Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 128

1.

Author Correction: Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes.

Roux S, Krupovic M, Daly RA, Borges AL, Nayfach S, Schulz F, Sharrar A, Matheus Carnevali PB, Cheng JF, Ivanova NN, Bondy-Denomy J, Wrighton KC, Woyke T, Visel A, Kyrpides NC, Eloe-Fadrosh EA.

Nat Microbiol. 2020 Mar;5(3):527. doi: 10.1038/s41564-020-0681-5.

2.

Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome.

Bell TH, Trexler RV, Peng X, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Ivanova NN, Kyrpides NC, Pennacchio C, Eloe-Fadrosh EA, Bruns MA.

Microbiol Resour Announc. 2020 Jan 2;9(1). pii: e01361-19. doi: 10.1128/MRA.01361-19.

3.

Diversity, evolution, and classification of virophages uncovered through global metagenomics.

Paez-Espino D, Zhou J, Roux S, Nayfach S, Pavlopoulos GA, Schulz F, McMahon KD, Walsh D, Woyke T, Ivanova NN, Eloe-Fadrosh EA, Tringe SG, Kyrpides NC.

Microbiome. 2019 Dec 10;7(1):157. doi: 10.1186/s40168-019-0768-5.

4.

IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase.

Palaniappan K, Chen IA, Chu K, Ratner A, Seshadri R, Kyrpides NC, Ivanova NN, Mouncey NJ.

Nucleic Acids Res. 2020 Jan 8;48(D1):D422-D430. doi: 10.1093/nar/gkz932.

PMID:
31665416
5.

Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials.

Högfors-Rönnholm E, Lopez-Fernandez M, Christel S, Brambilla D, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Harmon-Smith M, Eloe-Fadrosh EA, Lundin D, Engblom S, Dopson M.

Sci Data. 2019 Oct 16;6(1):207. doi: 10.1038/s41597-019-0222-3.

6.

Microbiomes of Velloziaceae from phosphorus-impoverished soils of the campos rupestres, a biodiversity hotspot.

Camargo AP, de Souza RSC, de Britto Costa P, Gerhardt IR, Dante RA, Teodoro GS, Abrahão A, Lambers H, Carazzolle MF, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Pennacchio C, Eloe-Fadrosh EA, Arruda P, Oliveira RS.

Sci Data. 2019 Jul 31;6(1):140. doi: 10.1038/s41597-019-0141-3.

7.

Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes.

Roux S, Krupovic M, Daly RA, Borges AL, Nayfach S, Schulz F, Sharrar A, Matheus Carnevali PB, Cheng JF, Ivanova NN, Bondy-Denomy J, Wrighton KC, Woyke T, Visel A, Kyrpides NC, Eloe-Fadrosh EA.

Nat Microbiol. 2019 Nov;4(11):1895-1906. doi: 10.1038/s41564-019-0510-x. Epub 2019 Jul 22. Erratum in: Nat Microbiol. 2020 Mar;5(3):527.

8.

Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom.

Nowinski B, Smith CB, Thomas CM, Esson K, Marin R 3rd, Preston CM, Birch JM, Scholin CA, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Whitman WB, Kiene RP, Eloe-Fadrosh EA, Moran MA.

Sci Data. 2019 Jul 22;6(1):129. doi: 10.1038/s41597-019-0132-4.

9.

[Pineapple juice nutritional profile].

Ivanova NN, Khomich LM, Perova IB, Eller KI.

Vopr Pitan. 2019;88(2):73-82. doi: 10.24411/0042-8833-2019-10020. Epub 2019 Mar 13. Russian.

PMID:
31233691
10.

[Grape juice nutritional profile].

Ivanova NN, Khomich LM, Perova IB, Eller KI.

Vopr Pitan. 2018;87(6):95-105. doi: 10.24411/0042-8833-2018-10046. Epub 2018 Nov 13. Russian.

PMID:
30763495
11.

[Grapefruit juice nutritional profile].

