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Items: 1 to 50 of 72

1.

Viral antigens elicit augmented immune responses in primary Sjögren's syndrome.

Björk A, Thorlacius GE, Mofors J, Richardsdotter Andersson E, Ivanchenko M, Tingström J, James T, Brokstad KA, Cox RJ, Jonsson R, Kvarnström M, Wahren-Herlenius M.

Rheumatology (Oxford). 2019 Oct 30. pii: kez509. doi: 10.1093/rheumatology/kez509. [Epub ahead of print]

PMID:
31665501
2.

PKHD1L1 is a coat protein of hair-cell stereocilia and is required for normal hearing.

Wu X, Ivanchenko MV, Al Jandal H, Cicconet M, Indzhykulian AA, Corey DP.

Nat Commun. 2019 Aug 23;10(1):3801. doi: 10.1038/s41467-019-11712-w.

3.

Quantum Lyapunov exponents beyond continuous measurements.

Yusipov II, Vershinina OS, Denisov S, Kuznetsov SP, Ivanchenko MV.

Chaos. 2019 Jun;29(6):063130. doi: 10.1063/1.5094324.

PMID:
31266336
4.

FoxP3+ CXCR5+ CD4+ T cell frequencies are increased in peripheral blood of patients with primary Sjögren's syndrome.

Ivanchenko M, Aqrawi LA, Björk A, Wahren-Herlenius M, Chemin K.

Clin Exp Immunol. 2019 Mar;195(3):305-309. doi: 10.1111/cei.13244. Epub 2019 Jan 10.

PMID:
30632148
5.

Gene Transfer with AAV9-PHP.B Rescues Hearing in a Mouse Model of Usher Syndrome 3A and Transduces Hair Cells in a Non-human Primate.

György B, Meijer EJ, Ivanchenko MV, Tenneson K, Emond F, Hanlon KS, Indzhykulian AA, Volak A, Karavitaki KD, Tamvakologos PI, Vezina M, Berezovskii VK, Born RT, O'Brien M, Lafond JF, Arsenijevic Y, Kenna MA, Maguire CA, Corey DP.

Mol Ther Methods Clin Dev. 2018 Nov 20;13:1-13. doi: 10.1016/j.omtm.2018.11.003. eCollection 2019 Jun 14.

6.

Inflammaging 2018: An update and a model.

Franceschi C, Zaikin A, Gordleeva S, Ivanchenko M, Bonifazi F, Storci G, Bonafè M.

Semin Immunol. 2018 Dec;40:1-5. doi: 10.1016/j.smim.2018.10.008. Epub 2018 Nov 2. No abstract available.

PMID:
30392751
7.

The Sjögren's syndrome-associated autoantigen Ro52/TRIM21 modulates follicular B cell homeostasis and immunoglobulin production.

Brauner S, Ivanchenko M, Thorlacius GE, Ambrosi A, Wahren-Herlenius M.

Clin Exp Immunol. 2018 Dec;194(3):315-326. doi: 10.1111/cei.13211. Epub 2018 Oct 16.

PMID:
30178506
8.

NanoCAGE-XL: An Approach to High-Confidence Transcription Start Site Sequencing.

Ivanchenko MG, Megraw M.

Methods Mol Biol. 2018;1830:225-237. doi: 10.1007/978-1-4939-8657-6_13.

PMID:
30043373
9.

Clinical associations and expression pattern of the autoimmunity susceptibility factor DIORA-1 in patients with primary Sjögren's syndrome.

Aqrawi LA, Mentlein L, Meneghel L, Björk A, Thorlacius GE, Ivanchenko M, Ramírez Sepúlveda JI, Skarstein K, Kvarnström M, Brauner S, Espinosa A, Wahren-Herlenius M.

Ann Rheum Dis. 2018 Dec;77(12):1840-1842. doi: 10.1136/annrheumdis-2018-213634. Epub 2018 Jul 17. No abstract available.

PMID:
30018071
10.

Diminished CXCR5 expression in peripheral blood of patients with Sjögren's syndrome may relate to both genotype and salivary gland homing.

