Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 31

1.

Equilibrium in the Catalytic Condensation of Carboxylic Acids with Methyl Ketones to 1,3-Diketones and the Origin of the Reketonization Effect.

Ignatchenko AV, DiProspero TJ, Patel H, LaPenna JR.

ACS Omega. 2019 Jun 25;4(6):11032-11043. doi: 10.1021/acsomega.9b01188. eCollection 2019 Jun 30.

2.

N-Glycoproteomics of Patient-Derived Xenografts: A Strategy to Discover Tumor-Associated Proteins in High-Grade Serous Ovarian Cancer.

Sinha A, Hussain A, Ignatchenko V, Ignatchenko A, Tang KH, Ho VWH, Neel BG, Clarke B, Bernardini MQ, Ailles L, Kislinger T.

Cell Syst. 2019 Apr 24;8(4):345-351.e4. doi: 10.1016/j.cels.2019.03.011. Epub 2019 Apr 10.

3.

Updates in Rhea: SPARQLing biochemical reaction data.

Lombardot T, Morgat A, Axelsen KB, Aimo L, Hyka-Nouspikel N, Niknejad A, Ignatchenko A, Xenarios I, Coudert E, Redaschi N, Bridge A.

Nucleic Acids Res. 2019 Jan 8;47(D1):D596-D600. doi: 10.1093/nar/gky876.

4.

Proteomic Analysis of Cancer-Associated Fibroblasts Reveals a Paracrine Role for MFAP5 in Human Oral Tongue Squamous Cell Carcinoma.

Principe S, Mejia-Guerrero S, Ignatchenko V, Sinha A, Ignatchenko A, Shi W, Pereira K, Su S, Huang SH, O'Sullivan B, Xu W, Goldstein DP, Weinreb I, Ailles L, Liu FF, Kislinger T.

J Proteome Res. 2018 Jun 1;17(6):2045-2059. doi: 10.1021/acs.jproteome.7b00925. Epub 2018 May 2.

PMID:
29681158
5.

Proteomic Profiling of Secreted Proteins, Exosomes, and Microvesicles in Cell Culture Conditioned Media.

Sinha A, Principe S, Alfaro J, Ignatchenko A, Ignatchenko V, Kislinger T.

Methods Mol Biol. 2018;1722:91-102. doi: 10.1007/978-1-4939-7553-2_6.

PMID:
29264800
6.

Detecting protein variants by mass spectrometry: a comprehensive study in cancer cell-lines.

Alfaro JA, Ignatchenko A, Ignatchenko V, Sinha A, Boutros PC, Kislinger T.

Genome Med. 2017 Jul 18;9(1):62. doi: 10.1186/s13073-017-0454-9.

7.

Proteotranscriptomic Analysis Reveals Stage Specific Changes in the Molecular Landscape of Clear-Cell Renal Cell Carcinoma.

Neely BA, Wilkins CE, Marlow LA, Malyarenko D, Kim Y, Ignatchenko A, Sasinowska H, Sasinowski M, Nyalwidhe JO, Kislinger T, Copland JA, Drake RR.

PLoS One. 2016 Apr 29;11(4):e0154074. doi: 10.1371/journal.pone.0154074. eCollection 2016.

8.

Semi-supervised Learning Predicts Approximately One Third of the Alternative Splicing Isoforms as Functional Proteins.

Hao Y, Colak R, Teyra J, Corbi-Verge C, Ignatchenko A, Hahne H, Wilhelm M, Kuster B, Braun P, Kaida D, Kislinger T, Kim PM.

Cell Rep. 2015 Jul 14;12(2):183-9. doi: 10.1016/j.celrep.2015.06.031. Epub 2015 Jul 2.

9.

VennDIS: a JavaFX-based Venn and Euler diagram software to generate publication quality figures.

Ignatchenko V, Ignatchenko A, Sinha A, Boutros PC, Kislinger T.

Proteomics. 2015 Apr;15(7):1239-44. doi: 10.1002/pmic.201400320. Epub 2015 Jan 23.

PMID:
25545689
10.

Integrated omic analysis of lung cancer reveals metabolism proteome signatures with prognostic impact.

Li L, Wei Y, To C, Zhu CQ, Tong J, Pham NA, Taylor P, Ignatchenko V, Ignatchenko A, Zhang W, Wang D, Yanagawa N, Li M, Pintilie M, Liu G, Muthuswamy L, Shepherd FA, Tsao MS, Kislinger T, Moran MF.

Nat Commun. 2014 Nov 28;5:5469. doi: 10.1038/ncomms6469.

PMID:
25429762
11.

Integrated omic analysis of oropharyngeal carcinomas reveals human papillomavirus (HPV)-dependent regulation of the activator protein 1 (AP-1) pathway.

