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Items: 40

1.

Integrated genomic epidemiology and phenotypic profiling of Clostridium difficile across intra-hospital and community populations in Colombia.

Muñoz M, Restrepo-Montoya D, Kumar N, Iraola G, Camargo M, Díaz-Arévalo D, Roa-Molina NS, Tellez MA, Herrera G, Ríos-Chaparro DI, Birchenall C, Pinilla D, Pardo-Oviedo JM, Rodríguez-Leguizamón G, Josa DF, Lawley TD, Patarroyo MA, Ramírez JD.

Sci Rep. 2019 Aug 5;9(1):11293. doi: 10.1038/s41598-019-47688-2.

2.

Polyclonal Campylobacter fetus infections among unrelated patients, Montevideo, Uruguay, 2013-2018.

Costa D, Betancor L, Gadea P, Cabezas L, Caiata L, Palacio R, Seija V, Galiana A, Vieytes M, Cristophersen I, Calleros L, Iraola G.

Clin Infect Dis. 2019 Jul 15. pii: ciz657. doi: 10.1093/cid/ciz657. [Epub ahead of print]

PMID:
31309972
3.

Comparative genomics identifies potential virulence factors in Clostridium tertium and C. paraputrificum.

Muñoz M, Restrepo-Montoya D, Kumar N, Iraola G, Herrera G, Ríos-Chaparro DI, Díaz-Arévalo D, Patarroyo MA, Lawley TD, Ramírez JD.

Virulence. 2019 Dec;10(1):657-676. doi: 10.1080/21505594.2019.1637699.

4.

Pathogenomics of Emerging Campylobacter Species.

Costa D, Iraola G.

Clin Microbiol Rev. 2019 Jul 3;32(4). pii: e00072-18. doi: 10.1128/CMR.00072-18. Print 2019 Sep 18. Review.

PMID:
31270126
5.

Nanopore Sequencing Significantly Improves Genome Assembly of the Protozoan Parasite Trypanosoma cruzi.

Díaz-Viraqué F, Pita S, Greif G, de Souza RCM, Iraola G, Robello C.

Genome Biol Evol. 2019 Jul 1;11(7):1952-1957. doi: 10.1093/gbe/evz129.

6.

Correction: The fecal, oral, and skin microbiota of children with Chagas disease treated with benznidazole.

Robello C, Maldonado DP, Hevia A, Hoashi M, Frattaroli P, Montacutti V, Heguy A, Dolgalev I, Mojica M, Iraola G, Dominguez-Bello MG.

PLoS One. 2019 Apr 4;14(4):e0215199. doi: 10.1371/journal.pone.0215199. eCollection 2019.

7.

Urban metagenomics uncover antibiotic resistance reservoirs in coastal beach and sewage waters.

Fresia P, Antelo V, Salazar C, Giménez M, D'Alessandro B, Afshinnekoo E, Mason C, Gonnet GH, Iraola G.

Microbiome. 2019 Feb 28;7(1):35. doi: 10.1186/s40168-019-0648-z.

8.

The fecal, oral, and skin microbiota of children with Chagas disease treated with benznidazole.

Robello C, Maldonado DP, Hevia A, Hoashi M, Frattaroli P, Montacutti V, Heguy A, Dolgalev I, Mojica M, Iraola G, Dominguez-Bello MG.

PLoS One. 2019 Feb 26;14(2):e0212593. doi: 10.1371/journal.pone.0212593. eCollection 2019. Erratum in: PLoS One. 2019 Apr 4;14(4):e0215199.

9.

The Tritryps Comparative Repeatome: Insights on Repetitive Element Evolution in Trypanosomatid Pathogens.

Pita S, Díaz-Viraqué F, Iraola G, Robello C.

Genome Biol Evol. 2019 Feb 1;11(2):546-551. doi: 10.1093/gbe/evz017.

10.

First Release of the Bacterial Biobank of the Urban Environment (BBUE).

Antelo V, Salazar C, Martínez A, D'Alessandro B, Castro M, Betancor L, Barcala MV, Míguez D, Gonnet GH, Iraola G.

Microbiol Resour Announc. 2018 Oct 25;7(16). pii: e01201-18. doi: 10.1128/MRA.01201-18. eCollection 2018 Oct.

