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Items: 1 to 50 of 53

1.

Case report: A retrospective serological analysis indicating human exposure to tick-borne relapsing fever spirochetes in Sonora, Mexico.

Vázquez-Guerrero E, Adan-Bante NP, Mercado-Uribe MC, Hernández-Rodríguez C, Villa-Tanaca L, Lopez JE, Ibarra JA.

PLoS Negl Trop Dis. 2019 Apr 11;13(4):e0007215. doi: 10.1371/journal.pntd.0007215. eCollection 2019 Apr. No abstract available.

2.

Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources.

Rojas-Rojas FU, Sánchez-López D, Tapia-García EY, Arroyo-Herrera I, Maymon M, Humm E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Ivanova N, Kyrpides N, Woyke T, Shapiro N, Hirsch AM, Ibarra JA, Estrada-de Los Santos P.

Curr Microbiol. 2019 May;76(5):566-574. doi: 10.1007/s00284-019-01657-0. Epub 2019 Feb 28.

PMID:
30820638
3.

Misidentification of Burkholderia pseudomallei and Other Burkholderia Species From Pediatric Infections in Mexico.

Meza-Radilla G, Mendez-Canarios A, Xicohtencatl-Cortes J, Escobedo-Guerra MR, Torres AG, Ibarra JA, Estrada-de Los Santos P.

Open Forum Infect Dis. 2019 Jan 18;6(2):ofz008. doi: 10.1093/ofid/ofz008. eCollection 2019 Feb.

4.

Inhibition of recombinant enzyme 3-hydroxy-3-methylglutaryl-CoA reductase from Candida glabrata by α-asarone-based synthetic compounds as antifungal agents.

Andrade-Pavón D, Ortiz-Álvarez J, Sánchez-Sandoval E, Tamariz J, Hernández-Rodríguez C, Ibarra JA, Villa-Tanaca L.

J Biotechnol. 2019 Feb 20;292:64-67. doi: 10.1016/j.jbiotec.2019.01.008. Epub 2019 Jan 26.

PMID:
30690093
5.

Heterologous expression and characterization of the aspartic endoprotease Pep4um from Ustilago maydis, a homolog of the human Chatepsin D, an important breast cancer therapeutic target.

Juárez-Montiel M, Tesillo-Moreno P, Cruz-Angeles A, Soberanes-Gutiérrez V, Chávez-Camarillo G, Ibarra JA, Hernández-Rodríguez C, Villa-Tanaca L.

Mol Biol Rep. 2018 Oct;45(5):1155-1163. doi: 10.1007/s11033-018-4267-8. Epub 2018 Aug 3.

PMID:
30076522
6.

Broad-spectrum antimicrobial activity by Burkholderia cenocepacia TAtl-371, a strain isolated from the tomato rhizosphere.

Rojas-Rojas FU, Salazar-Gómez A, Vargas-Díaz ME, Vásquez-Murrieta MS, Hirsch AM, De Mot R, Ghequire MGK, Ibarra JA, Estrada-de Los Santos P.

Microbiology. 2018 Sep;164(9):1072-1086. doi: 10.1099/mic.0.000675. Epub 2018 Jul 20.

PMID:
29906254
7.

[The controversial Burkholderia cepacia complex, a group of plant growth promoting species and plant, animals and human pathogens].

Rojas-Rojas FU, López-Sánchez D, Meza-Radilla G, Méndez-Canarios A, Ibarra JA, Estrada-de Los Santos P.

Rev Argent Microbiol. 2019 Jan - Mar;51(1):84-92. doi: 10.1016/j.ram.2018.01.002. Epub 2018 Apr 22. Spanish.

8.

Abundance, diversity and domain architecture variability in prokaryotic DNA-binding transcription factors.

Perez-Rueda E, Hernandez-Guerrero R, Martinez-Nuñez MA, Armenta-Medina D, Sanchez I, Ibarra JA.

PLoS One. 2018 Apr 3;13(4):e0195332. doi: 10.1371/journal.pone.0195332. eCollection 2018.

9.

Activity and expression of Candida glabrata vacuolar proteases in autophagy-like conditions.

Cortez-Sánchez JL, Cortés-Acosta E, Cueto-Hernández VM, Reyes-Maldonado E, Hernández-Rodríguez C, Villa-Tanaca L, Ibarra JA.

FEMS Yeast Res. 2018 Mar 1;18(2). doi: 10.1093/femsyr/foy006.

PMID:
29385574
10.

Polymorphism in the regulatory regions of genes CgYPS1 and CgYPS7 encoding yapsins in Candida glabrata is associated with changes in expression levels.

Cortés-Acosta E, Ibarra JA, Ramírez-Saad H, Vargas-Mendoza CF, Villa-Tanaca L, Hernández-Rodríguez C.