Aqrawi LA, Ivanchenko M, Björk A, Ramírez Sepúlveda JI, Imgenberg-Kreuz J, Kvarnström M, Haselmayer P, Jensen JL, Nordmark G, Chemin K, Skarstein K, Wahren-Herlenius M.

Clin Exp Immunol. 2018 Jun;192(3):259-270. doi: 10.1111/cei.13118. Epub 2018 Mar 24.

11.

Multiplexing topologies and time scales: The gains and losses of synchrony.

Makovkin S, Kumar A, Zaikin A, Jalan S, Ivanchenko M.

Phys Rev E. 2017 Nov;96(5-1):052214. doi: 10.1103/PhysRevE.96.052214. Epub 2017 Nov 20.

PMID:
29347745
12.

Computation of the asymptotic states of modulated open quantum systems with a numerically exact realization of the quantum trajectory method.

Volokitin V, Liniov A, Meyerov I, Hartmann M, Ivanchenko M, Hänggi P, Denisov S.

Phys Rev E. 2017 Nov;96(5-1):053313. doi: 10.1103/PhysRevE.96.053313. Epub 2017 Nov 29.

PMID:
29347681
13.

Localization in Open Quantum Systems.

Yusipov I, Laptyeva T, Denisov S, Ivanchenko M.

Phys Rev Lett. 2017 Feb 17;118(7):070402. doi: 10.1103/PhysRevLett.118.070402. Epub 2017 Feb 16.

PMID:
28256848
14.

Parenclitic Network Analysis of Methylation Data for Cancer Identification.

Karsakov A, Bartlett T, Ryblov A, Meyerov I, Ivanchenko M, Zaikin A.

PLoS One. 2017 Jan 20;12(1):e0169661. doi: 10.1371/journal.pone.0169661. eCollection 2017.

15.

Spatiotemporal dynamics of distributed synthetic genetic circuits.

Kanakov O, Laptyeva T, Tsimring L, Ivanchenko M.

Physica D. 2016 Apr 1;318-319:116-123.

16.

Master and servant: Regulation of auxin transporters by FKBPs and cyclophilins.

Geisler M, Bailly A, Ivanchenko M.

Plant Sci. 2016 Apr;245:1-10. doi: 10.1016/j.plantsci.2015.12.004. Epub 2016 Jan 16. Review.

PMID:
26940487
17.

Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants.

Megraw M, Cumbie JS, Ivanchenko MG, Filichkin SA.

Plant Cell. 2016 Feb;28(2):286-303. doi: 10.1105/tpc.15.00852. Epub 2016 Feb 11. Review.

18.

Variations in the Intragene Methylation Profiles Hallmark Induced Pluripotency.

Druzhkov P, Zolotykh N, Meyerov I, Alsaedi A, Shutova M, Ivanchenko M, Zaikin A.

Biomed Res Int. 2015;2015:976362. doi: 10.1155/2015/976362. Epub 2015 Nov 5.

19.

Anderson attractors in active arrays.

Laptyeva TV, Tikhomirov AA, Kanakov OI, Ivanchenko MV.

Sci Rep. 2015 Aug 25;5:13263. doi: 10.1038/srep13263.

20.

NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites.

Cumbie JS, Ivanchenko MG, Megraw M.

BMC Genomics. 2015 Aug 13;16:597. doi: 10.1186/s12864-015-1670-6.

21.

Multi-input distributed classifiers for synthetic genetic circuits.

Kanakov O, Kotelnikov R, Alsaedi A, Tsimring L, Huerta R, Zaikin A, Ivanchenko M.

PLoS One. 2015 May 6;10(5):e0125144. doi: 10.1371/journal.pone.0125144. eCollection 2015.

22.

Reduced expression of TRIM21/Ro52 predicts poor prognosis in diffuse large B-cell lymphoma patients with and without rheumatic disease.

Brauner S, Zhou W, Backlin C, Green TM, Folkersen L, Ivanchenko M, Löfström B, Xu-Monette ZY, Young KH, Møller Pedersen L, Boe Møller M, Sundström C, Enblad G, Baecklund E, Wahren-Herlenius M.

