Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 198

1.

Deeply coloured and highly fluorescent dipolar merocyanines based on tricyanofuran.

Derevyanko NA, Ishchenko AA, Kulinich AV.

Phys Chem Chem Phys. 2020 Jan 17. doi: 10.1039/c9cp05827c. [Epub ahead of print]

PMID:
31950958
2.

Role of PARP-catalyzed ADP-ribosylation in the Crosstalk Between DNA Strand Breaks and Epigenetic Regulation.

Sutcu HH, Matta E, Ishchenko AA.

J Mol Biol. 2019 Dec 20. pii: S0022-2836(19)30719-3. doi: 10.1016/j.jmb.2019.12.019. [Epub ahead of print] Review.

PMID:
31866292
3.

Structural basis of ligand selectivity and disease mutations in cysteinyl leukotriene receptors.

Gusach A, Luginina A, Marin E, Brouillette RL, Besserer-Offroy É, Longpré JM, Ishchenko A, Popov P, Patel N, Fujimoto T, Maruyama T, Stauch B, Ergasheva M, Romanovskaia D, Stepko A, Kovalev K, Shevtsov M, Gordeliy V, Han GW, Katritch V, Borshchevskiy V, Sarret P, Mishin A, Cherezov V.

Nat Commun. 2019 Dec 6;10(1):5573. doi: 10.1038/s41467-019-13348-2.

4.

Toward G protein-coupled receptor structure-based drug design using X-ray lasers.

Ishchenko A, Stauch B, Han GW, Batyuk A, Shiriaeva A, Li C, Zatsepin N, Weierstall U, Liu W, Nango E, Nakane T, Tanaka R, Tono K, Joti Y, Iwata S, Moraes I, Gati C, Cherezov V.

IUCrJ. 2019 Oct 24;6(Pt 6):1106-1119. doi: 10.1107/S2052252519013137. eCollection 2019 Nov 1.

5.

Structure-based mechanism of cysteinyl leukotriene receptor inhibition by antiasthmatic drugs.

Luginina A, Gusach A, Marin E, Mishin A, Brouillette R, Popov P, Shiriaeva A, Besserer-Offroy É, Longpré JM, Lyapina E, Ishchenko A, Patel N, Polovinkin V, Safronova N, Bogorodskiy A, Edelweiss E, Hu H, Weierstall U, Liu W, Batyuk A, Gordeliy V, Han GW, Sarret P, Katritch V, Borshchevskiy V, Cherezov V.

Sci Adv. 2019 Oct 9;5(10):eaax2518. doi: 10.1126/sciadv.aax2518. eCollection 2019 Oct.

6.

Mechanism of stimulation of DNA binding of the transcription factors by human apurinic/apyrimidinic endonuclease 1, APE1.

Bazlekowa-Karaban M, Prorok P, Baconnais S, Taipakova S, Akishev Z, Zembrzuska D, Popov AV, Endutkin AV, Groisman R, Ishchenko AA, Matkarimov BT, Bissenbaev A, Le Cam E, Zharkov DO, Tudek B, Saparbaev M.

DNA Repair (Amst). 2019 Oct;82:102698. doi: 10.1016/j.dnarep.2019.102698. Epub 2019 Aug 31.

PMID:
31518879
7.

Study of Nanostructured TiO₂ Rutile with Hierarchical 3D-Architecture. Effect of the Synthesis and Calcinations Temperature.

Shikina NV, Bessudnova EV, Nikitin AP, Ishchenko AV, Rudina NA, Selishchev DS, Kozlov DV, Ismagilov ZR.

J Nanosci Nanotechnol. 2020 Feb 1;20(2):1303-1314. doi: 10.1166/jnn.2020.16977.

PMID:
31383132
8.

[Echinococcosis and pregnancy: approaches to the treatment].

Musaev GK, Sharipov RK, Fatyanova AS, Levkin VV, Ishchenko AI, Zuyev VM.

Khirurgiia (Mosk). 2019;(5):38-41. doi: 10.17116/hirurgia201905138. Russian.

PMID:
31169817
9.

High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source.

Martin-Garcia JM, Zhu L, Mendez D, Lee MY, Chun E, Li C, Hu H, Subramanian G, Kissick D, Ogata C, Henning R, Ishchenko A, Dobson Z, Zhang S, Weierstall U, Spence JCH, Fromme P, Zatsepin NA, Fischetti RF, Cherezov V, Liu W.

IUCrJ. 2019 Apr 5;6(Pt 3):412-425. doi: 10.1107/S205225251900263X. eCollection 2019 May 1.

10.