Ivanova NN, Khomich LM, Perova IB, Eller KI.

Vopr Pitan. 2018;87(5):85-94. doi: 10.24411/0042-8833-2018-10057. Epub 2018 Sep 13. Russian.

PMID:
30592894
12.

[Tomato juice nutritional profile].

Ivanova NN, Khomich LM, Beketova NA.

Vopr Pitan. 2018;87(2):53-64. doi: 10.24411/0042-8833-2018-10019. Epub 2018 Feb 26. Russian.

PMID:
30592869
13.

[Sour cherry juice nutritional profile].

Ivanova NN, Khomich LM, Perova IB, Eller KI.

Vopr Pitan. 2018;87(4):78-86. doi: 10.24411/0042-8833-2018-10045. Epub 2018 Jul 13. Russian.

PMID:
30570961
14.

Minimum Information about an Uncultivated Virus Genome (MIUViG).

Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M, Kuhn JH, Lavigne R, Brister JR, Varsani A, Amid C, Aziz RK, Bordenstein SR, Bork P, Breitbart M, Cochrane GR, Daly RA, Desnues C, Duhaime MB, Emerson JB, Enault F, Fuhrman JA, Hingamp P, Hugenholtz P, Hurwitz BL, Ivanova NN, Labonté JM, Lee KB, Malmstrom RR, Martinez-Garcia M, Mizrachi IK, Ogata H, Páez-Espino D, Petit MA, Putonti C, Rattei T, Reyes A, Rodriguez-Valera F, Rosario K, Schriml L, Schulz F, Steward GF, Sullivan MB, Sunagawa S, Suttle CA, Temperton B, Tringe SG, Thurber RV, Webster NS, Whiteson KL, Wilhelm SW, Wommack KE, Woyke T, Wrighton KC, Yilmaz P, Yoshida T, Young MJ, Yutin N, Allen LZ, Kyrpides NC, Eloe-Fadrosh EA.

Nat Biotechnol. 2019 Jan;37(1):29-37. doi: 10.1038/nbt.4306. Epub 2018 Dec 17.

15.

IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes.

Paez-Espino D, Roux S, Chen IA, Palaniappan K, Ratner A, Chu K, Huntemann M, Reddy TBK, Pons JC, Llabrés M, Eloe-Fadrosh EA, Ivanova NN, Kyrpides NC.

Nucleic Acids Res. 2019 Jan 8;47(D1):D678-D686. doi: 10.1093/nar/gky1127.

16.

IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes.

Chen IA, Chu K, Palaniappan K, Pillay M, Ratner A, Huang J, Huntemann M, Varghese N, White JR, Seshadri R, Smirnova T, Kirton E, Jungbluth SP, Woyke T, Eloe-Fadrosh EA, Ivanova NN, Kyrpides NC.

Nucleic Acids Res. 2019 Jan 8;47(D1):D666-D677. doi: 10.1093/nar/gky901.

17.

Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis.

Jarett JK, Nayfach S, Podar M, Inskeep W, Ivanova NN, Munson-McGee J, Schulz F, Young M, Jay ZJ, Beam JP, Kyrpides NC, Malmstrom RR, Stepanauskas R, Woyke T.

Microbiome. 2018 Sep 17;6(1):161. doi: 10.1186/s40168-018-0539-8.

18.

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C; Genome Standards Consortium, Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM, Schriml L, Banfield JF, Hugenholtz P, Woyke T.

Nat Biotechnol. 2018 Jul 6;36(7):660. doi: 10.1038/nbt0718-660a. No abstract available.

PMID:
29979671
19.

Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.

Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators, Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ.

Nat Biotechnol. 2018 Apr;36(4):359-367. doi: 10.1038/nbt.4110. Epub 2018 Mar 19.

20.

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes.

Hahnke RL, Meier-Kolthoff JP, García-López M, Mukherjee S, Huntemann M, Ivanova NN, Woyke T, Kyrpides NC, Klenk HP, Göker M.