11.

Surveying what's flushed away.

Iraola G, Kumar N.

Nat Rev Microbiol. 2018 Aug;16(8):456. doi: 10.1038/s41579-018-0047-7. No abstract available.

PMID:
29930288
12.

MLSTar: automatic multilocus sequence typing of bacterial genomes in R.

Ferrés I, Iraola G.

PeerJ. 2018 Jun 15;6:e5098. doi: 10.7717/peerj.5098. eCollection 2018.

13.

Biodiversity of Environmental Leptospira: Improving Identification and Revisiting the Diagnosis.

Thibeaux R, Girault D, Bierque E, Soupé-Gilbert ME, Rettinger A, Douyère A, Meyer M, Iraola G, Picardeau M, Goarant C.

Front Microbiol. 2018 May 1;9:816. doi: 10.3389/fmicb.2018.00816. eCollection 2018.

14.

Inter- and intracontinental migrations and local differentiation have shaped the contemporary epidemiological landscape of canine parvovirus in South America.

Grecco S, Iraola G, Decaro N, Alfieri A, Alfieri A, Gallo Calderón M, da Silva AP, Name D, Aldaz J, Calleros L, Marandino A, Tomás G, Maya L, Francia L, Panzera Y, Pérez R.

Virus Evol. 2018 Apr 9;4(1):vey011. doi: 10.1093/ve/vey011. eCollection 2018 Jan.

15.

Deciphering the unexplored Leptospira diversity from soils uncovers genomic evolution to virulence.

Thibeaux R, Iraola G, Ferrés I, Bierque E, Girault D, Soupé-Gilbert ME, Picardeau M, Goarant C.

Microb Genom. 2018 Jan;4(1). doi: 10.1099/mgen.0.000144. Epub 2018 Jan 3.

16.

Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates.

Lasserre M, Fresia P, Greif G, Iraola G, Castro-Ramos M, Juambeltz A, Nuñez Á, Naya H, Robello C, Berná L.

BMC Genomics. 2018 Jan 2;19(1):2. doi: 10.1186/s12864-017-4249-6.

17.

Leptospira venezuelensis sp. nov., a new member of the intermediate group isolated from rodents, cattle and humans.

Puche R, Ferrés I, Caraballo L, Rangel Y, Picardeau M, Takiff H, Iraola G.

Int J Syst Evol Microbiol. 2018 Feb;68(2):513-517. doi: 10.1099/ijsem.0.002528. Epub 2017 Dec 14.

PMID:
29239713
18.

Distinct Campylobacter fetus lineages adapted as livestock pathogens and human pathobionts in the intestinal microbiota.

Iraola G, Forster SC, Kumar N, Lehours P, Bekal S, García-Peña FJ, Paolicchi F, Morsella C, Hotzel H, Hsueh PR, Vidal A, Lévesque S, Yamazaki W, Balzan C, Vargas A, Piccirillo A, Chaban B, Hill JE, Betancor L, Collado L, Truyers I, Midwinter AC, Dagi HT, Mégraud F, Calleros L, Pérez R, Naya H, Lawley TD.

Nat Commun. 2017 Nov 8;8(1):1367. doi: 10.1038/s41467-017-01449-9.

19.

Genomic and clinical evidence uncovers the enterohepatic species Helicobacter valdiviensis as a potential human intestinal pathogen.

Fresia P, Jara R, Sierra R, Ferrés I, Greif G, Iraola G, Collado L.

Helicobacter. 2017 Oct;22(5). doi: 10.1111/hel.12425. Epub 2017 Aug 11.

PMID:
28799681
20.

Campylobacter ornithocola sp. nov., a novel member of the Campylobacter lari group isolated from wild bird faecal samples.

Cáceres A, Muñoz I, Iraola G, Díaz-Viraqué F, Collado L.

Int J Syst Evol Microbiol. 2017 Jun;67(6):1643-1649. doi: 10.1099/ijsem.0.001822. Epub 2017 Jun 20.

21.

A novel real-time PCR assay for quantitative detection of Campylobacter fetus based on ribosomal sequences.

