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Items: 1 to 50 of 208

1.

Translational control of antibiotic resistance.

Witzky A, Tollerson R 2nd, Ibba M.

Open Biol. 2019 Jul 26;9(7):190051. doi: 10.1098/rsob.190051. Epub 2019 Jul 10.

2.

Biophysical characterization Of Alpers encephalopathy associated mutants of human mitochondrial phenylalanyl-tRNA synthetase.

Chakraborty S, Ibba M, Banerjee R.

IUBMB Life. 2019 Aug;71(8):1141-1149. doi: 10.1002/iub.2114. Epub 2019 Jun 26.

PMID:
31241862
3.

Regulation of tRNA-dependent translational quality control.

Steiner RE, Ibba M.

IUBMB Life. 2019 Aug;71(8):1150-1157. doi: 10.1002/iub.2080. Epub 2019 May 28. Review.

PMID:
31135095
4.

Oxidation of phenylalanyl-tRNA synthetase positively regulates translational quality control.

Steiner RE, Kyle AM, Ibba M.

Proc Natl Acad Sci U S A. 2019 May 14;116(20):10058-10063. doi: 10.1073/pnas.1901634116. Epub 2019 Apr 29.

PMID:
31036643
5.

Elongation factor P is required to maintain proteome homeostasis at high growth rate.

Tollerson R 2nd, Witzky A, Ibba M.

Proc Natl Acad Sci U S A. 2018 Oct 23;115(43):11072-11077. doi: 10.1073/pnas.1812025115. Epub 2018 Oct 8.

6.

FARS2 mutations presenting with pure spastic paraplegia and lesions of the dentate nuclei.

Sahai SK, Steiner RE, Au MG, Graham JM, Salamon N, Ibba M, Pierson TM.

Ann Clin Transl Neurol. 2018 Aug 14;5(9):1128-1133. doi: 10.1002/acn3.598. eCollection 2018 Sep.

7.

Codon usage revisited: Lack of correlation between codon usage and the number of tRNA genes in enterobacteria.

Rojas J, Castillo G, Leiva LE, Elgamal S, Orellana O, Ibba M, Katz A.

Biochem Biophys Res Commun. 2018 Aug 25;502(4):450-455. doi: 10.1016/j.bbrc.2018.05.168. Epub 2018 Jun 5.

PMID:
29859934
8.

Reversible inactivation of yeast mitochondrial phenylalanyl-tRNA synthetase under oxidative stress.

Chakraborty S, Ganguli S, Chowdhury A, Ibba M, Banerjee R.

Biochim Biophys Acta Gen Subj. 2018 Aug;1862(8):1801-1809. doi: 10.1016/j.bbagen.2018.04.023. Epub 2018 May 1.

PMID:
29723545
9.

Bridging the Gap between tRNA Modifications and the Respiratory Chain.

Steiner RE, Ibba M.

Biochemistry. 2018 May 8;57(18):2565-2566. doi: 10.1021/acs.biochem.8b00377. Epub 2018 Apr 13. No abstract available.

PMID:
29652136
10.

EF-P Posttranslational Modification Has Variable Impact on Polyproline Translation in Bacillus subtilis.

Witzky A, Hummels KR, Tollerson R 2nd, Rajkovic A, Jones LA, Kearns DB, Ibba M.

MBio. 2018 Apr 3;9(2). pii: e00306-18. doi: 10.1128/mBio.00306-18.

11.

Aminoacyl-tRNA Quality Control Provides a Speedy Solution to Discriminate Right from Wrong.

Kelly P, Ibba M.

J Mol Biol. 2018 Jan 5;430(1):17-19. doi: 10.1016/j.jmb.2017.10.025. Epub 2017 Oct 27. No abstract available.

PMID:
29111345
12.

Aminoacyl-tRNA quality control is required for efficient activation of the TOR pathway regulator Gln3p.

Mohler K, Mann R, Kyle A, Reynolds N, Ibba M.

RNA Biol. 2018;15(4-5):594-603. doi: 10.1080/15476286.2017.1379635. Epub 2017 Oct 6. Review.

13.

Elongation Factor P and the Control of Translation Elongation.

Rajkovic A, Ibba M.