J Intern Med. 2015 Sep;278(3):323-32. doi: 10.1111/joim.12375. Epub 2015 May 29.

23.

The cyclophilin A DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation.

Ivanchenko MG, Zhu J, Wang B, Medvecká E, Du Y, Azzarello E, Mancuso S, Megraw M, Filichkin S, Dubrovsky JG, Friml J, Geisler M.

Development. 2015 Feb 15;142(4):712-21. doi: 10.1242/dev.113225. Epub 2015 Jan 23.

24.

Distributed classifier based on genetically engineered bacterial cell cultures.

Didovyk A, Kanakov OI, Ivanchenko MV, Hasty J, Huerta R, Tsimring L.

ACS Synth Biol. 2015 Jan 16;4(1):72-82. doi: 10.1021/sb500235p. Epub 2014 Nov 11.

25.

Assessing T cell clonal size distribution: a non-parametric approach.

Bolkhovskaya OV, Zorin DY, Ivanchenko MV.

PLoS One. 2014 Oct 2;9(9):e108658. doi: 10.1371/journal.pone.0108658. eCollection 2014.

26.

Auxin increases the hydrogen peroxide (H2O2) concentration in tomato (Solanum lycopersicum) root tips while inhibiting root growth.

Ivanchenko MG, den Os D, Monshausen GB, Dubrovsky JG, Bednárová A, Krishnan N.

Ann Bot. 2013 Oct;112(6):1107-16. doi: 10.1093/aob/mct181. Epub 2013 Aug 21.

27.

The root as a drill: an ethylene-auxin interaction facilitates root penetration in soil.

Santisree P, Nongmaithem S, Sreelakshmi Y, Ivanchenko M, Sharma R.

Plant Signal Behav. 2012 Feb;7(2):151-6. doi: 10.4161/psb.18936. Epub 2012 Feb 1. Review.

28.

Anderson localization or nonlinear waves: a matter of probability.

Ivanchenko MV, Laptyeva TV, Flach S.

Phys Rev Lett. 2011 Dec 9;107(24):240602. Epub 2011 Dec 9.

PMID:
22242983
29.

Tomato root penetration in soil requires a coaction between ethylene and auxin signaling.

Santisree P, Nongmaithem S, Vasuki H, Sreelakshmi Y, Ivanchenko MG, Sharma R.

Plant Physiol. 2011 Jul;156(3):1424-38. doi: 10.1104/pp.111.177014. Epub 2011 May 12.

30.

Auxin minimum defines a developmental window for lateral root initiation.

Dubrovsky JG, Napsucialy-Mendivil S, Duclercq J, Cheng Y, Shishkova S, Ivanchenko MG, Friml J, Murphy AS, Benková E.

New Phytol. 2011 Sep;191(4):970-83. doi: 10.1111/j.1469-8137.2011.03757.x. Epub 2011 May 13.

31.

Auxin-induced inhibition of lateral root initiation contributes to root system shaping in Arabidopsis thaliana.

Ivanchenko MG, Napsucialy-Mendivil S, Dubrovsky JG.

Plant J. 2010 Dec;64(5):740-52. doi: 10.1111/j.1365-313X.2010.04365.x. Epub 2010 Oct 15.

32.

[Influence of climatic and geographic factors on the environmental distribution of heavy metals and children's health].

Lutsevich IN, Ivanchenko MN, Zhukov VV.

Gig Sanit. 2010 May-Jun;(3):63-6. Russian.

PMID:
20734744
33.

q Breathers in finite lattices: nonlinearity and weak disorder.

Ivanchenko MV.

Phys Rev Lett. 2009 May 1;102(17):175507. Epub 2009 Apr 30.

PMID:
19518797
34.

A morphogenetic trigger: is there an emerging concept in plant developmental biology?

Benková E, Ivanchenko MG, Friml J, Shishkova S, Dubrovsky JG.

Trends Plant Sci. 2009 Apr;14(4):189-93. doi: 10.1016/j.tplants.2009.01.006. Epub 2009 Mar 13.

PMID:
19285906
35.

