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Items: 37

1.

Metal accumulation capacity in indigenous Alaska vegetation growing on military training lands.

Busby RR, Douglas TA, LeMonte JJ, Ringelberg DB, Indest KJ.

Int J Phytoremediation. 2019 Sep 3:1-8. doi: 10.1080/15226514.2019.1658708. [Epub ahead of print]

PMID:
31478391
2.

Effects of chitin and temperature on sub-Arctic soil microbial and fungal communities and biodegradation of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) and 2,4-dinitrotoluene (DNT).

Crocker FH, Jung CM, Indest KJ, Everman SJ, Carr MR.

Biodegradation. 2019 Jun 27. doi: 10.1007/s10532-019-09884-9. [Epub ahead of print]

PMID:
31250271
3.

Enhanced plasmid-mediated bioaugmentation of RDX-contaminated matrices in column studies using donor strain Gordonia sp. KTR9.

Jung CM, Carr M, Blakeney GA, Indest KJ.

J Ind Microbiol Biotechnol. 2019 Oct;46(9-10):1273-1281. doi: 10.1007/s10295-019-02185-3. Epub 2019 May 22.

PMID:
31119503
4.

Detection of hexahydro-1,3-5-trinitro-1,3,5-triazine (RDX) with a microbial sensor.

Eberly JO, Mayo ML, Carr MR, Crocker FH, Indest KJ.

J Gen Appl Microbiol. 2019 Jul 19;65(3):145-150. doi: 10.2323/jgam.2018.08.001. Epub 2019 Jan 29.

5.

Rhizosphere Microbial Communities of Spartina alterniflora and Juncus roemerianus From Restored and Natural Tidal Marshes on Deer Island, Mississippi.

Mavrodi OV, Jung CM, Eberly JO, Hendry SV, Namjilsuren S, Biber PD, Indest KJ, Mavrodi DV.

Front Microbiol. 2018 Dec 11;9:3049. doi: 10.3389/fmicb.2018.03049. eCollection 2018.

6.

Effects of acute exposures of 2,4,6-trinitrotoluene and inorganic lead on the fecal microbiome of the green anole (Anolis carolinensis).

Indest KJ, Everman SJ, Lindsay JH, Jung CM, Smith JC, Newell SB.

PLoS One. 2018 Dec 6;13(12):e0208281. doi: 10.1371/journal.pone.0208281. eCollection 2018.

7.

RDX degradation in bioaugmented model aquifer columns under aerobic and low oxygen conditions.

Fuller ME, Hatzinger PB, Condee CW, Andaya C, Rezes R, Michalsen MM, Crocker FH, Indest KJ, Jung CM, Alon Blakeney G, Istok JD, Hammett SA.

Appl Microbiol Biotechnol. 2017 Jul;101(13):5557-5567. doi: 10.1007/s00253-017-8269-6. Epub 2017 Apr 17.

PMID:
28417168
8.

Biodegradation of insensitive munition formulations IMX101 and IMX104 in surface soils.

Indest KJ, Hancock DE, Crocker FH, Eberly JO, Jung CM, Blakeney GA, Brame J, Chappell MA.

J Ind Microbiol Biotechnol. 2017 Jul;44(7):987-995. doi: 10.1007/s10295-017-1930-3. Epub 2017 Mar 3.

PMID:
28258407
9.

Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation.

Pathak A, Chauhan A, Blom J, Indest KJ, Jung CM, Stothard P, Bera G, Green SJ, Ogram A.

PLoS One. 2016 Aug 17;11(8):e0161032. doi: 10.1371/journal.pone.0161032. eCollection 2016.

10.

Rhodococcus jostii RHA1 TadA-homolog deletion mutants accumulate less polyhydroxyalkanoates (PHAs) than the parental strain.

Indest KJ, Eberly JO, Hancock DE, Jung CM, Carr MR, Blakeney GA.

J Gen Appl Microbiol. 2016 Sep 12;62(4):213-6. doi: 10.2323/jgam.2016.03.002. Epub 2016 Aug 4. No abstract available.

11.

Evaluation of Biostimulation and Bioaugmentation To Stimulate Hexahydro-1,3,5-trinitro-1,3,5,-triazine Degradation in an Aerobic Groundwater Aquifer.

Michalsen MM, King AS, Rule RA, Fuller ME, Hatzinger PB, Condee CW, Crocker FH, Indest KJ, Jung CM, Istok JD.

Environ Sci Technol. 2016 Jul 19;50(14):7625-32. doi: 10.1021/acs.est.6b00630. Epub 2016 Jul 7.

PMID:
27301804
12.