FEMS Yeast Res. 2017 Dec 1;17(8). doi: 10.1093/femsyr/fox077.

PMID:
29069395
11.

Nosocomial, Multidrug-Resistant Klebsiella pneumoniae Strains Isolated from Mexico City Produce Robust Biofilms on Abiotic Surfaces but Not on Human Lung Cells.

Ostria-Hernandez ML, Juárez-de la Rosa KC, Arzate-Barbosa P, Lara-Hernández A, Sakai F, Ibarra JA, Castro-Escarpulli G, Vidal JE.

Microb Drug Resist. 2018 May;24(4):422-433. doi: 10.1089/mdr.2017.0073. Epub 2017 Sep 15.

12.

The transcriptional regulator SsrB is involved in a molecular switch controlling virulence lifestyles of Salmonella.

Pérez-Morales D, Banda MM, Chau NYE, Salgado H, Martínez-Flores I, Ibarra JA, Ilyas B, Coombes BK, Bustamante VH.

PLoS Pathog. 2017 Jul 13;13(7):e1006497. doi: 10.1371/journal.ppat.1006497. eCollection 2017 Jul.

13.

The outer membrane vesicles: Secretion system type zero.

Guerrero-Mandujano A, Hernández-Cortez C, Ibarra JA, Castro-Escarpulli G.

Traffic. 2017 Jul;18(7):425-432. doi: 10.1111/tra.12488. Epub 2017 May 23. Review.

14.

Recombinant 3-Hydroxy 3-Methyl Glutaryl-CoA Reductase from Candida glabrata (Rec-CgHMGR) Obtained by Heterologous Expression, as a Novel Therapeutic Target Model for Testing Synthetic Drugs.

Andrade-Pavón D, Cuevas-Hernández RI, Trujillo-Ferrara JG, Hernández-Rodríguez C, Ibarra JA, Villa-Tanaca L.

Appl Biochem Biotechnol. 2017 Aug;182(4):1478-1490. doi: 10.1007/s12010-017-2412-9. Epub 2017 Jan 30.

PMID:
28138930
15.

National Accreditation Program for Breast Centers Demonstrates Improved Compliance with Post-Mastectomy Radiation Therapy Quality Measure.

Berger ER, Wang CE, Kaufman CS, Williamson TJ, Ibarra JA, Pollitt K, Bleicher RJ, Connolly JL, Winchester DP, Yao KA.

J Am Coll Surg. 2017 Mar;224(3):236-244. doi: 10.1016/j.jamcollsurg.2016.11.006. Epub 2016 Dec 18.

PMID:
27993697
16.

Draft Genome Sequence of Heavy Metal-Resistant Cupriavidus alkaliphilus ASC-732T, Isolated from Agave Rhizosphere in the Northeast of Mexico.

Rojas-Rojas FU, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Shapiro N, Ibarra JA, Estrada-de Los Santos P.

Genome Announc. 2016 Sep 22;4(5). pii: e01013-16. doi: 10.1128/genomeA.01013-16.

17.

Distribution of putative xenogeneic silencers in prokaryote genomes.

Perez-Rueda E, Ibarra JA.

Comput Biol Chem. 2015 Oct;58:167-72. doi: 10.1016/j.compbiolchem.2015.06.007. Epub 2015 Jul 23.

PMID:
26247404
18.

Survey of clustered regularly interspaced short palindromic repeats and their associated Cas proteins (CRISPR/Cas) systems in multiple sequenced strains of Klebsiella pneumoniae.

Ostria-Hernández ML, Sánchez-Vallejo CJ, Ibarra JA, Castro-Escarpulli G.

BMC Res Notes. 2015 Aug 4;8:332. doi: 10.1186/s13104-015-1285-7.

19.

[Hypersensitivity to mosquito bite manifested as Skeeter síndrome].

Pérez-Vanzzini R, González-Díaz SN, Arias-Cruz A, Palma-Gómez S, Yong-Rodríguez A, Gutiérrez-Mujica JJ, García-Calderín D, Ibarra JA.

Rev Alerg Mex. 2015 Jan-Mar;62(1):83-7. Spanish.

PMID:
25758116
20.

D-Amino acids inhibit biofilm formation in Staphylococcus epidermidis strains from ocular infections.

Ramón-Peréz ML, Diaz-Cedillo F, Ibarra JA, Torales-Cardeña A, Rodríguez-Martínez S, Jan-Roblero J, Cancino-Diaz ME, Cancino-Diaz JC.

J Med Microbiol. 2014 Oct;63(Pt 10):1369-76. doi: 10.1099/jmm.0.075796-0. Epub 2014 Jul 7.

PMID:
25001104
21.

