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Items: 1 to 50 of 65

1.

PhyreRisk: A Dynamic Web Application to Bridge Genomics, Proteomics and 3D Structural Data to Guide Interpretation of Human Genetic Variants.

Ofoegbu TC, David A, Kelley LA, Mezulis S, Islam SA, Mersmann SF, Strömich L, Vakser IA, Houlston RS, Sternberg MJE.

J Mol Biol. 2019 Jun 14;431(13):2460-2466. doi: 10.1016/j.jmb.2019.04.043. Epub 2019 May 7.

2.

Can Predicted Protein 3D Structures Provide Reliable Insights into whether Missense Variants Are Disease Associated?

Ittisoponpisan S, Islam SA, Khanna T, Alhuzimi E, David A, Sternberg MJE.

J Mol Biol. 2019 May 17;431(11):2197-2212. doi: 10.1016/j.jmb.2019.04.009. Epub 2019 Apr 14.

3.

Integration of DNA methylation patterns and genetic variation in human pediatric tissues help inform EWAS design and interpretation.

Islam SA, Goodman SJ, MacIsaac JL, Obradović J, Barr RG, Boyce WT, Kobor MS.

Epigenetics Chromatin. 2019 Jan 2;12(1):1. doi: 10.1186/s13072-018-0245-6.

4.

Association of Low Level of High Density Lipoprotein cholesterol with Acute Coronary syndrome.

Islam MZ, Islam MN, Bhowmik TK, Roy AK, Saha B, Hossain MS, Paul PK, Ahmed H, Islam SA, Shakil SS.

Mymensingh Med J. 2018 Jul;27(3):508-512.

PMID:
30141439
5.

Epigenetic analysis of human postmortem brain tissue.

Islam SA, Lussier AA, Kobor MS.

Handb Clin Neurol. 2018;150:237-261. doi: 10.1016/B978-0-444-63639-3.00017-7. Review.

PMID:
29496144
6.
7.

Clinical profile, antibiotic susceptibility pattern of bacterial isolates and factors associated with complications in culture-proven typhoid patients admitted to an urban hospital in Bangladesh.

Khatun H, Islam SB, Naila NN, Islam SA, Nahar B, Alam NH, Ahmed T.

Trop Med Int Health. 2018 Apr;23(4):359-366. doi: 10.1111/tmi.13037. Epub 2018 Mar 8.

8.

Acute anti-obesity effects of intracerebroventricular 11β-HSD1 inhibitor administration in diet-induced obese mice.

Seo M, Islam SA, Moon SS.

J Neuroendocrinol. 2018 Mar;30(3):e12580. doi: 10.1111/jne.12580.

PMID:
29418022
9.

EzMol: A Web Server Wizard for the Rapid Visualization and Image Production of Protein and Nucleic Acid Structures.

Reynolds CR, Islam SA, Sternberg MJE.

J Mol Biol. 2018 Jul 20;430(15):2244-2248. doi: 10.1016/j.jmb.2018.01.013. Epub 2018 Jan 31.

10.

DNA methylation signatures of chronic alcohol dependence in purified CD3+ T-cells of patients undergoing alcohol treatment.

Brückmann C, Islam SA, MacIsaac JL, Morin AM, Karle KN, Di Santo A, Wüst R, Lang I, Batra A, Kobor MS, Nieratschker V.

Sci Rep. 2017 Jul 26;7(1):6605. doi: 10.1038/s41598-017-06847-z.

11.

Allergic asthma is distinguished by sensitivity of allergen-specific CD4+ T cells and airway structural cells to type 2 inflammation.

Cho JL, Ling MF, Adams DC, Faustino L, Islam SA, Afshar R, Griffith JW, Harris RS, Ng A, Radicioni G, Ford AA, Han AK, Xavier R, Kwok WW, Boucher R, Moon JJ, Hamilos DL, Kesimer M, Suter MJ, Medoff BD, Luster AD.

Sci Transl Med. 2016 Oct 5;8(359):359ra132.

12.

DNA methylation profiling in human Huntington's disease brain.