Annu Rev Microbiol. 2017 Sep 8;71:117-131. doi: 10.1146/annurev-micro-090816-093629. Epub 2017 May 22. Review.

PMID:
28886684
14.

Translational fidelity and mistranslation in the cellular response to stress.

Mohler K, Ibba M.

Nat Microbiol. 2017 Aug 24;2:17117. doi: 10.1038/nmicrobiol.2017.117. Review.

15.

Carbonyl reduction by YmfI in Bacillus subtilis prevents accumulation of an inhibitory EF-P modification state.

Hummels KR, Witzky A, Rajkovic A, Tollerson R 2nd, Jones LA, Ibba M, Kearns DB.

Mol Microbiol. 2017 Oct;106(2):236-251. doi: 10.1111/mmi.13760. Epub 2017 Aug 22.

16.

Elongation Factor P Interactions with the Ribosome Are Independent of Pausing.

Tollerson R 2nd, Witzky A, Ibba M.

MBio. 2017 Aug 1;8(4). pii: e01056-17. doi: 10.1128/mBio.01056-17.

17.

Testing commercial biopreservative against spoilage microorganisms in MAP packed Ricotta fresca cheese.

Spanu C, Scarano C, Piras F, Spanu V, Pala C, Casti D, Lamon S, Cossu F, Ibba M, Nieddu G, De Santis EPL.

Food Microbiol. 2017 Sep;66:72-76. doi: 10.1016/j.fm.2017.04.008. Epub 2017 Apr 17.

PMID:
28576375
18.

Synthesis of rhamnosylated arginine glycopeptides and determination of the glycosidic linkage in bacterial elongation factor P.

Wang S, Corcilius L, Sharp PP, Rajkovic A, Ibba M, Parker BL, Payne RJ.

Chem Sci. 2017 Mar 1;8(3):2296-2302. doi: 10.1039/c6sc03847f. Epub 2016 Dec 12.

19.

Evidence of intralocus recombination at the Glu-3 loci in bread wheat (Triticum aestivum L.).

Ibba MI, Kiszonas AM, Morris CF.

Theor Appl Genet. 2017 May;130(5):891-902. doi: 10.1007/s00122-017-2858-8. Epub 2017 Mar 13.

PMID:
28289804
20.

The complex evolutionary history of aminoacyl-tRNA synthetases.

Chaliotis A, Vlastaridis P, Mossialos D, Ibba M, Becker HD, Stathopoulos C, Amoutzias GD.

Nucleic Acids Res. 2017 Feb 17;45(3):1059-1068. doi: 10.1093/nar/gkw1182.

21.

Editing of misaminoacylated tRNA controls the sensitivity of amino acid stress responses in Saccharomyces cerevisiae.

Mohler K, Mann R, Bullwinkle TJ, Hopkins K, Hwang L, Reynolds NM, Gassaway B, Aerni HR, Rinehart J, Polymenis M, Faull K, Ibba M.

Nucleic Acids Res. 2017 Apr 20;45(7):3985-3996. doi: 10.1093/nar/gkx077.

22.

Quality Control by Isoleucyl-tRNA Synthetase of Bacillus subtilis Is Required for Efficient Sporulation.

Kermgard E, Yang Z, Michel AM, Simari R, Wong J, Ibba M, Lazazzera BA.

Sci Rep. 2017 Jan 31;7:41763. doi: 10.1038/srep41763.

23.

MS-READ: Quantitative measurement of amino acid incorporation.

Mohler K, Aerni HR, Gassaway B, Ling J, Ibba M, Rinehart J.

Biochim Biophys Acta Gen Subj. 2017 Nov;1861(11 Pt B):3081-3088. doi: 10.1016/j.bbagen.2017.01.025. Epub 2017 Jan 24.

24.

Shelf Life Evaluation of Ricotta Fresca Sheep Cheese in Modified Atmosphere Packaging.

Pala C, Scarano C, Venusti M, Sardo D, Casti D, Cossu F, Lamon S, Spanu V, Ibba M, Marras M, Paba A, Spanu C, De Santis EP.

Ital J Food Saf. 2016 Aug 3;5(3):5502. eCollection 2016 Jun 3.

25.

Evolution of the Microbiological Profile of Vacuum-Packed Ricotta Salata Cheese During Shelf-Life.

