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Items: 1 to 50 of 149

1.

Bacterial Contamination of Hemodialysis Devices in Hospital Dialysis Wards.

Shimohata T, Mawatari K, Uebanso T, Honjo A, Tsunedomi A, Hatayama S, Sato Y, Kido J, Nishisaka R, Yoshimoto A, Yamashita T, Amano S, Maetani-Yasui M, Iba H, Harada Y, Nakahashi M, Yasui-Yamada S, Hamada Y, Nakagawa T, Sogabe M, Emoto T, Akutagawa M, Okahisa T, Kinouchi Y, Takahashi A.

J Med Invest. 2019;66(1.2):148-152. doi: 10.2152/jmi.66.148.

2.

Author Correction: The role of the SWI/SNF chromatin remodeling complex in maintaining the stemness of glioma initiating cells.

Hiramatsu H, Kobayashi K, Kobayashi K, Haraguchi T, Ino Y, Todo T, Iba H.

Sci Rep. 2018 Oct 25;8(1):16079. doi: 10.1038/s41598-018-31444-z.

3.

Tokishakuyakusan ameliorates spatial memory deficits induced by ovariectomy combined with β-amyloid in rats.

Egashira N, Akiyoshi Y, Iba H, Arai T, Hatip-Al-Khatib I, Mishima K, Iwasaki K.

J Pharmacol Sci. 2018 Mar;136(3):149-154. doi: 10.1016/j.jphs.2018.01.005. Epub 2018 Feb 8.

4.

Tumor suppression via inhibition of SWI/SNF complex-dependent NF-κB activation.

Kobayashi K, Hiramatsu H, Nakamura S, Kobayashi K, Haraguchi T, Iba H.

Sci Rep. 2017 Sep 18;7(1):11772. doi: 10.1038/s41598-017-11806-9.

5.

MiR-199a Inhibits Secondary Envelopment of Herpes Simplex Virus-1 Through the Downregulation of Cdc42-specific GTPase Activating Protein Localized in Golgi Apparatus.

Kobayashi K, Suemasa F, Sagara H, Nakamura S, Ino Y, Kobayashi K, Hiramatsu H, Haraguchi T, Kurokawa K, Todo T, Nakano A, Iba H.

Sci Rep. 2017 Jul 27;7(1):6650. doi: 10.1038/s41598-017-06754-3.

6.

The role of the SWI/SNF chromatin remodeling complex in maintaining the stemness of glioma initiating cells.

Hiramatsu H, Kobayashi K, Kobayashi K, Haraguchi T, Ino Y, Todo T, Iba H.

Sci Rep. 2017 Apr 18;7(1):889. doi: 10.1038/s41598-017-00982-3. Erratum in: Sci Rep. 2018 Oct 25;8(1):16079.

7.

Pulse Detecting Genetic Circuit - A New Design Approach.

Noman N, Inniss M, Iba H, Way JC.

PLoS One. 2016 Dec 1;11(12):e0167162. doi: 10.1371/journal.pone.0167162. eCollection 2016.

8.

Kamishoyosan reduces conditioned fear-induced freezing behavior in socially isolated ovariectomized rats.

Egashira N, Iba H, Kuwano H, Kawanaka R, Nagao M, Moriyama H, Watanabe T, Kubota K, Katsurabayashi S, Iwasaki K.

J Pharmacol Sci. 2016 Aug;131(4):279-83. doi: 10.1016/j.jphs.2016.07.007. Epub 2016 Jul 30.

9.

A highly efficient Li2O2 oxidation system in Li-O2 batteries.

Hase Y, Seki J, Shiga T, Mizuno F, Nishikoori H, Iba H, Takechi K.

Chem Commun (Camb). 2016 Oct 6;52(82):12151-12154.

PMID:
27549372
10.

Dynamics and plasticity of the epithelial to mesenchymal transition induced by miR-200 family inhibition.

Haraguchi T, Kondo M, Uchikawa R, Kobayashi K, Hiramatsu H, Kobayashi K, Chit UW, Shimizu T, Iba H.

Sci Rep. 2016 Feb 18;6:21117. doi: 10.1038/srep21117.

11.

Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IκBζ.

Kayama H, Ramirez-Carrozzi VR, Yamamoto M, Mizutani T, Kuwata H, Iba H, Matsumoto M, Honda K, Smale ST, Takeda K.

J Biol Chem. 2015 Sep 11;290(37):22446. doi: 10.1074/jbc.A115.709965. No abstract available.

12.

Hybrid Repair of Proximal Subclavian Artery Aneurysm.

Morimoto K, Matsuda H, Fukuda T, Iba H, Tanaka H, Sasaki H, Minatoya K, Kobayashi J.

Ann Vasc Dis. 2015;8(2):87-92. doi: 10.3400/avd.oa.15-00006. Epub 2015 May 26.

13.

Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IκBζ.

Kayama H, Ramirez-Carrozzi VR, Yamamoto M, Mizutani T, Kuwata H, Iba H, Matsumoto M, Honda K, Smale ST, Takeda K.

