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Items: 21

1.

Metastable asymmetrical structure of a shaftless V1 motor.

Maruyama S, Suzuki K, Imamura M, Sasaki H, Matsunami H, Mizutani K, Saito Y, Imai FL, Ishizuka-Katsura Y, Kimura-Someya T, Shirouzu M, Uchihashi T, Ando T, Yamato I, Murata T.

Sci Adv. 2019 Jan 30;5(1):eaau8149. doi: 10.1126/sciadv.aau8149. eCollection 2019 Jan.

2.

Parallel homodimer structures of the extracellular domains of the voltage-gated sodium channel β4 subunit explain its role in cell-cell adhesion.

Shimizu H, Tosaki A, Ohsawa N, Ishizuka-Katsura Y, Shoji S, Miyazaki H, Oyama F, Terada T, Shirouzu M, Sekine SI, Nukina N, Yokoyama S.

J Biol Chem. 2017 Aug 11;292(32):13428-13440. doi: 10.1074/jbc.M117.786509. Epub 2017 Jun 27.

3.

Crystal structural characterization reveals novel oligomeric interactions of human voltage-dependent anion channel 1.

Hosaka T, Okazaki M, Kimura-Someya T, Ishizuka-Katsura Y, Ito K, Yokoyama S, Dodo K, Sodeoka M, Shirouzu M.

Protein Sci. 2017 Sep;26(9):1749-1758. doi: 10.1002/pro.3211. Epub 2017 Jun 21.

4.

Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor.

Suzuki K, Mizutani K, Maruyama S, Shimono K, Imai FL, Muneyuki E, Kakinuma Y, Ishizuka-Katsura Y, Shirouzu M, Yokoyama S, Yamato I, Murata T.

Nat Commun. 2016 Oct 27;7:13235. doi: 10.1038/ncomms13235.

5.

Cell-free methods to produce structurally intact mammalian membrane proteins.

Shinoda T, Shinya N, Ito K, Ishizuka-Katsura Y, Ohsawa N, Terada T, Hirata K, Kawano Y, Yamamoto M, Tomita T, Ishibashi Y, Hirabayashi Y, Kimura-Someya T, Shirouzu M, Yokoyama S.

Sci Rep. 2016 Jul 28;6:30442. doi: 10.1038/srep30442.

6.

Structure-based site-directed photo-crosslinking analyses of multimeric cell-adhesive interactions of voltage-gated sodium channel β subunits.

Shimizu H, Miyazaki H, Ohsawa N, Shoji S, Ishizuka-Katsura Y, Tosaki A, Oyama F, Terada T, Sakamoto K, Shirouzu M, Sekine S, Nukina N, Yokoyama S.

Sci Rep. 2016 May 24;6:26618. doi: 10.1038/srep26618.

7.

Binding interactions of the peripheral stalk subunit isoforms from human V-ATPase.

Rahman S, Yamato I, Saijo S, Mizutani K, Takamuku Y, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Murata T.

Biosci Biotechnol Biochem. 2016 May;80(5):878-90. doi: 10.1080/09168451.2015.1135043. Epub 2016 Feb 10.

PMID:
26865189
8.

Allosteric regulation of γ-secretase activity by a phenylimidazole-type γ-secretase modulator.

Takeo K, Tanimura S, Shinoda T, Osawa S, Zahariev IK, Takegami N, Ishizuka-Katsura Y, Shinya N, Takagi-Niidome S, Tominaga A, Ohsawa N, Kimura-Someya T, Shirouzu M, Yokoshima S, Yokoyama S, Fukuyama T, Tomita T, Iwatsubo T.

Proc Natl Acad Sci U S A. 2014 Jul 22;111(29):10544-9. doi: 10.1073/pnas.1402171111. Epub 2014 Jul 9.

9.

Mutant LV(476-7)AA of A-subunit of Enterococcus hirae V1-ATPase: High affinity of A3B3 complex to DF axis and low ATPase activity.

Alam J, Yamato I, Arai S, Saijo S, Mizutani K, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Kakinuma Y, Murata T.

Springerplus. 2013 Dec 27;2:689. doi: 10.1186/2193-1801-2-689. eCollection 2013.

10.

Basic properties of rotary dynamics of the molecular motor Enterococcus hirae V1-ATPase.

Minagawa Y, Ueno H, Hara M, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Yamato I, Muneyuki E, Noji H, Murata T, Iino R.

J Biol Chem. 2013 Nov 8;288(45):32700-7. doi: 10.1074/jbc.M113.506329. Epub 2013 Oct 2.

11.

