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Complete Chloroplast Genome Sequence of an Engelmann Spruce (Picea engelmannii, Genotype Se404-851) from Western Canada.

Lin D, Coombe L, Jackman SD, Gagalova KK, Warren RL, Hammond SA, McDonald H, Kirk H, Pandoh P, Zhao Y, Moore RA, Mungall AJ, Ritland C, Doerksen T, Jaquish B, Bousquet J, Jones SJM, Bohlmann J, Birol I.

Microbiol Resour Announc. 2019 Jun 13;8(24). pii: e00382-19. doi: 10.1128/MRA.00382-19.


Complete Chloroplast Genome Sequence of a White Spruce (Picea glauca, Genotype WS77111) from Eastern Canada.

Lin D, Coombe L, Jackman SD, Gagalova KK, Warren RL, Hammond SA, Kirk H, Pandoh P, Zhao Y, Moore RA, Mungall AJ, Ritland C, Jaquish B, Isabel N, Bousquet J, Jones SJM, Bohlmann J, Birol I.

Microbiol Resour Announc. 2019 Jun 6;8(23). pii: e00381-19. doi: 10.1128/MRA.00381-19.


Nonclinical Safety Assessment of a Long-Acting Recombinant PEGylated Factor Eight (BAY 94-9027) With a 60 kDa PEG.

Ivens IA, Banczyk D, Gutberlet K, Jackman S, Vauléon S, Frisk AL.

Toxicol Pathol. 2019 May 27:192623319852300. doi: 10.1177/0192623319852300. [Epub ahead of print]


ORCA: A Comprehensive Bioinformatics Container Environment for Education and Research.

Jackman SD, Mozgacheva T, Chen S, O'Huiginn B, Bailey L, Birol I, Jones SJM.

Bioinformatics. 2019 Apr 20. pii: btz278. doi: 10.1093/bioinformatics/btz278. [Epub ahead of print]


In Vivo Targeted Expression of Optogenetic Proteins Using Silk/AAV Films.

Jackman SL, Chen CH, Regehr WG.

J Vis Exp. 2019 Feb 26;(144). doi: 10.3791/58728.


Defining a clinically significant struvite stone: a non-randomized retrospective study.

Nevo A, Shahait M, Shah A, Jackman S, Averch T.

Int Urol Nephrol. 2019 Apr;51(4):585-591. doi: 10.1007/s11255-019-02117-1. Epub 2019 Mar 4.


Antimicrobial peptides from Rana [Lithobates] catesbeiana: Gene structure and bioinformatic identification of novel forms from tadpoles.

Helbing CC, Hammond SA, Jackman SH, Houston S, Warren RL, Cameron CE, Birol I.

Sci Rep. 2019 Feb 6;9(1):1529. doi: 10.1038/s41598-018-38442-1.


The Genome of the North American Brown Bear or Grizzly: Ursus arctos ssp. horribilis.

Taylor GA, Kirk H, Coombe L, Jackman SD, Chu J, Tse K, Cheng D, Chuah E, Pandoh P, Carlsen R, Zhao Y, Mungall AJ, Moore R, Birol I, Franke M, Marra MA, Dutton C, Jones SJM.

Genes (Basel). 2018 Nov 30;9(12). pii: E598. doi: 10.3390/genes9120598.


Montmorency cherry supplementation attenuates vascular dysfunction induced by prolonged forearm occlusion in overweight, middle-aged men.

Aboo Bakkar Z, Fulford J, Gates PE, Jackman SR, Jones AM, Bond B, Bowtell JL.

J Appl Physiol (1985). 2019 Jan 1;126(1):246-254. doi: 10.1152/japplphysiol.00804.2018. Epub 2018 Nov 29.


Flavanol-Rich Cacao Mucilage Juice Enhances Recovery of Power but Not Strength from Intensive Exercise in Healthy, Young Men.

Morgan PT, Wollman PM, Jackman SR, Bowtell JL.

Sports (Basel). 2018 Nov 28;6(4). pii: E159. doi: 10.3390/sports6040159.


Tigmint: correcting assembly errors using linked reads from large molecules.

Jackman SD, Coombe L, Chu J, Warren RL, Vandervalk BP, Yeo S, Xue Z, Mohamadi H, Bohlmann J, Jones SJM, Birol I.

BMC Bioinformatics. 2018 Oct 26;19(1):393. doi: 10.1186/s12859-018-2425-6.


