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Items: 14

1.

Erratum for Briese et al., "Virome Capture Sequencing Enables Sensitive Viral Diagnosis and Comprehensive Virome Analysis".

Briese T, Kapoor A, Mishra N, Jain K, Kumar A, Jabado OJ, Lipkin WI.

MBio. 2017 May 16;8(3). pii: e00615-17. doi: 10.1128/mBio.00615-17. No abstract available.

2.

An acetyltransferase-independent function of Eso1 regulates centromere cohesion.

Lin SJ, Tapia-Alveal C, Jabado OJ, Germain D, O'Connell MJ.

Mol Biol Cell. 2016 Dec 15;27(25):4002-4010. Epub 2016 Oct 19.

3.

Virome Capture Sequencing Enables Sensitive Viral Diagnosis and Comprehensive Virome Analysis.

Briese T, Kapoor A, Mishra N, Jain K, Kumar A, Jabado OJ, Lipkin WI.

MBio. 2015 Sep 22;6(5):e01491-15. doi: 10.1128/mBio.01491-15. Erratum in: MBio. 2017 May 16;8(3):.

4.

Deep sequencing identifies noncanonical editing of Ebola and Marburg virus RNAs in infected cells.

Shabman RS, Jabado OJ, Mire CE, Stockwell TB, Edwards M, Mahajan M, Geisbert TW, Basler CF.

MBio. 2014 Nov 4;5(6):e02011. doi: 10.1128/mBio.02011-14.

5.

Visual displays that directly interface and provide read-outs of molecular states via molecular graphics processing units.

Poje JE, Kastratovic T, Macdonald AR, Guillermo AC, Troetti SE, Jabado OJ, Fanning ML, Stefanovic D, Macdonald J.

Angew Chem Int Ed Engl. 2014 Aug 25;53(35):9222-5. doi: 10.1002/anie.201402698. Epub 2014 Jul 9.

PMID:
25044570
6.

Middle East respiratory syndrome coronavirus quasispecies that include homologues of human isolates revealed through whole-genome analysis and virus cultured from dromedary camels in Saudi Arabia.

Briese T, Mishra N, Jain K, Zalmout IS, Jabado OJ, Karesh WB, Daszak P, Mohammed OB, Alagaili AN, Lipkin WI.

MBio. 2014 Apr 29;5(3):e01146-14. doi: 10.1128/mBio.01146-14.

7.

H2A.Z-dependent regulation of cohesin dynamics on chromosome arms.

Tapia-Alveal C, Lin SJ, Yeoh A, Jabado OJ, O'Connell MJ.

Mol Cell Biol. 2014 Jun;34(11):2092-104. doi: 10.1128/MCB.00193-14. Epub 2014 Mar 31.

8.

Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing.

Fang G, Munera D, Friedman DI, Mandlik A, Chao MC, Banerjee O, Feng Z, Losic B, Mahajan MC, Jabado OJ, Deikus G, Clark TA, Luong K, Murray IA, Davis BM, Keren-Paz A, Chess A, Roberts RJ, Korlach J, Turner SW, Kumar V, Waldor MK, Schadt EE.

Nat Biotechnol. 2012 Dec;30(12):1232-9. doi: 10.1038/nbt.2432. Epub 2012 Nov 8. Erratum in: Nat Biotechnol. 2013 Jun;31(6):566.

9.

Molecular characterization of severe and mild cases of influenza A (H1N1) 2009 strain from Argentina.

Baumeister E, Palacios G, Cisterna D, Solovyov A, Hui J, Savji N, Bussetti AV, Campos A, Pontoriero A, Jabado OJ, Street C, Hirschberg DL, Rabadan R, Alonio V, Molina V, Hutchison S, Egholm M, Lipkin WI.

Medicina (B Aires). 2010;70(6):518-23.

10.

Nonparametric methods for the analysis of single-color pathogen microarrays.

Jabado OJ, Conlan S, Quan PL, Hui J, Palacios G, Hornig M, Briese T, Lipkin WI.

BMC Bioinformatics. 2010 Jun 28;11:354. doi: 10.1186/1471-2105-11-354.

11.

Comprehensive viral oligonucleotide probe design using conserved protein regions.

Jabado OJ, Liu Y, Conlan S, Quan PL, Hegyi H, Lussier Y, Briese T, Palacios G, Lipkin WI.

Nucleic Acids Res. 2008 Jan;36(1):e3. Epub 2007 Dec 13.

12.

Detection of respiratory viruses and subtype identification of influenza A viruses by GreeneChipResp oligonucleotide microarray.

Quan PL, Palacios G, Jabado OJ, Conlan S, Hirschberg DL, Pozo F, Jack PJ, Cisterna D, Renwick N, Hui J, Drysdale A, Amos-Ritchie R, Baumeister E, Savy V, Lager KM, Richt JA, Boyle DB, García-Sastre A, Casas I, Perez-Breña P, Briese T, Lipkin WI.

J Clin Microbiol. 2007 Aug;45(8):2359-64. Epub 2007 Jun 6.

13.

Panmicrobial oligonucleotide array for diagnosis of infectious diseases.

Palacios G, Quan PL, Jabado OJ, Conlan S, Hirschberg DL, Liu Y, Zhai J, Renwick N, Hui J, Hegyi H, Grolla A, Strong JE, Towner JS, Geisbert TW, Jahrling PB, Büchen-Osmond C, Ellerbrok H, Sanchez-Seco MP, Lussier Y, Formenty P, Nichol MS, Feldmann H, Briese T, Lipkin WI.

Emerg Infect Dis. 2007 Jan;13(1):73-81.

14.

Greene SCPrimer: a rapid comprehensive tool for designing degenerate primers from multiple sequence alignments.

Jabado OJ, Palacios G, Kapoor V, Hui J, Renwick N, Zhai J, Briese T, Lipkin WI.

Nucleic Acids Res. 2006;34(22):6605-11. Epub 2006 Nov 28.

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