 12.

PMID:
23064947
42.

Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.

Luque-Almagro VM, Acera F, Igeño MI, Wibberg D, Roldán MD, Sáez LP, Hennig M, Quesada A, Huertas MJ, Blom J, Merchán F, Escribano MP, Jaenicke S, Estepa J, Guijo MI, Martínez-Luque M, Macías D, Szczepanowski R, Becerra G, Ramirez S, Carmona MI, Gutiérrez O, Manso I, Pühler A, Castillo F, Moreno-Vivián C, Schlüter A, Blasco R.

Environ Microbiol. 2013 Jan;15(1):253-70. doi: 10.1111/j.1462-2920.2012.02875.x. Epub 2012 Sep 24.

PMID:
22998548
43.

Complete genome sequence of the hydrogenotrophic, methanogenic archaeon Methanoculleus bourgensis strain MS2(T), Isolated from a sewage sludge digester.

Maus I, Wibberg D, Stantscheff R, Eikmeyer FG, Seffner A, Boelter J, Szczepanowski R, Blom J, Jaenicke S, König H, Pühler A, Schlüter A.

J Bacteriol. 2012 Oct;194(19):5487-8. doi: 10.1128/JB.01292-12.

44.

Genome sequence of the filamentous bacterium Fibrisoma limi BUZ 3T.

Filippini M, Qi W, Jaenicke S, Goesmann A, Smits TH, Bagheri HC.

J Bacteriol. 2012 Aug;194(16):4445. doi: 10.1128/JB.00869-12.

45.

Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties.

Dohrmann AB, Küting M, Jünemann S, Jaenicke S, Schlüter A, Tebbe CC.

ISME J. 2013 Jan;7(1):37-49. doi: 10.1038/ismej.2012.77. Epub 2012 Jul 12.

46.

Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient.

Schröder J, Maus I, Meyer K, Wördemann S, Blom J, Jaenicke S, Schneider J, Trost E, Tauch A.

BMC Genomics. 2012 Apr 23;13:141. doi: 10.1186/1471-2164-13-141.

47.

Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia.

Trost E, Blom J, Soares Sde C, Huang IH, Al-Dilaimi A, Schröder J, Jaenicke S, Dorella FA, Rocha FS, Miyoshi A, Azevedo V, Schneider MP, Silva A, Camello TC, Sabbadini PS, Santos CS, Santos LS, Hirata R Jr, Mattos-Guaraldi AL, Efstratiou A, Schmitt MP, Ton-That H, Tauch A.

J Bacteriol. 2012 Jun;194(12):3199-215. doi: 10.1128/JB.00183-12. Epub 2012 Apr 13.

48.

Genome sequence of the soybean symbiont Sinorhizobium fredii HH103.

Weidner S, Becker A, Bonilla I, Jaenicke S, Lloret J, Margaret I, Pühler A, Ruiz-Sainz JE, Schneiker-Bekel S, Szczepanowski R, Vinardell JM, Zehner S, Göttfert M.

J Bacteriol. 2012 Mar;194(6):1617-8. doi: 10.1128/JB.06729-11.

49.

Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing.

Zakrzewski M, Goesmann A, Jaenicke S, Jünemann S, Eikmeyer F, Szczepanowski R, Al-Soud WA, Sørensen S, Pühler A, Schlüter A.

J Biotechnol. 2012 Apr 30;158(4):248-58. doi: 10.1016/j.jbiotec.2012.01.020. Epub 2012 Feb 8.

PMID:
22342600
50.

Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities.

Schneider J, Rupp O, Trost E, Jaenicke S, Passoth V, Goesmann A, Tauch A, Brinkrolf K.

FEMS Yeast Res. 2012 May;12(3):382-6. doi: 10.1111/j.1567-1364.2012.00791.x. Epub 2012 Feb 23.

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