Front Microbiol. 2018 Feb 21;9:304. doi: 10.3389/fmicb.2018.00304. eCollection 2018.

21.

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C; Genome Standards Consortium, Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM, Schriml L, Banfield JF, Hugenholtz P, Woyke T.

Nat Biotechnol. 2018 Feb 6;36(2):196. doi: 10.1038/nbt0218-196a. No abstract available.

22.

Correction to: Towards a balanced view of the bacterial tree of life.

Schulz F, Eloe-Fadrosh EA, Bowers RM, Jarett J, Nielsen T, Ivanova NN, Kyrpides NC, Woyke T.

Microbiome. 2017 Nov 15;5(1):149. doi: 10.1186/s40168-017-0367-2.

23.

Towards a balanced view of the bacterial tree of life.

Schulz F, Eloe-Fadrosh EA, Bowers RM, Jarett J, Nielsen T, Ivanova NN, Kyrpides NC, Woyke T.

Microbiome. 2017 Oct 17;5(1):140. doi: 10.1186/s40168-017-0360-9. Erratum in: Microbiome. 2017 Nov 15;5(1):149.

24.

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C; Genome Standards Consortium, Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM, Schriml L, Banfield JF, Hugenholtz P, Woyke T.

Nat Biotechnol. 2017 Aug 8;35(8):725-731. doi: 10.1038/nbt.3893. Erratum in: Nat Biotechnol. 2018 Feb 6;36(2):196. Nat Biotechnol. 2018 Jul 6;36(7):660.

25.

Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data.

Paez-Espino D, Pavlopoulos GA, Ivanova NN, Kyrpides NC.

Nat Protoc. 2017 Aug;12(8):1673-1682. doi: 10.1038/nprot.2017.063. Epub 2017 Jul 27.

26.

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.

Mukherjee S, Seshadri R, Varghese NJ, Eloe-Fadrosh EA, Meier-Kolthoff JP, Göker M, Coates RC, Hadjithomas M, Pavlopoulos GA, Paez-Espino D, Yoshikuni Y, Visel A, Whitman WB, Garrity GM, Eisen JA, Hugenholtz P, Pati A, Ivanova NN, Woyke T, Klenk HP, Kyrpides NC.

Nat Biotechnol. 2017 Jul;35(7):676-683. doi: 10.1038/nbt.3886. Epub 2017 Jun 12.

27.

RNA-Dependent Cysteine Biosynthesis in Bacteria and Archaea.

Mukai T, Crnković A, Umehara T, Ivanova NN, Kyrpides NC, Söll D.

mBio. 2017 May 9;8(3). pii: e00561-17. doi: 10.1128/mBio.00561-17.

28.

Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533T, a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia.

Susanti D, Johnson EF, Lapidus A, Han J, Reddy TB, Mukherjee S, Pillay M, Perevalova AA, Ivanova NN, Woyke T, Kyrpides NC, Mukhopadhyay B.

Genome Announc. 2017 Apr 13;5(15). pii: e00078-17. doi: 10.1128/genomeA.00078-17.

29.

Giant viruses with an expanded complement of translation system components.

Schulz F, Yutin N, Ivanova NN, Ortega DR, Lee TK, Vierheilig J, Daims H, Horn M, Wagner M, Jensen GJ, Kyrpides NC, Koonin EV, Woyke T.

Science. 2017 Apr 7;356(6333):82-85. doi: 10.1126/science.aal4657.

PMID:
28386012
30.

Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds.

Jiao JY, Carro L, Liu L, Gao XY, Zhang XT, Hozzein WN, Lapidus A, Huntemann M, Reddy TBK, Varghese N, Hadjithomas M, Ivanova NN, Göker M, Pillay M, Eisen JA, Woyke T, Klenk HP, Kyrpides NC, Li WJ.

Stand Genomic Sci. 2017 Feb 3;12:21. doi: 10.1186/s40793-017-0226-6. eCollection 2017.

31.

Transfer RNAs with novel cloverleaf structures.