The δ subunit of RNA polymerase guides promoter selectivity and virulence in Staphylococcus aureus.

Weiss A, Ibarra JA, Paoletti J, Carroll RK, Shaw LN.

Infect Immun. 2014 Apr;82(4):1424-35. doi: 10.1128/IAI.01508-14. Epub 2014 Feb 3.

22.

Molecular cloning and heterologous expression in Pichia pastoris of X-prolyl-dipeptidyl aminopeptidase from basidiomycete Ustilago maydis.

Juárez-Montiel M, Ibarra JA, Chávez-Camarillo G, Hernández-Rodríguez C, Villa-Tanaca L.

Appl Biochem Biotechnol. 2014 Mar;172(5):2530-9. doi: 10.1007/s12010-013-0682-4. Epub 2014 Jan 10.

PMID:
24402567
23.

The 3-hydroxy-3-methylglutaryl coenzyme-A reductases from fungi: a proposal as a therapeutic target and as a study model.

Andrade-Pavón D, Sánchez-Sandoval E, Rosales-Acosta B, Ibarra JA, Tamariz J, Hernández-Rodríguez C, Villa-Tanaca L.

Rev Iberoam Micol. 2014 Jan-Mar;31(1):81-5. doi: 10.1016/j.riam.2013.10.004. Epub 2013 Nov 20. Review.

PMID:
24270073
24.

Further characterization of functional domains of PerA, role of amino and carboxy terminal domains in DNA binding.

Ibarra JA, García-Zacarias CM, Lara-Ochoa C, Carabarin-Lima A, Tecpanecatl-Xihuitl JS, Perez-Rueda E, Martínez-Laguna Y, Puente JL.

PLoS One. 2013;8(2):e56977. doi: 10.1371/journal.pone.0056977. Epub 2013 Feb 25.

25.

Global analysis of transcriptional regulators in Staphylococcus aureus.

Ibarra JA, Pérez-Rueda E, Carroll RK, Shaw LN.

BMC Genomics. 2013 Feb 26;14:126. doi: 10.1186/1471-2164-14-126.

26.

Bacterial colonization of host cells in the absence of cholesterol.

Gilk SD, Cockrell DC, Luterbach C, Hansen B, Knodler LA, Ibarra JA, Steele-Mortimer O, Heinzen RA.

PLoS Pathog. 2013 Jan;9(1):e1003107. doi: 10.1371/journal.ppat.1003107. Epub 2013 Jan 24.

27.

Large-format histology in diagnosing breast carcinoma.

Tot T, Eusebi V, Ibarra JA.

Int J Breast Cancer. 2012;2012:618796. doi: 10.1155/2012/618796. Epub 2012 Dec 27. No abstract available.

28.

Extracellular proteases are key mediators of Staphylococcus aureus virulence via the global modulation of virulence-determinant stability.

Kolar SL, Ibarra JA, Rivera FE, Mootz JM, Davenport JE, Stevens SM, Horswill AR, Shaw LN.

Microbiologyopen. 2013 Feb;2(1):18-34. doi: 10.1002/mbo3.55. Epub 2012 Dec 11.

30.

Coiled-coil domains enhance the membrane association of Salmonella type III effectors.

Knodler LA, Ibarra JA, Pérez-Rueda E, Yip CK, Steele-Mortimer O.

Cell Microbiol. 2011 Oct;13(10):1497-517. doi: 10.1111/j.1462-5822.2011.01635.x. Epub 2011 Jul 11.

31.

Fixation time and HER2/neu assessment.

Bohn OL, Sanchez-Sosa S, Ibarra JA, Rogers LW.

Am J Clin Pathol. 2011 Jun;135(6):979-80; author reply 980. doi: 10.1309/AJCPVRQS9UQTCZE5. No abstract available.

PMID:
21571969
32.

Fixation time does not affect expression of HER2/neu: a pilot study.

Ibarra JA, Rogers LW.

Am J Clin Pathol. 2010 Oct;134(4):594-6. doi: 10.1309/AJCPAIJPSN4A9MJI.

PMID:
20855640
33.

Fixation time does not affect the expression of estrogen receptor.

Ibarra JA, Rogers LW, Kyshtoobayeva A, Bloom K.

Am J Clin Pathol. 2010 May;133(5):747-55. doi: 10.1309/AJCPPIUHS4GVAR0I.

PMID:
20395521
34.

Induction of Salmonella pathogenicity island 1 under different growth conditions can affect Salmonella-host cell interactions in vitro.

Ibarra JA, Knodler LA, Sturdevant DE, Virtaneva K, Carmody AB, Fischer ER, Porcella SF, Steele-Mortimer O.