Casti D, Scarano C, Pala C, Cossu F, Lamon S, Spanu V, Ibba M, Mocci AM, Tedde F, Nieddu G, Spanu C, De Santis EP.

Ital J Food Saf. 2016 May 11;5(2):5501. eCollection 2016 Apr 19.

26.

Listeria Spp. and Listeria Monocytogenes Contamination in Ready-To-Eat Sandwiches Collected from Vending Machines.

Cossu F, Spanu C, Deidda S, Mura E, Casti D, Pala C, Lamon S, Spanu V, Ibba M, Marrocu E, Scarano C, Piana A, De Santis EP.

Ital J Food Saf. 2016 May 11;5(2):5500. eCollection 2016 Apr 19.

27.

Isoacceptor specific characterization of tRNA aminoacylation and misacylation in vivo.

Mohler K, Mann R, Ibba M.

Methods. 2017 Jan 15;113:127-131. doi: 10.1016/j.ymeth.2016.09.003. Epub 2016 Sep 14.

28.

Maintenance of Transcription-Translation Coupling by Elongation Factor P.

Elgamal S, Artsimovitch I, Ibba M.

MBio. 2016 Sep 13;7(5). pii: e01373-16. doi: 10.1128/mBio.01373-16.

29.

Multiple Quality Control Pathways Limit Non-protein Amino Acid Use by Yeast Cytoplasmic Phenylalanyl-tRNA Synthetase.

Moghal A, Hwang L, Faull K, Ibba M.

J Biol Chem. 2016 Jul 22;291(30):15796-805. doi: 10.1074/jbc.M116.726828. Epub 2016 May 19.

30.

Occurrence and behavior of Bacillus cereus in naturally contaminated ricotta salata cheese during refrigerated storage.

Spanu C, Scarano C, Spanu V, Pala C, Casti D, Lamon S, Cossu F, Ibba M, Nieddu G, De Santis EP.

Food Microbiol. 2016 Sep;58:135-8. doi: 10.1016/j.fm.2016.05.002. Epub 2016 May 3.

PMID:
27217369
31.

Non-canonical roles of tRNAs and tRNA mimics in bacterial cell biology.

Katz A, Elgamal S, Rajkovic A, Ibba M.

Mol Microbiol. 2016 Aug;101(4):545-58. doi: 10.1111/mmi.13419. Epub 2016 Jun 28. Review.

32.

Novel Compound Heterozygous Mutations Expand the Recognized Phenotypes of FARS2-Linked Disease.

Walker MA, Mohler KP, Hopkins KW, Oakley DH, Sweetser DA, Ibba M, Frosch MP, Thibert RL.

J Child Neurol. 2016 Aug;31(9):1127-37. doi: 10.1177/0883073816643402. Epub 2016 Apr 19.

33.

Translation Control of Swarming Proficiency in Bacillus subtilis by 5-Amino-pentanolylated Elongation Factor P.

Rajkovic A, Hummels KR, Witzky A, Erickson S, Gafken PR, Whitelegge JP, Faull KF, Kearns DB, Ibba M.

J Biol Chem. 2016 May 20;291(21):10976-85. doi: 10.1074/jbc.M115.712091. Epub 2016 Mar 21.

34.

Translation quality control is critical for bacterial responses to amino acid stress.

Bullwinkle TJ, Ibba M.

Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):2252-7. doi: 10.1073/pnas.1525206113. Epub 2016 Feb 8.

35.

126 novel mutations in Italian patients with neurofibromatosis type 1.

Bianchessi D, Morosini S, Saletti V, Ibba MC, Natacci F, Esposito S, Cesaretti C, Riva D, Finocchiaro G, Eoli M.

Mol Genet Genomic Med. 2015 Jul 7;3(6):513-25. doi: 10.1002/mgg3.161. eCollection 2015 Nov.

36.

Elongation factor-P at the crossroads of the host-endosymbiont interface.

Rajkovic A, Witzky A, Navarre W, Darwin AJ, Ibba M.

Microb Cell. 2015 Sep 23;2(10):360-362. doi: 10.15698/mic2015.10.232.

37.