Publisher Correction: Structural basis of ligand recognition at the human MT1 melatonin receptor.

Stauch B, Johansson LC, McCorvy JD, Patel N, Han GW, Huang XP, Gati C, Batyuk A, Slocum ST, Ishchenko A, Brehm W, White TA, Michaelian N, Madsen C, Zhu L, Grant TD, Grandner JM, Shiriaeva A, Olsen RHJ, Tribo AR, Yous S, Stevens RC, Weierstall U, Katritch V, Roth BL, Liu W, Cherezov V.

Nature. 2019 May;569(7756):E6. doi: 10.1038/s41586-019-1209-0.

PMID:
31048811
11.

Structural basis of ligand recognition at the human MT1 melatonin receptor.

Stauch B, Johansson LC, McCorvy JD, Patel N, Han GW, Huang XP, Gati C, Batyuk A, Slocum ST, Ishchenko A, Brehm W, White TA, Michaelian N, Madsen C, Zhu L, Grant TD, Grandner JM, Shiriaeva A, Olsen RHJ, Tribo AR, Yous S, Stevens RC, Weierstall U, Katritch V, Roth BL, Liu W, Cherezov V.

Nature. 2019 May;569(7755):284-288. doi: 10.1038/s41586-019-1141-3. Epub 2019 Apr 24. Erratum in: Nature. 2019 May 3;:.

12.

Interaction of Polymethine Dyes with Detonation Nanodiamonds.

Ishchenko AA, Mchedlov-Petrossyan NO, Kriklya NN, Kryshtal AP, Ōsawa E, Kulinich AV.

Chemphyschem. 2019 Apr 16;20(8):1028-1035. doi: 10.1002/cphc.201900083. Epub 2019 Mar 28.

PMID:
30848540
13.

Data on PAGE analysis and MD simulation for the interaction of endonuclease Apn1 from Saccharomyces cerevisiae with DNA substrates containing 5,6-dihydrouracyl and 2-aminopurine.

Dyakonova ES, Koval VV, Lomzov AA, Ishchenko AA, Fedorova OS.

Data Brief. 2018 Sep 12;20:1515-1524. doi: 10.1016/j.dib.2018.09.007. eCollection 2018 Oct.

14.

Low-Temperature Effect on the Electronic Structure and Spectral-Fluorescent Properties of Highly Dipolar Merocyanines.

Kulinich AV, Ishchenko AA, Bondarev SL, Knyukshto VN.

J Phys Chem A. 2018 Dec 20;122(50):9645-9652. doi: 10.1021/acs.jpca.8b09522. Epub 2018 Dec 5.

PMID:
30452263
15.

Structure-Activity Relationships of Photoswitchable Diarylethene-Based β-Hairpin Peptides as Membranolytic Antimicrobial and Anticancer Agents.

Babii O, Afonin S, Ishchenko AY, Schober T, Negelia AO, Tolstanova GM, Garmanchuk LV, Ostapchenko LI, Komarov IV, Ulrich AS.

J Med Chem. 2018 Dec 13;61(23):10793-10813. doi: 10.1021/acs.jmedchem.8b01428. Epub 2018 Dec 4.

PMID:
30452249
16.

A New DNA Break Repair Pathway Involving PARP3 and Base Excision Repair Proteins.

Belousova EA, Kutuzov MM, Ivankina PA, Ishchenko AA, Lavrik OI.

Dokl Biochem Biophys. 2018 Sep;482(1):233-237. doi: 10.1134/S1607672918050010. Epub 2018 Nov 5.

PMID:
30397881
17.

Characterization of biochemical properties of an apurinic/apyrimidinic endonuclease from Helicobacter pylori.

Turgimbayeva A, Abeldenov S, Zharkov DO, Ishchenko AA, Ramankulov Y, Saparbaev M, Khassenov B.

PLoS One. 2018 Aug 15;13(8):e0202232. doi: 10.1371/journal.pone.0202232. eCollection 2018.

18.

Apurinic/apyrimidinic endonuclease Apn1 from Saccharomyces cerevisiae is recruited to the nucleotide incision repair pathway: Kinetic and structural features.

Dyakonova ES, Koval VV, Lomzov AA, Ishchenko AA, Fedorova OS.

Biochimie. 2018 Sep;152:53-62. doi: 10.1016/j.biochi.2018.06.012. Epub 2018 Jun 26.

PMID:
29959063
19.

Structural biology of G protein-coupled receptors: new opportunities from XFELs and cryoEM.

Ishchenko A, Gati C, Cherezov V.