Iraola G, Pérez R, Betancor L, Marandino A, Morsella C, Méndez A, Paolicchi F, Piccirillo A, Tomás G, Velilla A, Calleros L.

BMC Vet Res. 2016 Dec 15;12(1):286.

22.

Assessing the intra-species genetic variability in the clonal pathogen Campylobacter fetus: CRISPRs are highly polymorphic DNA markers.

Calleros L, Betancor L, Iraola G, Méndez A, Morsella C, Paolicchi F, Silveyra S, Velilla A, Pérez R.

J Microbiol Methods. 2017 Jan;132:86-94. doi: 10.1016/j.mimet.2016.11.012. Epub 2016 Nov 17.

PMID:
27867047
23.

Transcriptome Sequencing Reveals Wide Expression Reprogramming of Basal and Unknown Genes in Leptospira biflexa Biofilms.

Iraola G, Spangenberg L, Lopes Bastos B, Graña M, Vasconcelos L, Almeida Á, Greif G, Robello C, Ristow P, Naya H.

mSphere. 2016 Apr 6;1(2). pii: e00042-16. doi: 10.1128/mSphere.00042-16. eCollection 2016 Mar-Apr.

24.

Campylobacter geochelonis sp. nov. isolated from the western Hermann's tortoise (Testudo hermanni hermanni).

Piccirillo A, Niero G, Calleros L, Pérez R, Naya H, Iraola G.

Int J Syst Evol Microbiol. 2016 Sep;66(9):3468-3476. doi: 10.1099/ijsem.0.001219. Epub 2016 Jun 6.

PMID:
27266587
25.

Whole-Genome Sequences of Mycobacterium bovis Strain MbURU-001, Isolated from Fresh Bovine Infected Samples.

Lasserre M, Berná L, Greif G, Díaz-Viraqué F, Iraola G, Naya H, Castro-Ramos M, Juambeltz A, Robello C.

Genome Announc. 2015 Nov 5;3(6). pii: e01237-15. doi: 10.1128/genomeA.01237-15.

26.

Molecular phylogeography of canine distemper virus: Geographic origin and global spreading.

Panzera Y, Sarute N, Iraola G, Hernández M, Pérez R.

Mol Phylogenet Evol. 2015 Nov;92:147-54. doi: 10.1016/j.ympev.2015.06.015. Epub 2015 Jul 4.

PMID:
26151219
27.

A rural worker infected with a bovine-prevalent genotype of Campylobacter fetus subsp. fetus supports zoonotic transmission and inconsistency of MLST and whole-genome typing.

Iraola G, Betancor L, Calleros L, Gadea P, Algorta G, Galeano S, Muxi P, Greif G, Pérez R.

Eur J Clin Microbiol Infect Dis. 2015 Aug;34(8):1593-6. doi: 10.1007/s10096-015-2393-y. Epub 2015 Apr 29.

PMID:
25920493
28.

Genetic characterization of South American infectious bursal disease virus reveals the existence of a distinct worldwide-spread genetic lineage.

Hernández M, Tomás G, Marandino A, Iraola G, Maya L, Mattion N, Hernández D, Villegas P, Banda A, Panzera Y, Pérez R.

Avian Pathol. 2015;44(3):212-21. doi: 10.1080/03079457.2015.1025696. Epub 2015 Apr 2.

PMID:
25746415
29.

Phylodynamic analysis of avian infectious bronchitis virus in South America.

Marandino A, Pereda A, Tomás G, Hernández M, Iraola G, Craig MI, Hernández D, Banda A, Villegas P, Panzera Y, Pérez R.

J Gen Virol. 2015 Jun;96(Pt 6):1340-6. doi: 10.1099/vir.0.000077. Epub 2015 Feb 9.

PMID:
25667323
30.

Phylogenetic and genome-wide deep-sequencing analyses of canine parvovirus reveal co-infection with field variants and emergence of a recent recombinant strain.

Pérez R, Calleros L, Marandino A, Sarute N, Iraola G, Grecco S, Blanc H, Vignuzzi M, Isakov O, Shomron N, Carrau L, Hernández M, Francia L, Sosa K, Tomás G, Panzera Y.