De Souza RA, Islam SA, McEwen LM, Mathelier A, Hill A, Mah SM, Wasserman WW, Kobor MS, Leavitt BR.

Hum Mol Genet. 2016 May 15;25(10):2013-2030. Epub 2016 Mar 6.

PMID:
26953320
13.

Mesoblastic Nephroma in a 22 Years Old Woman.

Islam SA, Rahman MS, Habib S, Salam MA.

Mymensingh Med J. 2015 Oct;24(4):856-8.

PMID:
26620031
14.

Adjusting for Cell Type Composition in DNA Methylation Data Using a Regression-Based Approach.

Jones MJ, Islam SA, Edgar RD, Kobor MS.

Methods Mol Biol. 2017;1589:99-106. doi: 10.1007/7651_2015_262.

PMID:
26126446
15.

The transcriptional repressor BLIMP1 curbs host defenses by suppressing expression of the chemokine CCL8.

Severa M, Islam SA, Waggoner SN, Jiang Z, Kim ND, Ryan G, Kurt-Jones E, Charo I, Caffrey DR, Boyartchuk VL, Luster AD, Fitzgerald KA.

J Immunol. 2014 Mar 1;192(5):2291-304. doi: 10.4049/jimmunol.1301799. Epub 2014 Jan 29.

16.

Identification of human CCR8 as a CCL18 receptor.

Islam SA, Ling MF, Leung J, Shreffler WG, Luster AD.

J Exp Med. 2013 Sep 23;210(10):1889-98. doi: 10.1084/jem.20130240. Epub 2013 Sep 2.

17.

Molecular epidemiology of influenza A (H5N1) viruses, Bangladesh, 2007-2011.

Hoque MA, Tun HM, Hassan MM, Khan SA, Islam SA, Islam MN, Giasuddin M, Osmani TM, Islam A, Thornton RN, Burgess GW, Skerratt LF, Selleck P, Brun E, Debnath NC, Leung FC.

Prev Vet Med. 2013 Sep 1;111(3-4):314-8. doi: 10.1016/j.prevetmed.2013.06.003. Epub 2013 Jun 29.

PMID:
23820377
18.

Antibacterial, antidiarrhoeal, and cytotoxic activities of methanol extract and its fractions of Caesalpinia bonducella (L.) Roxb leaves.

Billah MM, Islam R, Khatun H, Parvin S, Islam E, Islam SA, Mia AA.

BMC Complement Altern Med. 2013 May 12;13:101. doi: 10.1186/1472-6882-13-101.

19.

T cell homing to epithelial barriers in allergic disease.

Islam SA, Luster AD.

Nat Med. 2012 May 4;18(5):705-15. doi: 10.1038/nm.2760. Review.

20.

The Discovery of Novel 10,11-Dihydro-5H-dibenz[b,f]azepine SIRT2 Inhibitors.

Di Fruscia P, Ho KK, Laohasinnarong S, Khongkow M, Kroll SH, Islam SA, Sternberg MJ, Schmidtkunz K, Jung M, Lam EW, Fuchter MJ.

Medchemcomm. 2012 Mar 1;(3). doi: 10.1039/C2MD00290F.

21.

Mouse CCL8, a CCR8 agonist, promotes atopic dermatitis by recruiting IL-5+ T(H)2 cells.

Islam SA, Chang DS, Colvin RA, Byrne MH, McCully ML, Moser B, Lira SA, Charo IF, Luster AD.

Nat Immunol. 2011 Feb;12(2):167-77. doi: 10.1038/ni.1984. Epub 2011 Jan 9.

22.

Chitinase of Bacillus licheniformis from oyster shell as a probe to detect chitin in marine shells.

Islam SA, Cho KM, Hong SJ, Math RK, Kim JM, Yun MG, Cho JJ, Heo JY, Lee YH, Kim H, Yun HD.

Appl Microbiol Biotechnol. 2010 Mar;86(1):119-29. doi: 10.1007/s00253-009-2215-1. Epub 2009 Sep 16.