Sepiashvili L, Waggott D, Hui A, Shi W, Su S, Ignatchenko A, Ignatchenko V, Laureano M, Huang SH, Xu W, Weinreb I, Waldron J, O'Sullivan B, Irish JC, Boutros PC, Liu FF, Kislinger T.

Mol Cell Proteomics. 2014 Dec;13(12):3572-84. doi: 10.1074/mcp.M114.041764. Epub 2014 Sep 30.

12.

In-depth proteomic analyses of ovarian cancer cell line exosomes reveals differential enrichment of functional categories compared to the NCI 60 proteome.

Sinha A, Ignatchenko V, Ignatchenko A, Mejia-Guerrero S, Kislinger T.

Biochem Biophys Res Commun. 2014 Mar 21;445(4):694-701. doi: 10.1016/j.bbrc.2013.12.070. Epub 2014 Jan 14.

PMID:
24434149
13.

Proteomic profiling of the planarian Schmidtea mediterranea and its mucous reveals similarities with human secretions and those predicted for parasitic flatworms.

Bocchinfuso DG, Taylor P, Ross E, Ignatchenko A, Ignatchenko V, Kislinger T, Pearson BJ, Moran MF.

Mol Cell Proteomics. 2012 Sep;11(9):681-91. doi: 10.1074/mcp.M112.019026. Epub 2012 May 31.

14.

Translational analysis of mouse and human placental protein and mRNA reveals distinct molecular pathologies in human preeclampsia.

Cox B, Sharma P, Evangelou AI, Whiteley K, Ignatchenko V, Ignatchenko A, Baczyk D, Czikk M, Kingdom J, Rossant J, Gramolini AO, Adamson SL, Kislinger T.

Mol Cell Proteomics. 2011 Dec;10(12):M111.012526. doi: 10.1074/mcp.M111.012526. Epub 2011 Oct 10.

15.

Identification of novel ryanodine receptor 1 (RyR1) protein interaction with calcium homeostasis endoplasmic reticulum protein (CHERP).

Ryan T, Sharma P, Ignatchenko A, MacLennan DH, Kislinger T, Gramolini AO.

J Biol Chem. 2011 May 13;286(19):17060-8. doi: 10.1074/jbc.M110.197186. Epub 2011 Mar 14.

16.

In-depth proteomic analyses of direct expressed prostatic secretions.

Drake RR, Elschenbroich S, Lopez-Perez O, Kim Y, Ignatchenko V, Ignatchenko A, Nyalwidhe JO, Basu G, Wilkins CE, Gjurich B, Lance RS, Semmes OJ, Medin JA, Kislinger T.

J Proteome Res. 2010 May 7;9(5):2109-16. doi: 10.1021/pr1001498.

17.

Comparative systems biology of human and mouse as a tool to guide the modeling of human placental pathology.

Cox B, Kotlyar M, Evangelou AI, Ignatchenko V, Ignatchenko A, Whiteley K, Jurisica I, Adamson SL, Rossant J, Kislinger T.

Mol Syst Biol. 2009;5:279. doi: 10.1038/msb.2009.37. Epub 2009 Jun 16.

18.

Multidimensional protein identification technology analysis highlights mitoxantrone-induced expression modulations in the primary prostate cancer cell proteome.

Symes J, Evangelou A, Ignatchenko A, Fleshner N, Kislinger T, Medin JA.

Proteomics Clin Appl. 2009 Mar;3(3):347-58. doi: 10.1002/prca.200800102.

PMID:
26238752
19.

Sequential interval motif search: unrestricted database surveys of global MS/MS data sets for detection of putative post-translational modifications.

Liu J, Erassov A, Halina P, Canete M, Nguyen DV, Chung C, Cagney G, Ignatchenko A, Fong V, Emili A.

Anal Chem. 2008 Oct 15;80(20):7846-54. doi: 10.1021/ac8009017. Epub 2008 Sep 13.

PMID:
18788753
20.

Identification of pathways associated with invasive behavior by ovarian cancer cells using multidimensional protein identification technology (MudPIT).

Sodek KL, Evangelou AI, Ignatchenko A, Agochiya M, Brown TJ, Ringuette MJ, Jurisica I, Kislinger T.

Mol Biosyst. 2008 Jul;4(7):762-73. doi: 10.1039/b717542f. Epub 2008 Apr 17.

PMID:
18563251
21.

Consistent blind protein structure generation from NMR chemical shift data.

Shen Y, Lange O, Delaglio F, Rossi P, Aramini JM, Liu G, Eletsky A, Wu Y, Singarapu KK, Lemak A, Ignatchenko A, Arrowsmith CH, Szyperski T, Montelione GT, Baker D, Bax A.

Proc Natl Acad Sci U S A. 2008 Mar 25;105(12):4685-90. doi: 10.1073/pnas.0800256105. Epub 2008 Mar 7.

22.