Mukai T, Vargas-Rodriguez O, Englert M, Tripp HJ, Ivanova NN, Rubin EM, Kyrpides NC, Söll D.

Nucleic Acids Res. 2017 Mar 17;45(5):2776-2785. doi: 10.1093/nar/gkw898.

32.

Genome-Based Taxonomic Classification of Bacteroidetes.

Hahnke RL, Meier-Kolthoff JP, García-López M, Mukherjee S, Huntemann M, Ivanova NN, Woyke T, Kyrpides NC, Klenk HP, Göker M.

Front Microbiol. 2016 Dec 20;7:2003. doi: 10.3389/fmicb.2016.02003. eCollection 2016. Erratum in: Front Microbiol. 2018 Feb 21;9:304.

33.

[Apple juice nutritional profile].

Ivanova NN, Khomich LM, Perova IB.

Vopr Pitan. 2017;86(4):125-136. doi: 10.24411/0042-8833-2017-00068. Epub 2017 Jun 30. Russian.

PMID:
30695620
34.

[Orange juice nutritional profile].

Ivanova NN, Khomich LM, Perova IB.

Vopr Pitan. 2017;86(6):103-113. doi: 10.24411/0042-8833-2017-00012. Epub 2017 Nov 7. Russian.

PMID:
30592860
35.

IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes.

Hadjithomas M, Chen IA, Chu K, Huang J, Ratner A, Palaniappan K, Andersen E, Markowitz V, Kyrpides NC, Ivanova NN.

Nucleic Acids Res. 2017 Jan 4;45(D1):D560-D565. doi: 10.1093/nar/gkw1103. Epub 2016 Nov 29.

36.

IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses.

Paez-Espino D, Chen IA, Palaniappan K, Ratner A, Chu K, Szeto E, Pillay M, Huang J, Markowitz VM, Nielsen T, Huntemann M, K Reddy TB, Pavlopoulos GA, Sullivan MB, Campbell BJ, Chen F, McMahon K, Hallam SJ, Denef V, Cavicchioli R, Caffrey SM, Streit WR, Webster J, Handley KM, Salekdeh GH, Tsesmetzis N, Setubal JC, Pope PB, Liu WT, Rivers AR, Ivanova NN, Kyrpides NC.

Nucleic Acids Res. 2017 Jan 4;45(D1):D457-D465. doi: 10.1093/nar/gkw1030. Epub 2016 Oct 30.

37.

IMG/M: integrated genome and metagenome comparative data analysis system.

Chen IA, Markowitz VM, Chu K, Palaniappan K, Szeto E, Pillay M, Ratner A, Huang J, Andersen E, Huntemann M, Varghese N, Hadjithomas M, Tennessen K, Nielsen T, Ivanova NN, Kyrpides NC.

Nucleic Acids Res. 2017 Jan 4;45(D1):D507-D516. doi: 10.1093/nar/gkw929. Epub 2016 Oct 13.

38.

Metagenomics uncovers gaps in amplicon-based detection of microbial diversity.

Eloe-Fadrosh EA, Ivanova NN, Woyke T, Kyrpides NC.

Nat Microbiol. 2016 Feb 1;1:15032. doi: 10.1038/nmicrobiol.2015.32.

PMID:
27572438
39.

Uncovering Earth's virome.

Paez-Espino D, Eloe-Fadrosh EA, Pavlopoulos GA, Thomas AD, Huntemann M, Mikhailova N, Rubin E, Ivanova NN, Kyrpides NC.

Nature. 2016 Aug 25;536(7617):425-30. Epub 2016 Aug 17.

40.

[Facile Recoding of Selenocysteine in Nature].

Mukai T, Englert M, Tripp HJ, Miller C, Ivanova NN, Rubin EM, Kyrpides NC, Söll D.

Angew Chem Weinheim Bergstr Ger. 2016 Apr 18;128(17):5423-5427. Epub 2016 Mar 15. German. No abstract available.

41.

Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050(T) (DSM 19838(T)) and Gramella portivictoriae UST040801-001(T) (DSM 23547(T)), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005.