PMID:
19756579
23.

Variations in powder/liquid ratio of a restorative and luting glass ionomer cement in dental clinics.

Iqbal K, Islam SA, Ahmad I, Asmat M, Aminuddin M.

J Coll Physicians Surg Pak. 2009 Jul;19(7):464-5. doi: 07.2009/JCPSP.464465.

PMID:
19576161
24.

Quantitative analysis of cell nucleus organisation.

Shiels C, Adams NM, Islam SA, Stephens DA, Freemont PS.

PLoS Comput Biol. 2007 Jul;3(7):e138. Review.

25.

Detection of arsenic in water, herbal and soil samples by neutron activation analysis technique.

Islam MT, Islam SA, Latif SA.

Bull Environ Contam Toxicol. 2007 Sep;79(3):327-30. Epub 2007 Jul 18.

PMID:
17639332
26.

The transcriptional regulator CBP has defined spatial associations within interphase nuclei.

McManus KJ, Stephens DA, Adams NM, Islam SA, Freemont PS, Hendzel MJ.

PLoS Comput Biol. 2006 Oct 20;2(10):e139. Epub 2006 Sep 8.

27.

CCR5 is essential for NK cell trafficking and host survival following Toxoplasma gondii infection.

Khan IA, Thomas SY, Moretto MM, Lee FS, Islam SA, Combe C, Schwartzman JD, Luster AD.

PLoS Pathog. 2006 Jun;2(6):e49. Epub 2006 Jun 9.

28.

The proteome: structure, function and evolution.

Fleming K, Kelley LA, Islam SA, MacCallum RM, Muller A, Pazos F, Sternberg MJ.

Philos Trans R Soc Lond B Biol Sci. 2006 Mar 29;361(1467):441-51. Review.

29.

The leukotriene B4 lipid chemoattractant receptor BLT1 defines antigen-primed T cells in humans.

Islam SA, Thomas SY, Hess C, Medoff BD, Means TK, Brander C, Lilly CM, Tager AM, Luster AD.

Blood. 2006 Jan 15;107(2):444-53. Epub 2005 Sep 22.

30.

BLT1-mediated T cell trafficking is critical for rejection and obliterative bronchiolitis after lung transplantation.

Medoff BD, Seung E, Wain JC, Means TK, Campanella GS, Islam SA, Thomas SY, Ginns LC, Grabie N, Lichtman AH, Tager AM, Luster AD.

J Exp Med. 2005 Jul 4;202(1):97-110.

31.

Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI.

Carter P, Lesk VI, Islam SA, Sternberg MJ.

Proteins. 2005 Aug 1;60(2):281-8.

PMID:
15981271
32.
33.

Promyelocytic leukemia nuclear bodies associate with transcriptionally active genomic regions.

Wang J, Shiels C, Sasieni P, Wu PJ, Islam SA, Freemont PS, Sheer D.

J Cell Biol. 2004 Feb 16;164(4):515-26.

34.

Redefinition of the cleavage sites of DNase I on the nucleosome core particle.

Cousins DJ, Islam SA, Sanderson MR, Proykova YG, Crane-Robinson C, Staynov DZ.

J Mol Biol. 2004 Jan 30;335(5):1199-211.

PMID:
14729337
35.

Leukotriene B4 receptor BLT1 mediates early effector T cell recruitment.

Tager AM, Bromley SK, Medoff BD, Islam SA, Bercury SD, Friedrich EB, Carafone AD, Gerszten RE, Luster AD.

Nat Immunol. 2003 Oct;4(10):982-90. Epub 2003 Aug 31.

PMID:
12949531
36.

Mutations in a Sar1 GTPase of COPII vesicles are associated with lipid absorption disorders.

Jones B, Jones EL, Bonney SA, Patel HN, Mensenkamp AR, Eichenbaum-Voline S, Rudling M, Myrdal U, Annesi G, Naik S, Meadows N, Quattrone A, Islam SA, Naoumova RP, Angelin B, Infante R, Levy E, Roy CC, Freemont PS, Scott J, Shoulders CC.