PLoS One. 2014 Nov 3;9(11):e111779. doi: 10.1371/journal.pone.0111779. eCollection 2014.

31.

Genomic evidence for the emergence and evolution of pathogenicity and niche preferences in the genus Campylobacter.

Iraola G, Pérez R, Naya H, Paolicchi F, Pastor E, Valenzuela S, Calleros L, Velilla A, Hernández M, Morsella C.

Genome Biol Evol. 2014 Sep 4;6(9):2392-405. doi: 10.1093/gbe/evu195.

32.

Whole-Genome Sequencing of an Isoniazid-Resistant Clinical Isolate of Mycobacterium tuberculosis Strain MtURU-002 from Uruguay.

Berná L, Iraola G, Greif G, Coitinho C, Rivas CM, Naya H, Robello C.

Genome Announc. 2014 Jul 17;2(4). pii: e00655-14. doi: 10.1128/genomeA.00655-14.

33.

Complete Genome Sequence of Mycobacterium tuberculosis Strain MtURU-001, Isolated from a Rapidly Progressing Outbreak in Uruguay.

Greif G, Iraola G, Berná L, Coitinho C, Rivas CM, Naya H, Robello C.

Genome Announc. 2014 Jan 23;2(1). pii: e01220-13. doi: 10.1128/genomeA.01220-13.

34.

Complete Genome Sequence of Campylobacter fetus subsp. venerealis Biovar Intermedius, Isolated from the Prepuce of a Bull.

Iraola G, Pérez R, Naya H, Paolicchi F, Harris D, Lawley TD, Rego N, Hernández M, Calleros L, Carretto L, Velilla A, Morsella C, Méndez A, Gioffre A.

Genome Announc. 2013 Aug 1;1(4). pii: e00526-13. doi: 10.1128/genomeA.00526-13.

35.

High local genetic diversity of canine parvovirus from Ecuador.

Aldaz J, García-Díaz J, Calleros L, Sosa K, Iraola G, Marandino A, Hernández M, Panzera Y, Pérez R.

Vet Microbiol. 2013 Sep 27;166(1-2):214-9. doi: 10.1016/j.vetmic.2013.06.012. Epub 2013 Jun 21.

PMID:
23850438
36.

Differential expression of glycerol-3-phosphate dehydrogenase isoforms in flight muscles of the Chagas disease vector Triatoma infestans (Hemiptera, Reduviidae).

Stroppa MM, Lagunas MS, Carriazo CS, Garcia BA, Iraola G, Panzera Y, Gerez de Burgos NM.

Am J Trop Med Hyg. 2013 Jun;88(6):1146-51. doi: 10.4269/ajtmh.12-0464. Epub 2013 Apr 8.

37.

Phylodynamics analysis of canine parvovirus in Uruguay: evidence of two successive invasions by different variants.

Maya L, Calleros L, Francia L, Hernández M, Iraola G, Panzera Y, Sosa K, Pérez R.

Arch Virol. 2013 Jun;158(6):1133-41. doi: 10.1007/s00705-012-1591-5. Epub 2013 Jan 8.

PMID:
23297117
38.

Application of a multiplex PCR assay for Campylobacter fetus detection and subspecies differentiation in uncultured samples of aborted bovine fetuses.

Iraola G, Hernández M, Calleros L, Paolicchi F, Silveyra S, Velilla A, Carretto L, Rodríguez E, Pérez R.

J Vet Sci. 2012 Dec;13(4):371-6.

39.

Reduced set of virulence genes allows high accuracy prediction of bacterial pathogenicity in humans.

Iraola G, Vazquez G, Spangenberg L, Naya H.

PLoS One. 2012;7(8):e42144. doi: 10.1371/journal.pone.0042144. Epub 2012 Aug 6.

40.

Renal dysplasia/hypoplasia, Williams Syndrome phenotype and non-Hodgkin lymphoma in the same patient: only a coincidence?

Urisarri-Ruiz de Cortázar A, Calvo MG, Donsión MV, Iraola GA, Sánchez JM.

Pediatr Nephrol. 2009 May;24(5):1081-4. doi: 10.1007/s00467-008-1069-6. Epub 2008 Dec 9.

PMID:
19066974

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