Panschin I, Huang S, Meier-Kolthoff JP, Tindall BJ, Rohde M, Verbarg S, Lapidus A, Han J, Trong S, Haynes M, Reddy TB, Huntemann M, Pati A, Ivanova NN, Mavromatis K, Markowitz V, Woyke T, Göker M, Klenk HP, Kyrpides NC, Hahnke RL.

Stand Genomic Sci. 2016 Jun 3;11:37. doi: 10.1186/s40793-016-0163-9. eCollection 2016.

42.

Microbiome Data Science: Understanding Our Microbial Planet.

Kyrpides NC, Eloe-Fadrosh EA, Ivanova NN.

Trends Microbiol. 2016 Jun;24(6):425-427. doi: 10.1016/j.tim.2016.02.011.

43.

Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system.

Chen IM, Markowitz VM, Palaniappan K, Szeto E, Chu K, Huang J, Ratner A, Pillay M, Hadjithomas M, Huntemann M, Mikhailova N, Ovchinnikova G, Ivanova NN, Kyrpides NC.

BMC Genomics. 2016 Apr 26;17:307. doi: 10.1186/s12864-016-2629-y.

44.

Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).

Huntemann M, Ivanova NN, Mavromatis K, Tripp HJ, Paez-Espino D, Palaniappan K, Szeto E, Pillay M, Chen IM, Pati A, Nielsen T, Markowitz VM, Kyrpides NC.

Stand Genomic Sci. 2016 Mar 21;11:27. doi: 10.1186/s40793-016-0148-8. eCollection 2016.

45.

Facile Recoding of Selenocysteine in Nature.

Mukai T, Englert M, Tripp HJ, Miller C, Ivanova NN, Rubin EM, Kyrpides NC, Söll D.

Angew Chem Int Ed Engl. 2016 Apr 18;55(17):5337-41. doi: 10.1002/anie.201511657. Epub 2016 Mar 16.

46.

The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4).

Huntemann M, Ivanova NN, Mavromatis K, Tripp HJ, Paez-Espino D, Tennessen K, Palaniappan K, Szeto E, Pillay M, Chen IM, Pati A, Nielsen T, Markowitz VM, Kyrpides NC.

Stand Genomic Sci. 2016 Feb 24;11:17. doi: 10.1186/s40793-016-0138-x. eCollection 2016.

47.

Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs.

Eloe-Fadrosh EA, Paez-Espino D, Jarett J, Dunfield PF, Hedlund BP, Dekas AE, Grasby SE, Brady AL, Dong H, Briggs BR, Li WJ, Goudeau D, Malmstrom R, Pati A, Pett-Ridge J, Rubin EM, Woyke T, Kyrpides NC, Ivanova NN.

Nat Commun. 2016 Jan 27;7:10476. doi: 10.1038/ncomms10476.

48.

Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland.

Susanti D, Johnson EF, Lapidus A, Han J, Reddy TB, Pilay M, Ivanova NN, Markowitz VM, Woyke T, Kyrpides NC, Mukhopadhyay B.

Stand Genomic Sci. 2016 Jan 13;11:3. doi: 10.1186/s40793-015-0128-4. eCollection 2016.

49.

Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria.

Seshadri R, Reeve WG, Ardley JK, Tennessen K, Woyke T, Kyrpides NC, Ivanova NN.

Sci Rep. 2015 Nov 20;5:16825. doi: 10.1038/srep16825.

50.

The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).

Huntemann M, Ivanova NN, Mavromatis K, Tripp HJ, Paez-Espino D, Palaniappan K, Szeto E, Pillay M, Chen IM, Pati A, Nielsen T, Markowitz VM, Kyrpides NC.

Stand Genomic Sci. 2015 Oct 26;10:86. doi: 10.1186/s40793-015-0077-y. eCollection 2015. Erratum in: Stand Genomic Sci. 2016;11:27.

Supplemental Content

Loading ...
Support Center