Cyclic Rhamnosylated Elongation Factor P Establishes Antibiotic Resistance in Pseudomonas aeruginosa.

Rajkovic A, Erickson S, Witzky A, Branson OE, Seo J, Gafken PR, Frietas MA, Whitelegge JP, Faull KF, Navarre W, Darwin AJ, Ibba M.

MBio. 2015 Jun 9;6(3):e00823. doi: 10.1128/mBio.00823-15.

38.

Inactivation of Listeria monocytogenes using Water Bath Heat Treatment in Vacuum Packed Ricotta Salata Cheese Wedges.

Spanu C, Scarano C, Spanu V, Pala C, Di Salvo R, Piga C, Ullu A, Casti D, Lamon S, Cossu F, Ibba M, De Santis EP.

J Food Sci. 2015 Jul;80(7):M1549-56. doi: 10.1111/1750-3841.12924. Epub 2015 Jun 4.

PMID:
26044297
39.

Bacterial transfer RNAs.

Shepherd J, Ibba M.

FEMS Microbiol Rev. 2015 May;39(3):280-300. doi: 10.1093/femsre/fuv004. Epub 2015 Mar 21. Review.

40.

Transfer RNA comes of age.

Ibba M.

RNA. 2015 Apr;21(4):648-9. doi: 10.1261/rna.050179.115. No abstract available.

41.

The Bacillus subtilis tyrZ gene encodes a highly selective tyrosyl-tRNA synthetase and is regulated by a MarR regulator and T box riboswitch.

Williams-Wagner RN, Grundy FJ, Raina M, Ibba M, Henkin TM.

J Bacteriol. 2015 May;197(9):1624-31. doi: 10.1128/JB.00008-15. Epub 2015 Mar 2.

42.

Effect of hydrogen peroxide on the biosynthesis of heme and proteins: potential implications for the partitioning of Glu-tRNA(Glu) between these pathways.

Farah C, Levicán G, Ibba M, Orellana O.

Int J Mol Sci. 2014 Dec 11;15(12):23011-23. doi: 10.3390/ijms151223011.

43.

Microbiological Challenge Testing for Listeria Monocytogenes in Ready-to-Eat Food: A Practical Approach.

Spanu C, Scarano C, Ibba M, Pala C, Spanu V, De Santis EP.

Ital J Food Saf. 2014 Dec 10;3(4):4518. eCollection 2014 Dec 9. Review.

44.

The non-canonical hydroxylase structure of YfcM reveals a metal ion-coordination motif required for EF-P hydroxylation.

Kobayashi K, Katz A, Rajkovic A, Ishii R, Branson OE, Freitas MA, Ishitani R, Ibba M, Nureki O.

Nucleic Acids Res. 2014 Oct 29;42(19):12295-305. doi: 10.1093/nar/gku898. Epub 2014 Oct 1.

45.

Mistranslation of the genetic code.

Moghal A, Mohler K, Ibba M.

FEBS Lett. 2014 Nov 28;588(23):4305-10. doi: 10.1016/j.febslet.2014.08.035. Epub 2014 Sep 16. Review.

46.
47.

Quality control and infiltration of translation by amino acids outside of the genetic code.

Bullwinkle T, Lazazzera B, Ibba M.

Annu Rev Genet. 2014;48:149-66. doi: 10.1146/annurev-genet-120213-092101. Epub 2014 Aug 28. Review.

PMID:
25195507
48.

Translation initiation rate determines the impact of ribosome stalling on bacterial protein synthesis.

Hersch SJ, Elgamal S, Katz A, Ibba M, Navarre WW.

J Biol Chem. 2014 Oct 10;289(41):28160-71. doi: 10.1074/jbc.M114.593277. Epub 2014 Aug 22.

49.

EF-P dependent pauses integrate proximal and distal signals during translation.

Elgamal S, Katz A, Hersch SJ, Newsom D, White P, Navarre WW, Ibba M.

PLoS Genet. 2014 Aug 21;10(8):e1004553. doi: 10.1371/journal.pgen.1004553. eCollection 2014 Aug.

50.

tRNAs as regulators of biological processes.

Raina M, Ibba M.

Front Genet. 2014 Jun 11;5:171. doi: 10.3389/fgene.2014.00171. eCollection 2014. Review.

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