Curr Opin Struct Biol. 2018 Aug;51:44-52. doi: 10.1016/j.sbi.2018.03.009. Epub 2018 Mar 16. Review.

20.

The role of the N-terminal domain of human apurinic/apyrimidinic endonuclease 1, APE1, in DNA glycosylase stimulation.

Kladova OA, Bazlekowa-Karaban M, Baconnais S, Piétrement O, Ishchenko AA, Matkarimov BT, Iakovlev DA, Vasenko A, Fedorova OS, Le Cam E, Tudek B, Kuznetsov NA, Saparbaev M.

DNA Repair (Amst). 2018 Apr;64:10-25. doi: 10.1016/j.dnarep.2018.02.001. Epub 2018 Feb 11.

PMID:
29475157
21.

Characterization of DNA ADP-ribosyltransferase activities of PARP2 and PARP3: new insights into DNA ADP-ribosylation.

Zarkovic G, Belousova EA, Talhaoui I, Saint-Pierre C, Kutuzov MM, Matkarimov BT, Biard D, Gasparutto D, Lavrik OI, Ishchenko AA.

Nucleic Acids Res. 2018 Mar 16;46(5):2417-2431. doi: 10.1093/nar/gkx1318.

22.

High-throughput in situ X-ray screening of and data collection from protein crystals at room temperature and under cryogenic conditions.

Broecker J, Morizumi T, Ou WL, Klingel V, Kuo A, Kissick DJ, Ishchenko A, Lee MY, Xu S, Makarov O, Cherezov V, Ogata CM, Ernst OP.

Nat Protoc. 2018 Feb;13(2):260-292. doi: 10.1038/nprot.2017.135. Epub 2018 Jan 4.

PMID:
29300389
23.

Chemically Stable Lipids for Membrane Protein Crystallization.

Ishchenko A, Peng L, Zinovev E, Vlasov A, Lee SC, Kuklin A, Mishin A, Borshchevskiy V, Zhang Q, Cherezov V.

Cryst Growth Des. 2017 Jun 7;17(6):3502-3511. doi: 10.1021/acs.cgd.7b00458. Epub 2017 May 12.

24.

Lessons in PROTAC Design from Selective Degradation with a Promiscuous Warhead.

Bondeson DP, Smith BE, Burslem GM, Buhimschi AD, Hines J, Jaime-Figueroa S, Wang J, Hamman BD, Ishchenko A, Crews CM.

Cell Chem Biol. 2018 Jan 18;25(1):78-87.e5. doi: 10.1016/j.chembiol.2017.09.010. Epub 2017 Nov 9.

25.

Pre-steady-state kinetic analysis of damage recognition by human single-strand selective monofunctional uracil-DNA glycosylase SMUG1.

Kuznetsova AA, Iakovlev DA, Misovets IV, Ishchenko AA, Saparbaev MK, Kuznetsov NA, Fedorova OS.

Mol Biosyst. 2017 Nov 21;13(12):2638-2649. doi: 10.1039/c7mb00457e.

PMID:
29051947
26.

UV-Vis absorption spectra and electronic structure of merocyanines in the gas phase.

Ishchenko AA, Kulinich AV, Bondarev SL, Raichenok TF.

Spectrochim Acta A Mol Biomol Spectrosc. 2018 Feb 5;190:332-335. doi: 10.1016/j.saa.2017.09.054. Epub 2017 Sep 21.

PMID:
28941887
27.

Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation.

Martin-Garcia JM, Conrad CE, Nelson G, Stander N, Zatsepin NA, Zook J, Zhu L, Geiger J, Chun E, Kissick D, Hilgart MC, Ogata C, Ishchenko A, Nagaratnam N, Roy-Chowdhury S, Coe J, Subramanian G, Schaffer A, James D, Ketwala G, Venugopalan N, Xu S, Corcoran S, Ferguson D, Weierstall U, Spence JCH, Cherezov V, Fromme P, Fischetti RF, Liu W.

IUCrJ. 2017 May 24;4(Pt 4):439-454. doi: 10.1107/S205225251700570X. eCollection 2017 Jul 1.

28.

A Bright Future for Serial Femtosecond Crystallography with XFELs.

Johansson LC, Stauch B, Ishchenko A, Cherezov V.

Trends Biochem Sci. 2017 Sep;42(9):749-762. doi: 10.1016/j.tibs.2017.06.007. Epub 2017 Jul 18. Review.

29.

Structural insights into the extracellular recognition of the human serotonin 2B receptor by an antibody.

Ishchenko A, Wacker D, Kapoor M, Zhang A, Han GW, Basu S, Patel N, Messerschmidt M, Weierstall U, Liu W, Katritch V, Roth BL, Stevens RC, Cherezov V.

Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):8223-8228. doi: 10.1073/pnas.1700891114. Epub 2017 Jul 17.

30.

Critical Role of Water Molecules in Proton Translocation by the Membrane-Bound Transhydrogenase.

Padayatti PS, Leung JH, Mahinthichaichan P, Tajkhorshid E, Ishchenko A, Cherezov V, Soltis SM, Jackson JB, Stout CD, Gennis RB, Zhang Q.

Structure. 2017 Jul 5;25(7):1111-1119.e3. doi: 10.1016/j.str.2017.05.022. Epub 2017 Jun 22.

31.

Crystallization of Membrane Proteins: An Overview.

Ishchenko A, Abola EE, Cherezov V.

Methods Mol Biol. 2017;1607:117-141. doi: 10.1007/978-1-4939-7000-1_5. Review.

PMID:
28573571
32.

Mechanism of transmembrane signaling by sensor histidine kinases.

Gushchin I, Melnikov I, Polovinkin V, Ishchenko A, Yuzhakova A, Buslaev P, Bourenkov G, Grudinin S, Round E, Balandin T, Borshchevskiy V, Willbold D, Leonard G, Büldt G, Popov A, Gordeliy V.

Science. 2017 Jun 9;356(6342). pii: eaah6345. doi: 10.1126/science.aah6345. Epub 2017 May 18.

PMID:
28522691
33.

Crystal structure of a multi-domain human smoothened receptor in complex with a super stabilizing ligand.

Zhang X, Zhao F, Wu Y, Yang J, Han GW, Zhao S, Ishchenko A, Ye L, Lin X, Ding K, Dharmarajan V, Griffin PR, Gati C, Nelson G, Hunter MS, Hanson MA, Cherezov V, Stevens RC, Tan W, Tao H, Xu F.

Nat Commun. 2017 May 17;8:15383. doi: 10.1038/ncomms15383.

34.

Structural basis for selectivity and diversity in angiotensin II receptors.

Zhang H, Han GW, Batyuk A, Ishchenko A, White KL, Patel N, Sadybekov A, Zamlynny B, Rudd MT, Hollenstein K, Tolstikova A, White TA, Hunter MS, Weierstall U, Liu W, Babaoglu K, Moore EL, Katz RD, Shipman JM, Garcia-Calvo M, Sharma S, Sheth P, Soisson SM, Stevens RC, Katritch V, Cherezov V.

Nature. 2017 Apr 20;544(7650):327-332. doi: 10.1038/nature22035. Epub 2017 Apr 5.

35.

The unusual solvatochromism and solvatofluorochromism of longwave absorbing and emitting barbiturate merocyanine dyes.

Ishchenko AA, Kulinich AV.

Methods Appl Fluoresc. 2016 Jul 12;4(3):034001. doi: 10.1088/2050-6120/4/3/034001.

PMID:
28355148
36.

New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.

Ishchenko A, Round E, Borshchevskiy V, Grudinin S, Gushchin I, Klare JP, Remeeva A, Polovinkin V, Utrobin P, Balandin T, Engelhard M, Büldt G, Gordeliy V.

Sci Rep. 2017 Feb 6;7:41811. doi: 10.1038/srep41811.

37.

The major Arabidopsis thaliana apurinic/apyrimidinic endonuclease, ARP is involved in the plant nucleotide incision repair pathway.

Akishev Z, Taipakova S, Joldybayeva B, Zutterling C, Smekenov I, Ishchenko AA, Zharkov DO, Bissenbaev AK, Saparbaev M.

DNA Repair (Amst). 2016 Dec;48:30-42. doi: 10.1016/j.dnarep.2016.10.009. Epub 2016 Oct 29.

PMID:
27836324
38.

Poly(ADP-ribose) polymerases covalently modify strand break termini in DNA fragments in vitro.

Talhaoui I, Lebedeva NA, Zarkovic G, Saint-Pierre C, Kutuzov MM, Sukhanova MV, Matkarimov BT, Gasparutto D, Saparbaev MK, Lavrik OI, Ishchenko AA.

Nucleic Acids Res. 2016 Nov 2;44(19):9279-9295. Epub 2016 Jul 28.

39.

Preparation and Delivery of Protein Microcrystals in Lipidic Cubic Phase for Serial Femtosecond Crystallography.

Ishchenko A, Cherezov V, Liu W.

J Vis Exp. 2016 Sep 20;(115). doi: 10.3791/54463.

40.

Native phasing of x-ray free-electron laser data for a G protein-coupled receptor.