Microbiology. 2010 Apr;156(Pt 4):1120-33. doi: 10.1099/mic.0.032896-0. Epub 2009 Dec 24.

35.

Salmonella--the ultimate insider. Salmonella virulence factors that modulate intracellular survival.

Ibarra JA, Steele-Mortimer O.

Cell Microbiol. 2009 Nov;11(11):1579-86. doi: 10.1111/j.1462-5822.2009.01368.x. Epub 2009 Sep 23. Review.

36.

Examination of specimens from patients with ductal carcinoma in situ of the breast using large-format histology sections.

Tot T, Ibarra JA.

Arch Pathol Lab Med. 2009 Sep;133(9):1361; author reply 1361-2. doi: 10.1043/1543-2165-133.9.1361.b. No abstract available.

PMID:
19722732
37.
38.

Breast pathology guideline implementation in low- and middle-income countries.

Masood S, Vass L, Ibarra JA Jr, Ljung BM, Stalsberg H, Eniu A, Carlson RW, Anderson BO; Breast Health Global Initiative Pathology Focus Group.

Cancer. 2008 Oct 15;113(8 Suppl):2297-304. doi: 10.1002/cncr.23833.

39.

Guideline implementation for breast healthcare in low- and middle-income countries: diagnosis resource allocation.

Shyyan R, Sener SF, Anderson BO, Garrote LM, Hortobágyi GN, Ibarra JA Jr, Ljung BM, Sancho-Garnier H, Stalsberg H; Breast Health Global Initiative Diagnosis Panel.

Cancer. 2008 Oct 15;113(8 Suppl):2257-68. doi: 10.1002/cncr.23840.

40.

Nodal stage classification for breast carcinoma: improving interobserver reproducibility through standardized histologic criteria and image-based training.

Turner RR, Weaver DL, Cserni G, Lester SC, Hirsch K, Elashoff DA, Fitzgibbons PL, Viale G, Mazzarol G, Ibarra JA, Schnitt SJ, Giuliano AE.

J Clin Oncol. 2008 Jan 10;26(2):258-63. doi: 10.1200/JCO.2007.13.0179.

PMID:
18182666
41.

The DNA-binding domain as a functional indicator: the case of the AraC/XylS family of transcription factors.

Ibarra JA, Pérez-Rueda E, Segovia L, Puente JL.

Genetica. 2008 May;133(1):65-76. Epub 2007 Aug 22.

PMID:
17712603
42.

Papillary lesions of the breast.

Ibarra JA.

Breast J. 2006 May-Jun;12(3):237-51. Review.

PMID:
16684322
43.

Discrimination of breast cancer by anti-malignin antibody serum test in women undergoing biopsy.

Harman SM, Gucciardo F, Heward CB, Granstrom P, Barclay-White B, Rogers LW, Ibarra JA Jr.

Cancer Epidemiol Biomarkers Prev. 2005 Oct;14(10):2310-5.

44.

Transcriptional inhibitor of virulence factors in enteropathogenic Escherichia coli.

Gauthier A, Robertson ML, Lowden M, Ibarra JA, Puente JL, Finlay BB.

Antimicrob Agents Chemother. 2005 Oct;49(10):4101-9.

45.

Dissecting virulence: systematic and functional analyses of a pathogenicity island.

Deng W, Puente JL, Gruenheid S, Li Y, Vallance BA, Vázquez A, Barba J, Ibarra JA, O'Donnell P, Metalnikov P, Ashman K, Lee S, Goode D, Pawson T, Finlay BB.

Proc Natl Acad Sci U S A. 2004 Mar 9;101(10):3597-602. Epub 2004 Feb 26.

46.

Diagnosis of breast cancer in countries with limited resources.

Vargas HI, Anderson BO, Chopra R, Lehman CD, Ibarra JA, Masood S, Vass L; Global Summit Diagnosis Panel.

Breast J. 2003 May-Jun;9 Suppl 2:S60-6.

PMID:
12713498
48.

The pathologist in breast cancer: contemporary issues in the interdisciplinary approach.

Ibarra JA.

Surg Oncol Clin N Am. 2000 Apr;9(2):295-317. Review.

PMID:
10757846
49.

Unilateral axillary adenopathy secondary to a silicone wrist implant: report of a case detected at screening mammography.

Roux SP, Bertucci GM, Ibarra JA, Blatt G, Ashworth CR.

Radiology. 1996 Feb;198(2):345-6.

PMID:
8596829
50.

Initial brachytherapy in the breast conservation approach to breast cancer.

Formenti SC, Lucas G, Ibarra JA, Langholz B, Syed NM, Puthawala AA, Neblett D, Gowdy RA, Petrovich Z.

Am J Clin Oncol. 1995 Aug;18(4):331-6.

PMID:
7625375

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