A proteome resource of ovarian cancer ascites: integrated proteomic and bioinformatic analyses to identify putative biomarkers.

Gortzak-Uzan L, Ignatchenko A, Evangelou AI, Agochiya M, Brown KA, St Onge P, Kireeva I, Schmitt-Ulms G, Brown TJ, Murphy J, Rosen B, Shaw P, Jurisica I, Kislinger T.

J Proteome Res. 2008 Jan;7(1):339-51. Epub 2007 Dec 13.

PMID:
18076136
23.

In situ proteolysis for protein crystallization and structure determination.

Dong A, Xu X, Edwards AM; Midwest Center for Structural Genomics; Structural Genomics Consortium, Chang C, Chruszcz M, Cuff M, Cymborowski M, Di Leo R, Egorova O, Evdokimova E, Filippova E, Gu J, Guthrie J, Ignatchenko A, Joachimiak A, Klostermann N, Kim Y, Korniyenko Y, Minor W, Que Q, Savchenko A, Skarina T, Tan K, Yakunin A, Yee A, Yim V, Zhang R, Zheng H, Akutsu M, Arrowsmith C, Avvakumov GV, Bochkarev A, Dahlgren LG, Dhe-Paganon S, Dimov S, Dombrovski L, Finerty P Jr, Flodin S, Flores A, Gräslund S, Hammerström M, Herman MD, Hong BS, Hui R, Johansson I, Liu Y, Nilsson M, Nedyalkova L, Nordlund P, Nyman T, Min J, Ouyang H, Park HW, Qi C, Rabeh W, Shen L, Shen Y, Sukumard D, Tempel W, Tong Y, Tresagues L, Vedadi M, Walker JR, Weigelt J, Welin M, Wu H, Xiao T, Zeng H, Zhu H.

Nat Methods. 2007 Dec;4(12):1019-21. Epub 2007 Nov 4.

24.

Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling.

Kislinger T, Cox B, Kannan A, Chung C, Hu P, Ignatchenko A, Scott MS, Gramolini AO, Morris Q, Hallett MT, Rossant J, Hughes TR, Frey B, Emili A.

Cell. 2006 Apr 7;125(1):173-86.

25.

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Krogan NJ, Cagney G, Yu H, Zhong G, Guo X, Ignatchenko A, Li J, Pu S, Datta N, Tikuisis AP, Punna T, Peregrín-Alvarez JM, Shales M, Zhang X, Davey M, Robinson MD, Paccanaro A, Bray JE, Sheung A, Beattie B, Richards DP, Canadien V, Lalev A, Mena F, Wong P, Starostine A, Canete MM, Vlasblom J, Wu S, Orsi C, Collins SR, Chandran S, Haw R, Rilstone JJ, Gandi K, Thompson NJ, Musso G, St Onge P, Ghanny S, Lam MH, Butland G, Altaf-Ul AM, Kanaya S, Shilatifard A, O'Shea E, Weissman JS, Ingles CJ, Hughes TR, Parkinson J, Gerstein M, Wodak SJ, Emili A, Greenblatt JF.

Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.

PMID:
16554755
26.

Control of the Stereochemistry of Kinetic Protonation: Intramolecular Proton Delivery(1)(,)(2).

Zimmerman HE, Ignatchenko A.

J Org Chem. 1999 Sep 3;64(18):6635-6645.

PMID:
11674666
27.

[Isolation and purification of proteolytic enzymes on organo-silica sorbents with immobilized gramicidin S].

Ignatchenko AP, Bogomaz VI, Tugaĭ VA, Chuĭko AA.

Ukr Biokhim Zh (1978). 1987 Nov-Dec;59(6):28-33. Russian.

PMID:
2448932
28.

[Various properties of immobilized AMP-aminohydrolase].

Tugaĭ VA, Ignatchenko AP.

Ukr Biokhim Zh (1978). 1986 May-Jun;58(3):18-22. Russian.

PMID:
3727031
29.

[Bacterial interaction in a culture containing Pseudomonas and Mycobacterium in relation to hydrocarbon oxidation].

Koronelli TV, Komarova TI, Ignatchenko AV.

Mikrobiologiia. 1984 Mar-Apr;53(2):213-7. Russian.

PMID:
6429488
30.

[Role of emulsification in the process of hydrocarbon absorption by Pseudomonas aeruginosa cells].

Koronelli TV, Komarova TI, Ignatchenko AV.

Mikrobiologiia. 1983 Jan-Feb;52(1):94-7. Russian.

PMID:
6405134
31.

[Section on tablets in the 9th edition of the pharmacopeia].

NOSOVITSKAIA SA, IGNATCHENKO AT.

Aptechn Delo. 1955 May-Jun;4(3):47-50. Russian. No abstract available.

PMID:
14388659

Supplemental Content

Loading ...
Support Center