J Biol Chem. 2015 Feb 20;290(8):4815. doi: 10.1074/jbc.A114.709965. No abstract available.

14.

The miR-199a/Brm/EGR1 axis is a determinant of anchorage-independent growth in epithelial tumor cell lines.

Kobayashi K, Sakurai K, Hiramatsu H, Inada K, Shiogama K, Nakamura S, Suemasa F, Kobayashi K, Imoto S, Haraguchi T, Ito H, Ishizaka A, Tsutsumi Y, Iba H.

Sci Rep. 2015 Feb 12;5:8428. doi: 10.1038/srep08428.

15.

Evolving robust gene regulatory networks.

Noman N, Monjo T, Moscato P, Iba H.

PLoS One. 2015 Jan 23;10(1):e0116258. doi: 10.1371/journal.pone.0116258. eCollection 2015.

16.

Campylobacter jejuni infection suppressed Cl⁻ secretion induced by CFTR activation in T-84 cells.

Negoro S, Shimohata T, Hatayama S, Sato Y, Matsumoto M, Iba H, Aihara M, Uebanso T, Hamada Y, Nishikawa Y, Yamasaki S, Mawatari K, Takahashi A.

J Infect Chemother. 2014 Nov;20(11):682-8. doi: 10.1016/j.jiac.2014.07.007. Epub 2014 Aug 6.

PMID:
25107576
17.

7SK small nuclear ribonucleoprotein complex is recruited to the HIV-1 promoter via short viral transcripts.

Mizutani T, Ishizaka A, Suzuki Y, Iba H.

FEBS Lett. 2014 May 2;588(9):1630-6. doi: 10.1016/j.febslet.2014.01.067. Epub 2014 Mar 6.

18.

Docosahexaenoic acid reverses angiotensin II-induced RECK suppression and cardiac fibroblast migration.

Siddesha JM, Valente AJ, Yoshida T, Sakamuri SS, Delafontaine P, Iba H, Noda M, Chandrasekar B.

Cell Signal. 2014 May;26(5):933-41. doi: 10.1016/j.cellsig.2014.01.005. Epub 2014 Jan 19.

19.

Quantitation of Li2O2 stored in Li-O2 batteries based on its reaction with an oxoammonium salt.

Hase Y, Ito E, Shiga T, Mizuno F, Nishikoori H, Iba H, Takechi K.

Chem Commun (Camb). 2013 Sep 28;49(75):8389-91. doi: 10.1039/c3cc44723e.

PMID:
23939341
20.

Extracellular ATP mediates mast cell-dependent intestinal inflammation through P2X7 purinoceptors.

Kurashima Y, Amiya T, Nochi T, Fujisawa K, Haraguchi T, Iba H, Tsutsui H, Sato S, Nakajima S, Iijima H, Kubo M, Kunisawa J, Kiyono H.

Nat Commun. 2012;3:1034. doi: 10.1038/ncomms2023.

21.

Multiple microRNAs induced by Cdx1 suppress Cdx2 in human colorectal tumour cells.

Tagawa T, Haraguchi T, Hiramatsu H, Kobayashi K, Sakurai K, Inada K, Iba H.

Biochem J. 2012 Nov 1;447(3):449-55. doi: 10.1042/BJ20120434.

PMID:
22849325
22.

VopB1 and VopD1 are essential for translocation of type III secretion system 1 effectors of Vibrio parahaemolyticus.

Shimohata T, Mawatari K, Iba H, Hamano M, Negoro S, Asada S, Aihara M, Hirata A, Su Z, Takahashi A.

Can J Microbiol. 2012 Aug;58(8):1002-7. doi: 10.1139/w2012-081. Epub 2012 Jul 24.

PMID:
22827847
23.

VP2118 has major roles in Vibrio parahaemolyticus response to oxidative stress.

Le TT, Mawatari K, Maetani M, Yamamoto T, Hayashida S, Iba H, Aihara M, Hirata A, Shimohata T, Uebanso T, Takahashi A.

Biochim Biophys Acta. 2012 Oct;1820(10):1686-92. doi: 10.1016/j.bbagen.2012.06.019. Epub 2012 Jul 4.

PMID:
22771831
24.

Double plant homeodomain (PHD) finger proteins DPF3a and -3b are required as transcriptional co-activators in SWI/SNF complex-dependent activation of NF-κB RelA/p50 heterodimer.

Ishizaka A, Mizutani T, Kobayashi K, Tando T, Sakurai K, Fujiwara T, Iba H.

J Biol Chem. 2012 Apr 6;287(15):11924-33. doi: 10.1074/jbc.M111.322792. Epub 2012 Feb 13.

25.

A potent 2'-O-methylated RNA-based microRNA inhibitor with unique secondary structures.

Haraguchi T, Nakano H, Tagawa T, Ohki T, Ueno Y, Yoshida T, Iba H.

Nucleic Acids Res. 2012 Apr;40(8):e58. doi: 10.1093/nar/gkr1317. Epub 2012 Jan 17.

26.