Loose binding of the DF axis with the A3B3 complex stimulates the initial activity of Enterococcus hirae V1-ATPase.

Alam MJ, Arai S, Saijo S, Suzuki K, Mizutani K, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Kakinuma Y, Yamato I, Murata T.

PLoS One. 2013 Sep 13;8(9):e74291. doi: 10.1371/journal.pone.0074291. eCollection 2013.

12.

Biochemical and biophysical properties of interactions between subunits of the peripheral stalk region of human V-ATPase.

Rahman S, Yamato I, Saijo S, Mizutani K, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T.

PLoS One. 2013;8(2):e55704. doi: 10.1371/journal.pone.0055704. Epub 2013 Feb 11.

13.

Rotation mechanism of Enterococcus hirae V1-ATPase based on asymmetric crystal structures.

Arai S, Saijo S, Suzuki K, Mizutani K, Kakinuma Y, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Yamato I, Murata T.

Nature. 2013 Jan 31;493(7434):703-7. doi: 10.1038/nature11778. Epub 2013 Jan 13.

PMID:
23334411
14.

Crystal structure of the central axis DF complex of the prokaryotic V-ATPase.

Saijo S, Arai S, Hossain KM, Yamato I, Suzuki K, Kakinuma Y, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T.

Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):19955-60. doi: 10.1073/pnas.1108810108. Epub 2011 Nov 23.

15.

Crystal structures of the armadillo repeat domain of adenomatous polyposis coli and its complex with the tyrosine-rich domain of Sam68.

Morishita EC, Murayama K, Kato-Murayama M, Ishizuka-Katsura Y, Tomabechi Y, Hayashi T, Terada T, Handa N, Shirouzu M, Akiyama T, Yokoyama S.

Structure. 2011 Oct 12;19(10):1496-508. doi: 10.1016/j.str.2011.07.013. Erratum in: Structure. 2011 Dec 7;19(12):1896.

16.

Expression, purification and characterization of isoforms of peripheral stalk subunits of human V-ATPase.

Rahman S, Ishizuka-Katsura Y, Arai S, Saijo S, Yamato I, Toyama M, Ohsawa N, Inoue M, Honda K, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T.

Protein Expr Purif. 2011 Aug;78(2):181-8. doi: 10.1016/j.pep.2011.02.012. Epub 2011 Feb 26.

PMID:
21356312
17.

Reconstitution in vitro of the catalytic portion (NtpA3-B3-D-G complex) of Enterococcus hirae V-type Na+-ATPase.

Arai S, Yamato I, Shiokawa A, Saijo S, Kakinuma Y, Ishizuka-Katsura Y, Toyama M, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T.

Biochem Biophys Res Commun. 2009 Dec 18;390(3):698-702. doi: 10.1016/j.bbrc.2009.10.032. Epub 2009 Oct 13.

PMID:
19833097
18.

Biotin-containing phospholipid vesicle layer formed on self-assembled monolayer of a saccharide-terminated alkyl disulfide for surface plasmon resonance biosensing.

Ishizuka-Katsura Y, Wazawa T, Ban T, Morigaki K, Aoyama S.

J Biosci Bioeng. 2008 May;105(5):527-35. doi: 10.1263/jbb.105.527.

PMID:
18558345
19.

Regulation of Notch signaling by dynamic changes in the precision of S3 cleavage of Notch-1.

Tagami S, Okochi M, Yanagida K, Ikuta A, Fukumori A, Matsumoto N, Ishizuka-Katsura Y, Nakayama T, Itoh N, Jiang J, Nishitomi K, Kamino K, Morihara T, Hashimoto R, Tanaka T, Kudo T, Chiba S, Takeda M.

Mol Cell Biol. 2008 Jan;28(1):165-76. Epub 2007 Oct 29.

20.

Grafting of poly(ethylene glycol) onto poly(acrylic acid)-coated glass for a protein-resistant surface.

Wazawa T, Ishizuka-Katsura Y, Nishikawa S, Iwane AH, Aoyama S.

Anal Chem. 2006 Apr 15;78(8):2549-56.

PMID:
16615763
21.

Presenilin-dependent gamma-secretase on plasma membrane and endosomes is functionally distinct.

Fukumori A, Okochi M, Tagami S, Jiang J, Itoh N, Nakayama T, Yanagida K, Ishizuka-Katsura Y, Morihara T, Kamino K, Tanaka T, Kudo T, Tanii H, Ikuta A, Haass C, Takeda M.

Biochemistry. 2006 Apr 18;45(15):4907-14.

PMID:
16605258

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