Blocking slow exocytosis with slow Ca2+ buffers slows recovery from depression.

Jackman S, von Gersdorff H.

J Physiol. 2018 Oct;596(19):4555-4557. doi: 10.1113/JP276673. Epub 2018 Aug 31. No abstract available.


ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers.

Coombe L, Zhang J, Vandervalk BP, Chu J, Jackman SD, Birol I, Warren RL.

BMC Bioinformatics. 2018 Jun 20;19(1):234. doi: 10.1186/s12859-018-2243-x.


Effect of Tamsulosin on Passage of Symptomatic Ureteral Stones: A Randomized Clinical Trial.

Meltzer AC, Burrows PK, Wolfson AB, Hollander JE, Kurz M, Kirkali Z, Kusek JW, Mufarrij P, Jackman SV, Brown J.

JAMA Intern Med. 2018 Aug 1;178(8):1051-1057. doi: 10.1001/jamainternmed.2018.2259.


Tart cherry concentrate does not enhance muscle protein synthesis response to exercise and protein in healthy older men.

Jackman SR, Brook MS, Pulsford RM, Cockcroft EJ, Campbell MI, Rankin D, Atherton P, Smith K, Bowtell JL.

Exp Gerontol. 2018 Sep;110:202-208. doi: 10.1016/j.exger.2018.06.007. Epub 2018 Jun 8.


The high-affinity calcium sensor synaptotagmin-7 serves multiple roles in regulated exocytosis.

MacDougall DD, Lin Z, Chon NL, Jackman SL, Lin H, Knight JD, Anantharam A.

J Gen Physiol. 2018 Jun 4;150(6):783-807. doi: 10.1085/jgp.201711944. Epub 2018 May 24. Review.


Prolonged forearm ischemia attenuates endothelium-dependent vasodilatation and plasma nitric oxide metabolites in overweight middle-aged men.

Aboo Bakkar Z, Fulford J, Gates PE, Jackman SR, Jones AM, Bond B, Bowtell JL.

Eur J Appl Physiol. 2018 Aug;118(8):1565-1572. doi: 10.1007/s00421-018-3886-z. Epub 2018 May 21.


Response to Hamilton et al. re: Conservative Management of Staghorn Calculi: When Is It Safe? by Morgan et al.

Morgan TN, Shahait M, Maganty A, Ost M, Jackman S, Averch T, Semins MJ.

J Endourol. 2018 Jun;32(6):547. doi: 10.1089/end.2018.29038.mor. Epub 2018 May 21. No abstract available.


A single day of bed rest, irrespective of energy balance, does not affect skeletal muscle gene expression or insulin sensitivity.

Dirks ML, Stephens FB, Jackman SR, Galera Gordo J, Machin DJ, Pulsford RM, van Loon LJC, Wall BT.

Exp Physiol. 2018 Jun;103(6):860-875. doi: 10.1113/EP086961.


Silk Fibroin Films Facilitate Single-Step Targeted Expression of Optogenetic Proteins.

Jackman SL, Chen CH, Chettih SN, Neufeld SQ, Drew IR, Agba CK, Flaquer I, Stefano AN, Kennedy TJ, Belinsky JE, Roberston K, Beron CC, Sabatini BL, Harvey CD, Regehr WG.

Cell Rep. 2018 Mar 20;22(12):3351-3361. doi: 10.1016/j.celrep.2018.02.081.


Conservative Management of Staghorn Calculi: When Is It Safe?

Morgan TN, Shahait M, Maganty A, Ost M, Jackman S, Averch T, Semins MJ.

J Endourol. 2018 Jun;32(6):541-545. doi: 10.1089/end.2018.0002. Epub 2018 Apr 5.


Improved Exercise Tolerance with Caffeine Is Associated with Modulation of both Peripheral and Central Neural Processes in Human Participants.

Bowtell JL, Mohr M, Fulford J, Jackman SR, Ermidis G, Krustrup P, Mileva KN.

Front Nutr. 2018 Feb 12;5:6. doi: 10.3389/fnut.2018.00006. eCollection 2018.


Synaptotagmin 7 confers frequency invariance onto specialized depressing synapses.

Turecek J, Jackman SL, Regehr WG.

Nature. 2017 Nov 23;551(7681):503-506. doi: 10.1038/nature24474. Epub 2017 Oct 30.


Exploring functional outcomes and allied health staffing levels in an inpatient paediatric rehabilitation unit.

Ireland PJ, Francis A, Jackman S, McLennan K.