Metagenomic analysis of denitrifying wastewater enrichment cultures able to transform the explosive, 3-nitro-1,2,4-triazol-5-one (NTO).

Eberly JO, Indest KJ, Hancock DE, Jung CM, Crocker FH.

J Ind Microbiol Biotechnol. 2016 Jun;43(6):795-805. doi: 10.1007/s10295-016-1755-5. Epub 2016 Mar 31.

PMID:
27033535
13.

Expression and characterization of an N-oxygenase from Rhodococcus jostii RHAI.

Indest KJ, Eberly JO, Hancock DE.

J Gen Appl Microbiol. 2015;61(6):217-23. doi: 10.2323/jgam.61.217.

14.

Evaluation of microbial transport during aerobic bioaugmentation of an RDX-contaminated aquifer.

Crocker FH, Indest KJ, Jung CM, Hancock DE, Fuller ME, Hatzinger PB, Vainberg S, Istok JD, Wilson E, Michalsen MM.

Biodegradation. 2015 Nov;26(6):443-51. doi: 10.1007/s10532-015-9746-1. Epub 2015 Oct 5.

PMID:
26438043
15.

Laboratory evaluation of bioaugmentation for aerobic treatment of RDX in groundwater.

Fuller ME, Hatzinger PB, Condee CW, Andaya C, Vainberg S, Michalsen MM, Crocker FH, Indest KJ, Jung CM, Eaton H, Istok JD.

Biodegradation. 2015 Feb;26(1):77-89. doi: 10.1007/s10532-014-9717-y. Epub 2014 Dec 12.

PMID:
25503243
16.

The effects of putative lipase and wax ester synthase/acyl-CoA:diacylglycerol acyltransferase gene knockouts on triacylglycerol accumulation in Gordonia sp. KTR9.

Indest KJ, Eberly JO, Ringelberg DB, Hancock DE.

J Ind Microbiol Biotechnol. 2015 Feb;42(2):219-27. doi: 10.1007/s10295-014-1552-y. Epub 2014 Dec 9.

PMID:
25487758
17.

The essential role of nitrogen limitation in expression of xplA and degradation of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) in Gordonia sp. strain KTR9.

Zhu SH, Reuther J, Liu J, Crocker FH, Indest KJ, Eltis LD, Mohn WW.

Appl Microbiol Biotechnol. 2015 Jan;99(1):459-67. doi: 10.1007/s00253-014-6013-z. Epub 2014 Aug 22.

PMID:
25142696
18.

Coral-zooxanthellae meta-transcriptomics reveals integrated response to pollutant stress.

Gust KA, Najar FZ, Habib T, Lotufo GR, Piggot AM, Fouke BW, Laird JG, Wilbanks MS, Rawat A, Indest KJ, Roe BA, Perkins EJ.

BMC Genomics. 2014 Jul 12;15:591. doi: 10.1186/1471-2164-15-591.

19.

Biotransformation of explosives by Reticulitermes flavipes--associated termite Endosymbionts.

Indest KJ, Eaton HL, Jung CM, Lounds CB.

J Mol Microbiol Biotechnol. 2014;24(2):114-9. doi: 10.1159/000361027. Epub 2014 May 17.

PMID:
24854223
20.

Role of nitrogen limitation in transformation of RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) by Gordonia sp. strain KTR9.

Indest KJ, Hancock DE, Jung CM, Eberly JO, Mohn WW, Eltis LD, Crocker FH.

Appl Environ Microbiol. 2013 Mar;79(5):1746-50. doi: 10.1128/AEM.03905-12. Epub 2012 Dec 28.

21.

Physiological characterization of lipid accumulation and in vivo ester formation in Gordonia sp. KTR9.

Eberly JO, Ringelberg DB, Indest KJ.

J Ind Microbiol Biotechnol. 2013 Feb;40(2):201-8. doi: 10.1007/s10295-012-1218-6. Epub 2012 Dec 4.

PMID:
23207981
22.

Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium.

Chen HP, Zhu SH, Casabon I, Hallam SJ, Crocker FH, Mohn WW, Indest KJ, Eltis LD.

Appl Environ Microbiol. 2012 Nov;78(21):7798-800. doi: 10.1128/AEM.02120-12. Epub 2012 Aug 24.

23.

Effects of C60 on the Salmonella typhimurium TA100 transcriptome expression: Insights into C60 -mediated growth inhibition and mutagenicity.

Hancock DE, Indest KJ, Gust KA, Kennedy AJ.

Environ Toxicol Chem. 2012 Jul;31(7):1438-44. doi: 10.1002/etc.1848. Epub 2012 May 16.

