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Items: 19


NanoCAGE-XL: An Approach to High-Confidence Transcription Start Site Sequencing.

Ivanchenko MG, Megraw M.

Methods Mol Biol. 2018;1830:225-237. doi: 10.1007/978-1-4939-8657-6_13.


Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants.

Megraw M, Cumbie JS, Ivanchenko MG, Filichkin SA.

Plant Cell. 2016 Feb;28(2):286-303. doi: 10.1105/tpc.15.00852. Epub 2016 Feb 11. Review.


NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites.

Cumbie JS, Ivanchenko MG, Megraw M.

BMC Genomics. 2015 Aug 13;16:597. doi: 10.1186/s12864-015-1670-6.


The cyclophilin A DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation.

Ivanchenko MG, Zhu J, Wang B, Medvecká E, Du Y, Azzarello E, Mancuso S, Megraw M, Filichkin S, Dubrovsky JG, Friml J, Geisler M.

Development. 2015 Feb 15;142(4):712-21. doi: 10.1242/dev.113225. Epub 2015 Jan 23.


Auxin increases the hydrogen peroxide (H2O2) concentration in tomato (Solanum lycopersicum) root tips while inhibiting root growth.

Ivanchenko MG, den Os D, Monshausen GB, Dubrovsky JG, Bednárová A, Krishnan N.

Ann Bot. 2013 Oct;112(6):1107-16. doi: 10.1093/aob/mct181. Epub 2013 Aug 21.


Tomato root penetration in soil requires a coaction between ethylene and auxin signaling.

Santisree P, Nongmaithem S, Vasuki H, Sreelakshmi Y, Ivanchenko MG, Sharma R.

Plant Physiol. 2011 Jul;156(3):1424-38. doi: 10.1104/pp.111.177014. Epub 2011 May 12.


Auxin minimum defines a developmental window for lateral root initiation.

Dubrovsky JG, Napsucialy-Mendivil S, Duclercq J, Cheng Y, Shishkova S, Ivanchenko MG, Friml J, Murphy AS, Benková E.

New Phytol. 2011 Sep;191(4):970-83. doi: 10.1111/j.1469-8137.2011.03757.x. Epub 2011 May 13.


Auxin-induced inhibition of lateral root initiation contributes to root system shaping in Arabidopsis thaliana.

Ivanchenko MG, Napsucialy-Mendivil S, Dubrovsky JG.

Plant J. 2010 Dec;64(5):740-52. doi: 10.1111/j.1365-313X.2010.04365.x. Epub 2010 Oct 15.


A morphogenetic trigger: is there an emerging concept in plant developmental biology?

Benková E, Ivanchenko MG, Friml J, Shishkova S, Dubrovsky JG.

Trends Plant Sci. 2009 Apr;14(4):189-93. doi: 10.1016/j.tplants.2009.01.006. Epub 2009 Mar 13.


The lateral root initiation index: an integrative measure of primordium formation.

Dubrovsky JG, Soukup A, Napsucialy-Mendivil S, Jeknic Z, Ivanchenko MG.

Ann Bot. 2009 Mar;103(5):807-17. doi: 10.1093/aob/mcn267. Epub 2009 Jan 16.


Auxin acts as a local morphogenetic trigger to specify lateral root founder cells.

Dubrovsky JG, Sauer M, Napsucialy-Mendivil S, Ivanchenko MG, Friml J, Shishkova S, Celenza J, Benková E.

Proc Natl Acad Sci U S A. 2008 Jun 24;105(25):8790-4. doi: 10.1073/pnas.0712307105. Epub 2008 Jun 16.


Ethylene-auxin interactions regulate lateral root initiation and emergence in Arabidopsis thaliana.

Ivanchenko MG, Muday GK, Dubrovsky JG.

Plant J. 2008 Jul;55(2):335-47. doi: 10.1111/j.1365-313X.2008.03528.x. Epub 2008 Apr 24.


Ethylene regulates lateral root formation and auxin transport in Arabidopsis thaliana.

Negi S, Ivanchenko MG, Muday GK.

Plant J. 2008 Jul;55(2):175-87. doi: 10.1111/j.1365-313X.2008.03495.x. Epub 2008 Mar 19.


The diageotropica gene of tomato encodes a cyclophilin: a novel player in auxin signaling.

Oh K, Ivanchenko MG, White TJ, Lomax TL.

Planta. 2006 Jun;224(1):133-44. Epub 2006 Jan 4.


Fine mapping in tomato using microsynteny with the Arabidopsis genome: the Diageotropica (Dgt) locus.

Oh K, Hardeman K, Ivanchenko MG, Ellard-Ivey M, Nebenführ A, White TJ, Lomax TL.

Genome Biol. 2002 Aug 28;3(9):research0049. Epub 2002 Aug 28.


Continuous in vitro propagation and differentiation of cultures of the intramolluscan stages of the human parasite Schistosoma mansoni.

Ivanchenko MG, Lerner JP, McCormick RS, Toumadje A, Allen B, Fischer K, Hedstrom O, Helmrich A, Barnes DW, Bayne CJ.

Proc Natl Acad Sci U S A. 1999 Apr 27;96(9):4965-70.


Electrophoretic heterogeneity of maize histones.

Ivanchenko MG, Georgieva EI.

Electrophoresis. 1988 Dec;9(12):812-5.


Supercoils in plant DNA: nucleoid sedimentation studies.

Stoilov LM, Zlatanova JS, Vassileva AP, Ivanchenko MG, Krachmarov CP, Genchev DD.

J Cell Sci. 1988 Feb;89 ( Pt 2):243-52.

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