Disabil Rehabil. 2019 Feb;41(3):293-298. doi: 10.1080/09638288.2017.1387293. Epub 2017 Oct 10.


Acute Exercise and Insulin Sensitivity in Boys: A Time-Course Study.

Cockcroft EJ, Williams CA, Weaver H, O'Connor A, Jackman SR, Armstrong N, Barker AR.

Int J Sports Med. 2017 Nov;38(13):967-974. doi: 10.1055/s-0043-118007. Epub 2017 Oct 1.


The Efficacy of Tadalafil Daily vs on Demand in the Treatment of Erectile Dysfunction: A Systematic Review and Meta-analysis.

Bansal UK, Jones C, Fuller TW, Wessel C, Jackman SV.

Urology. 2018 Feb;112:6-11. doi: 10.1016/j.urology.2017.08.031. Epub 2017 Sep 4.


Branched-Chain Amino Acid Ingestion Stimulates Muscle Myofibrillar Protein Synthesis following Resistance Exercise in Humans.

Jackman SR, Witard OC, Philp A, Wallis GA, Baar K, Tipton KD.

Front Physiol. 2017 Jun 7;8:390. doi: 10.3389/fphys.2017.00390. eCollection 2017.


Ten Questions With ….

Jackman S.

Biomed Instrum Technol. 2017 May/Jun;51(3):183. doi: 10.2345/0899-8205-51.3.183. No abstract available.


Agreement and Reliability of Fasted and Oral Glucose Tolerance Test-Derived Indices of Insulin Sensitivity and Beta Cell Function in Boys.

Cockcroft EJ, Williams CA, Jackman SR, Armstrong N, Barker AR.

Int J Sports Med. 2017 Jun;38(6):411-417. doi: 10.1055/s-0043-104932. Epub 2017 May 8.


The Mechanisms and Functions of Synaptic Facilitation.

Jackman SL, Regehr WG.

Neuron. 2017 May 3;94(3):447-464. doi: 10.1016/j.neuron.2017.02.047. Review.


A single bout of high-intensity interval exercise and work-matched moderate-intensity exercise has minimal effect on glucose tolerance and insulin sensitivity in 7- to 10-year-old boys.

Cockcroft EJ, Williams CA, Jackman SR, Bassi S, Armstrong N, Barker AR.

J Sports Sci. 2018 Jan;36(2):149-155. doi: 10.1080/02640414.2017.1287934. Epub 2017 Feb 13.


ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter.

Jackman SD, Vandervalk BP, Mohamadi H, Chu J, Yeo S, Hammond SA, Jahesh G, Khan H, Coombe L, Warren RL, Birol I.

Genome Res. 2017 May;27(5):768-777. doi: 10.1101/gr.214346.116. Epub 2017 Feb 23.


Short Duration Small Sided Football and to a Lesser Extent Whole Body Vibration Exercise Induce Acute Changes in Markers of Bone Turnover.

Bowtell JL, Jackman SR, Scott S, Connolly LJ, Mohr M, Ermidis G, Julian R, Yousefian F, Helge EW, Jørgensen NR, Fulford J, Knapp KM, Krustrup P.

Biomed Res Int. 2016;2016:3574258. doi: 10.1155/2016/3574258. Epub 2016 Nov 29.


Synaptic Specializations Support Frequency-Independent Purkinje Cell Output from the Cerebellar Cortex.

Turecek J, Jackman SL, Regehr WG.

Cell Rep. 2016 Dec 20;17(12):3256-3268. doi: 10.1016/j.celrep.2016.11.081.


Appearance of Pyelitis Emphysematosa on Computed Tomography.

Yecies TS, Kadow BT, Jackman SV.

Urology. 2017 Mar;101:e3-e4. doi: 10.1016/j.urology.2016.12.013. Epub 2016 Dec 16.


Design and challenges of a randomized clinical trial of medical expulsive therapy (tamsulosin) for urolithiasis in the emergency department.

Burrows PK, Hollander JE, Wolfson AB, Kurz MC, Richards L, DiFiore S, Watts P, Patkar N, Brown J, Jackman S, Kirkali Z, Kusek JW, Michel C, Meltzer AC; STONE Study Investigators.

Contemp Clin Trials. 2017 Jan;52:91-94. doi: 10.1016/j.cct.2016.11.010. Epub 2016 Nov 23.


A Roundtable Discussion: Wireless Technology Poses Unique Challenges for Healthcare.