Batyuk A, Galli L, Ishchenko A, Han GW, Gati C, Popov PA, Lee MY, Stauch B, White TA, Barty A, Aquila A, Hunter MS, Liang M, Boutet S, Pu M, Liu ZJ, Nelson G, James D, Li C, Zhao Y, Spence JC, Liu W, Fromme P, Katritch V, Weierstall U, Stevens RC, Cherezov V.

Sci Adv. 2016 Sep 23;2(9):e1600292. eCollection 2016 Sep.

41.

Synthesis, electronic structure and spectral fluorescent properties of vinylogous merocyanines derived from 1,3-dialkyl-benzimidazole and malononitrile.

Kulinich AV, Mikitenko EK, Ishchenko AA.

Spectrochim Acta A Mol Biomol Spectrosc. 2017 Jan 15;171:317-324. doi: 10.1016/j.saa.2016.08.015. Epub 2016 Aug 13.

PMID:
27566917
42.

Serial femtosecond crystallography datasets from G protein-coupled receptors.

White TA, Barty A, Liu W, Ishchenko A, Zhang H, Gati C, Zatsepin NA, Basu S, Oberthür D, Metz M, Beyerlein KR, Yoon CH, Yefanov OM, James D, Wang D, Messerschmidt M, Koglin JE, Boutet S, Weierstall U, Cherezov V.

Sci Data. 2016 Aug 1;3:160057. doi: 10.1038/sdata.2016.57.

43.

Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.

Redrejo-Rodríguez M, Vigouroux A, Mursalimov A, Grin I, Alili D, Koshenov Z, Akishev Z, Maksimenko A, Bissenbaev AK, Matkarimov BT, Saparbaev M, Ishchenko AA, Moréra S.

Biochimie. 2016 Sep-Oct;128-129:20-33. doi: 10.1016/j.biochi.2016.06.011. Epub 2016 Jun 22.

44.

TET2-mediated 5-hydroxymethylcytosine induces genetic instability and mutagenesis.

Mahfoudhi E, Talhaoui I, Cabagnols X, Della Valle V, Secardin L, Rameau P, Bernard OA, Ishchenko AA, Abbes S, Vainchenker W, Saparbaev M, Plo I.

DNA Repair (Amst). 2016 Jul;43:78-88. doi: 10.1016/j.dnarep.2016.05.031. Epub 2016 May 24.

PMID:
27289557
45.

New Efficient Organic Scintillators Derived from Pyrazoline.

Bliznyuk VN, Seliman AF, Ishchenko AA, Derevyanko NA, DeVol TA.

ACS Appl Mater Interfaces. 2016 May 25;8(20):12843-51. doi: 10.1021/acsami.6b02719. Epub 2016 May 10.

PMID:
27163887
46.

Safety and Efficacy of Biological Disease-Modifying Antirheumatic Drugs in Older Rheumatoid Arthritis Patients: Staying the Distance.

Ishchenko A, Lories RJ.

Drugs Aging. 2016 Jun;33(6):387-98. doi: 10.1007/s40266-016-0374-1. Review.

PMID:
27154398
47.

X-ray laser diffraction for structure determination of the rhodopsin-arrestin complex.

Zhou XE, Gao X, Barty A, Kang Y, He Y, Liu W, Ishchenko A, White TA, Yefanov O, Han GW, Xu Q, de Waal PW, Suino-Powell KM, Boutet S, Williams GJ, Wang M, Li D, Caffrey M, Chapman HN, Spence JC, Fromme P, Weierstall U, Stevens RC, Cherezov V, Melcher K, Xu HE.

Sci Data. 2016 Apr 12;3:160021. doi: 10.1038/sdata.2016.21.

48.

An interplay of the base excision repair and mismatch repair pathways in active DNA demethylation.

Grin I, Ishchenko AA.

Nucleic Acids Res. 2016 May 5;44(8):3713-27. doi: 10.1093/nar/gkw059. Epub 2016 Feb 3.

49.

Scope of negative solvatochromism and solvatofluorochromism of merocyanines.

Kulinich AV, Mikitenko EK, Ishchenko AA.

Phys Chem Chem Phys. 2016 Feb 7;18(5):3444-53. doi: 10.1039/c5cp06653k.

PMID:
26743674
50.

[Method of Surgical Management of Genital Prolapse with Cervical Elongation].

Ishchenko AI, Aleksandrov LS, Ishchenko AA, Hudoley EP.

Vestn Ross Akad Med Nauk. 2016;71(6):413-9. doi: 10.15690/vramn727. Russian.

PMID:
29298001

Supplemental Content

Loading ...
Support Center