The lateral root initiation index: an integrative measure of primordium formation.

Dubrovsky JG, Soukup A, Napsucialy-Mendivil S, Jeknic Z, Ivanchenko MG.

Ann Bot. 2009 Mar;103(5):807-17. doi: 10.1093/aob/mcn267. Epub 2009 Jan 16.

36.

Auxin acts as a local morphogenetic trigger to specify lateral root founder cells.

Dubrovsky JG, Sauer M, Napsucialy-Mendivil S, Ivanchenko MG, Friml J, Shishkova S, Celenza J, Benková E.

Proc Natl Acad Sci U S A. 2008 Jun 24;105(25):8790-4. doi: 10.1073/pnas.0712307105. Epub 2008 Jun 16.

37.

Pacemaker and network mechanisms of rhythm generation: cooperation and competition.

Ivanchenko MV, Thomas Nowotny, Selverston AI, Rabinovich MI.

J Theor Biol. 2008 Aug 7;253(3):452-61. doi: 10.1016/j.jtbi.2008.04.016. Epub 2008 Apr 26.

PMID:
18514740
38.

Ethylene-auxin interactions regulate lateral root initiation and emergence in Arabidopsis thaliana.

Ivanchenko MG, Muday GK, Dubrovsky JG.

Plant J. 2008 Jul;55(2):335-47. doi: 10.1111/j.1365-313X.2008.03528.x. Epub 2008 Apr 24.

39.

Ethylene regulates lateral root formation and auxin transport in Arabidopsis thaliana.

Negi S, Ivanchenko MG, Muday GK.

Plant J. 2008 Jul;55(2):175-87. doi: 10.1111/j.1365-313X.2008.03495.x. Epub 2008 Mar 19.

40.

Chaotic spatial bifurcation by complex coupling.

Shalfeev VD, Ivanchenko MV, Forti GL.

Chaos. 2007 Jun;17(2):023103.

PMID:
17614657
41.
42.

Detecting complex network modularity by dynamical clustering.

Boccaletti S, Ivanchenko M, Latora V, Pluchino A, Rapisarda A.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Apr;75(4 Pt 2):045102. Epub 2007 Apr 12.

PMID:
17500946
43.

Network mechanism for burst generation.

Ivanchenko MV, Osipov GV, Shalfeev VD, Kurths J.

Phys Rev Lett. 2007 Mar 9;98(10):108101. Epub 2007 Mar 5.

PMID:
17358568
44.

Synchronization of spontaneous bursting in a CO2 laser.

Meucci R, Salvadori F, Ivanchenko MV, Al Naimee K, Zhou C, Arecchi FT, Boccaletti S, Kurths J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Dec;74(6 Pt 2):066207. Epub 2006 Dec 27.

PMID:
17280139
45.

q-Breathers in finite two- and three-dimensional nonlinear acoustic lattices.

Ivanchenko MV, Kanakov OI, Mishagin KG, Flach S.

Phys Rev Lett. 2006 Jul 14;97(2):025505. Epub 2006 Jul 14.

PMID:
16907458
47.

q-breathers in Fermi-Pasta-Ulam chains: existence, localization, and stability.

Flach S, Ivanchenko MV, Kanakov OI.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Mar;73(3 Pt 2):036618. Epub 2006 Mar 24.

PMID:
16605688
48.

TBP flanking sequences: asymmetry of binding, long-range effects and consensus sequences.

Faiger H, Ivanchenko M, Cohen I, Haran TE.

Nucleic Acids Res. 2006 Jan 10;34(1):104-19. Print 2006.

49.

The diageotropica gene of tomato encodes a cyclophilin: a novel player in auxin signaling.

Oh K, Ivanchenko MG, White TJ, Lomax TL.

Planta. 2006 Jun;224(1):133-44. Epub 2006 Jan 4.

PMID:
16395583
50.

q-Breathers and the Fermi-Pasta-Ulam problem.

Flach S, Ivanchenko MV, Kanakov OI.

Phys Rev Lett. 2005 Aug 5;95(6):064102. Epub 2005 Aug 2.

PMID:
16090957

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