Logan MK, Berger HS, Jackman S, Keltz I, Knapp J, LaSorte N, Sayle R, Sproul C, Witters D, Youssef A.

Biomed Instrum Technol. 2016 Sep;50(s6):6-17. No abstract available.


Dispelling Wireless Technology Myths and Developing a Roadmap for Success.

Jackman S.

Biomed Instrum Technol. 2016 Sep;50(s6):27-36. No abstract available.


Visualisation of Kiss1 Neurone Distribution Using a Kiss1-CRE Transgenic Mouse.

Yeo SH, Kyle V, Morris PG, Jackman S, Sinnett-Smith LC, Schacker M, Chen C, Colledge WH.

J Neuroendocrinol. 2016 Nov;28(11). doi: 10.1111/jne.12435.


Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics' GemCode Sequencing Data.

Coombe L, Warren RL, Jackman SD, Yang C, Vandervalk BP, Moore RA, Pleasance S, Coope RJ, Bohlmann J, Holt RA, Jones SJ, Birol I.

PLoS One. 2016 Sep 15;11(9):e0163059. doi: 10.1371/journal.pone.0163059. eCollection 2016.


Evolution of Specialization of Cassida rubiginosa on Cirsium arvense (Compositae, Cardueae).

Cripps MG, Jackman SD, Roquet C, van Koten C, Rostás M, Bourdôt GW, Susanna A.

Front Plant Sci. 2016 Aug 23;7:1261. doi: 10.3389/fpls.2016.01261. eCollection 2016.


Severe emphysematous cystitis: Images in urology.

Bandari J, Yecies TS, Jackman S.

Can Urol Assoc J. 2015 Nov-Dec;9(11-12):371. doi: 10.5489/cuaj.3254. Epub 2015 Dec 14. No abstract available.


The calcium sensor synaptotagmin 7 is required for synaptic facilitation.

Jackman SL, Turecek J, Belinsky JE, Regehr WG.

Nature. 2016 Jan 7;529(7584):88-91. doi: 10.1038/nature16507.


Editorial Comment.

Slater RC, Jackman SV.

Urology. 2015 Dec;86(6):1102. doi: 10.1016/j.urology.2015.06.054. No abstract available.


Effect of Intensive Training on Mood With No Effect on Brain-Derived Neurotrophic Factor.

Piacentini MF, Witard OC, Tonoli C, Jackman SR, Turner JE, Kies AK, Jeukendrup AE, Tipton KD, Meeusen R.

Int J Sports Physiol Perform. 2016 Sep;11(6):824-830. Epub 2016 Aug 24.


Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation.

Jackman SD, Warren RL, Gibb EA, Vandervalk BP, Mohamadi H, Chu J, Raymond A, Pleasance S, Coope R, Wildung MR, Ritland CE, Bousquet J, Jones SJ, Bohlmann J, Birol I.

Genome Biol Evol. 2015 Dec 8;8(1):29-41. doi: 10.1093/gbe/evv244.


Spaced Seed Data Structures for De Novo Assembly.

Birol I, Chu J, Mohamadi H, Jackman SD, Raghavan K, Vandervalk BP, Raymond A, Warren RL.

Int J Genomics. 2015;2015:196591. doi: 10.1155/2015/196591. Epub 2015 Oct 11.


Konnector v2.0: pseudo-long reads from paired-end sequencing data.

Vandervalk BP, Yang C, Xue Z, Raghavan K, Chu J, Mohamadi H, Jackman SD, Chiu R, Warren RL, Birol I.

BMC Med Genomics. 2015;8 Suppl 3:S1. doi: 10.1186/1755-8794-8-S3-S1. Epub 2015 Sep 23.


Urinary Bladder Paraganglioma: AIRP Best Cases in Radiologic-Pathologic Correlation.

Loveys FW, Pushpanathan C, Jackman S.

Radiographics. 2015 Sep-Oct;35(5):1433-8. doi: 10.1148/rg.2015140303. Epub 2015 Aug 18. Review. No abstract available.


Two weeks of high-intensity interval training improves novel but not traditional cardiovascular disease risk factors in adolescents.

Bond B, Cockcroft EJ, Williams CA, Harris S, Gates PE, Jackman SR, Armstrong N, Barker AR.

Am J Physiol Heart Circ Physiol. 2015 Sep 15;309(6):H1039-47. doi: 10.1152/ajpheart.00360.2015. Epub 2015 Aug 7.

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