Nat Genet. 2003 May;34(1):29-31.

PMID:
12692552
37.

Clonotype tracking of TCR repertoires during chronic virus infections.

Cohen GB, Islam SA, Noble MS, Lau C, Brander C, Altfeld MA, Rosenberg ES, Schmitz JE, Cameron TO, Kalams SA.

Virology. 2002 Dec 20;304(2):474-84.

38.

Examination of the highly diverse CD4(+) T-cell repertoire directed against an influenza peptide: a step towards TCR proteomics.

Cameron TO, Cohen GB, Islam SA, Stern LJ.

Immunogenetics. 2002 Dec;54(9):611-20. Epub 2002 Nov 7.

PMID:
12466894
39.

Application of the diffusion-collision model to the folding of three-helix bundle proteins.

Islam SA, Karplus M, Weaver DL.

J Mol Biol. 2002 Apr 19;318(1):199-215.

PMID:
12054779
40.

PML bodies associate specifically with the MHC gene cluster in interphase nuclei.

Shiels C, Islam SA, Vatcheva R, Sasieni P, Sternberg MJ, Freemont PS, Sheer D.

J Cell Sci. 2001 Oct;114(Pt 20):3705-16.

41.

Vpr is preferentially targeted by CTL during HIV-1 infection.

Altfeld M, Addo MM, Eldridge RL, Yu XG, Thomas S, Khatri A, Strick D, Phillips MN, Cohen GB, Islam SA, Kalams SA, Brander C, Goulder PJ, Rosenberg ES, Walker BD; HIV Study Collaboration.

J Immunol. 2001 Sep 1;167(5):2743-52.

42.

Hemoglobin H disease in the eastern region of Saudi Arabia.

Qadri MI, Islam SA.

Saudi Med J. 2000 Jul;21(7):666-71.

PMID:
11500731
43.

Persistence of human immunodeficiency virus type 1-specific cytotoxic T-lymphocyte clones in a subject with rapid disease progression.

Islam SA, Hay CM, Hartman KE, He S, Shea AK, Trocha AK, Dynan MJ, Reshamwala N, Buchbinder SP, Basgoz NO, Kalams SA.

J Virol. 2001 May;75(10):4907-11.

44.

Evolution of anthropoid jaw loading and kinematic patterns.

Ravosa MJ, Vinyard CJ, Gagnon M, Islam SA.

Am J Phys Anthropol. 2000 Aug;112(4):493-516. Review.

PMID:
10918126
45.

HAD, a data bank of heavy-atom binding sites in protein crystals: a resource for use in multiple isomorphous replacement and anomalous scattering.

Islam SA, Carvin D, Sternberg MJ, Blundell TL.

Acta Crystallogr D Biol Crystallogr. 1998 Nov 1;54(Pt 6 Pt 1):1199-206.

PMID:
10089497
46.

Identification and analysis of domains in proteins.

Islam SA, Luo J, Sternberg MJ.

Protein Eng. 1995 Jun;8(6):513-25.

PMID:
8532675
47.

Towards an intelligent system for the automatic assignment of domains in globular proteins.

Sternberg MJ, Hegyi H, Islam SA, Luo J, Russell RB.

Proc Int Conf Intell Syst Mol Biol. 1995;3:376-83.

PMID:
7584461
48.

MacMolecular: a program for visualization of molecular structures on the Macintosh.

Weaver TD, Islam SA, Weaver DL.

J Mol Graph. 1994 Sep;12(3):231-4, 200.

PMID:
7819165
49.

A three-dimensional molecular template for substrates of human cytochrome P450 involved in debrisoquine 4-hydroxylation.

Islam SA, Wolf CR, Lennard MS, Sternberg MJ.

Carcinogenesis. 1991 Dec;12(12):2211-9.

PMID:
1747920
50.

Protein sequences--homologies and motifs.

Sternberg MJ, Islam SA.

Trends Biotechnol. 1991 Sep;9(9):300-2. No abstract available.

PMID:
1367615

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