PMID:
22511527
24.

Involvement of cytochrome c CymA in the anaerobic metabolism of RDX by Shewanella oneidensis MR-1.

Perreault NN, Crocker FH, Indest KJ, Hawari J.

Can J Microbiol. 2012 Feb;58(2):124-31. doi: 10.1139/w11-116. Epub 2012 Jan 19.

PMID:
22260206
25.

Horizontal gene transfer (HGT) as a mechanism of disseminating RDX-degrading activity among Actinomycete bacteria.

Jung CM, Crocker FH, Eberly JO, Indest KJ.

J Appl Microbiol. 2011 Jun;110(6):1449-59. doi: 10.1111/j.1365-2672.2011.04995.x. Epub 2011 Mar 30.

26.

Functional characterization of pGKT2, a 182-kilobase plasmid containing the xplAB genes, which are involved in the degradation of hexahydro-1,3,5-trinitro-1,3,5-triazine by Gordonia sp. strain KTR9.

Indest KJ, Jung CM, Chen HP, Hancock D, Florizone C, Eltis LD, Crocker FH.

Appl Environ Microbiol. 2010 Oct;76(19):6329-37. doi: 10.1128/AEM.01217-10. Epub 2010 Aug 13.

27.

From raw materials to validated system: the construction of a genomic library and microarray to interpret systemic perturbations in Northern bobwhite.

Rawat A, Gust KA, Deng Y, Garcia-Reyero N, Quinn MJ Jr, Johnson MS, Indest KJ, Elasri MO, Perkins EJ.

Physiol Genomics. 2010 Jul 7;42(2):219-35. doi: 10.1152/physiolgenomics.00022.2010. Epub 2010 Apr 20.

28.

Workshop report: modeling the molecular mechanism of bacterial spore germination and elucidating reasons for germination heterogeneity.

Indest KJ, Buchholz WG, Faeder JR, Setlow P.

J Food Sci. 2009 Aug;74(6):R73-8. doi: 10.1111/j.1750-3841.2009.01245.x.

PMID:
19723224
29.

Neurotoxicogenomic investigations to assess mechanisms of action of the munitions constituents RDX and 2,6-DNT in Northern bobwhite (Colinus virginianus).

Gust KA, Pirooznia M, Quinn MJ Jr, Johnson MS, Escalon L, Indest KJ, Guan X, Clarke J, Deng Y, Gong P, Perkins EJ.

Toxicol Sci. 2009 Jul;110(1):168-80. doi: 10.1093/toxsci/kfp091. Epub 2009 May 5.

PMID:
19417177
30.

Toxicogenomic analysis provides new insights into molecular mechanisms of the sublethal toxicity of 2,4,6-trinitrotoluene in Eisenia fetida.

Gong P, Guan X, Inouye LS, Pirooznia M, Indest KJ, Athow RS, Deng Y, Perkins EJ.

Environ Sci Technol. 2007 Dec 1;41(23):8195-202.

PMID:
18186358
31.

Biodegradation of the cyclic nitramine explosives RDX, HMX, and CL-20.

Crocker FH, Indest KJ, Fredrickson HL.

Appl Microbiol Biotechnol. 2006 Nov;73(2):274-90. Epub 2006 Oct 21. Review.

PMID:
17058075
32.

A TaqMan polymerase chain reaction method for monitoring RDX-degrading bacteria based on the xplA functional gene.

Indest KJ, Crocker FH, Athow R.

J Microbiol Methods. 2007 Feb;68(2):267-74. Epub 2006 Sep 28.

PMID:
17010461
33.

Application of oligonucleotide microarrays for bacterial source tracking of environmental Enterococcus sp. isolates.

Indest KJ, Betts K, Furey JS.

Int J Environ Res Public Health. 2005 Apr;2(1):175-85.

34.

Analysis of Borrelia burgdorferi vlsE gene expression and recombination in the tick vector.

Indest KJ, Howell JK, Jacobs MB, Scholl-Meeker D, Norris SJ, Philipp MT.

Infect Immun. 2001 Nov;69(11):7083-90.

35.

Transcriptional regulation in spirochetes.

Indest KJ, Ramamoorthy R, Philipp MT.

J Mol Microbiol Biotechnol. 2000 Oct;2(4):473-81. Review.

PMID:
11075920
37.

Cell-density-dependent expression of Borrelia burgdorferi lipoproteins in vitro.

Indest KJ, Ramamoorthy R, Solé M, Gilmore RD, Johnson BJ, Philipp MT.

Infect Immun. 1997 Apr;65(4):1165-71.

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