MicroRNA regulation of glycoprotein B5R in oncolytic vaccinia virus reduces viral pathogenicity without impairing its antitumor efficacy.

Hikichi M, Kidokoro M, Haraguchi T, Iba H, Shida H, Tahara H, Nakamura T.

Mol Ther. 2011 Jun;19(6):1107-15. doi: 10.1038/mt.2011.36. Epub 2011 Mar 8.

27.

MicroRNAs miR-199a-5p and -3p target the Brm subunit of SWI/SNF to generate a double-negative feedback loop in a variety of human cancers.

Sakurai K, Furukawa C, Haraguchi T, Inada K, Shiogama K, Tagawa T, Fujita S, Ueno Y, Ogata A, Ito M, Tsutsumi Y, Iba H.

Cancer Res. 2011 Mar 1;71(5):1680-9. doi: 10.1158/0008-5472.CAN-10-2345. Epub 2010 Dec 28.

28.

Vibrio parahaemolyticus infection induces modulation of IL-8 secretion through dual pathway via VP1680 in Caco-2 cells.

Shimohata T, Nakano M, Lian X, Shigeyama T, Iba H, Hamamoto A, Yoshida M, Harada N, Yamamoto H, Yamato M, Mawatari K, Tamaki T, Nakaya Y, Takahashi A.

J Infect Dis. 2011 Feb 15;203(4):537-44. doi: 10.1093/infdis/jiq070. Epub 2010 Dec 21.

29.

Incorporation of biaryl units into the 5' and 3' ends of sense and antisense strands of siRNA duplexes improves strand selectivity and nuclease resistance.

Yoshikawa K, Ogata A, Matsuda C, Kohara M, Iba H, Kitade Y, Ueno Y.

Bioconjug Chem. 2011 Jan 19;22(1):42-9. doi: 10.1021/bc100301w. Epub 2010 Dec 9.

PMID:
21141919
30.

Biaryl modification of the 5'-terminus of one strand of a microRNA duplex induces strand specificity.

Ogata A, Furukawa C, Sakurai K, Iba H, Kitade Y, Ueno Y.

Bioorg Med Chem Lett. 2010 Dec 15;20(24):7299-302. doi: 10.1016/j.bmcl.2010.10.077. Epub 2010 Nov 8.

PMID:
21067927
31.

Requiem protein links RelB/p52 and the Brm-type SWI/SNF complex in a noncanonical NF-kappaB pathway.

Tando T, Ishizaka A, Watanabe H, Ito T, Iida S, Haraguchi T, Mizutani T, Izumi T, Isobe T, Akiyama T, Inoue J, Iba H.

J Biol Chem. 2010 Jul 16;285(29):21951-60. doi: 10.1074/jbc.M109.087783. Epub 2010 May 11.

32.

Reverse engineering gene regulatory network from microarray data using linear time-variant model.

Kabir M, Noman N, Iba H.

BMC Bioinformatics. 2010 Jan 18;11 Suppl 1:S56. doi: 10.1186/1471-2105-11-S1-S56.

33.

Loss of the Brm-type SWI/SNF chromatin remodeling complex is a strong barrier to the Tat-independent transcriptional elongation of human immunodeficiency virus type 1 transcripts.

Mizutani T, Ishizaka A, Tomizawa M, Okazaki T, Yamamichi N, Kawana-Tachikawa A, Iwamoto A, Iba H.

J Virol. 2009 Nov;83(22):11569-80. doi: 10.1128/JVI.00742-09. Epub 2009 Sep 2.

34.

Locked nucleic acid in situ hybridization analysis of miR-21 expression during colorectal cancer development.

Yamamichi N, Shimomura R, Inada K, Sakurai K, Haraguchi T, Ozaki Y, Fujita S, Mizutani T, Furukawa C, Fujishiro M, Ichinose M, Shiogama K, Tsutsumi Y, Omata M, Iba H.

Clin Cancer Res. 2009 Jun 15;15(12):4009-16. doi: 10.1158/1078-0432.CCR-08-3257. Epub 2009 Jun 9.

35.

Prediction of cancer class with majority voting genetic programming classifier using gene expression data.

Paul TK, Iba H.

IEEE/ACM Trans Comput Biol Bioinform. 2009 Apr-Jun;6(2):353-67. doi: 10.1109/TCBB.2007.70245.

PMID:
19407358
36.

Cdx2 and the Brm-type SWI/SNF complex cooperatively regulate villin expression in gastrointestinal cells.

Yamamichi N, Inada K, Furukawa C, Sakurai K, Tando T, Ishizaka A, Haraguchi T, Mizutani T, Fujishiro M, Shimomura R, Oka M, Ichinose M, Tsutsumi Y, Omata M, Iba H.

Exp Cell Res. 2009 Jun 10;315(10):1779-89. doi: 10.1016/j.yexcr.2009.01.006. Epub 2009 Jan 22.

PMID:
19371634
37.

Role of glucocorticoid receptor in the regulation of cellular sensitivity to irinotecan hydrochloride.

Akagi T, Fukagawa T, Kage Y, To H, Matsunaga N, Koyanagi S, Uchida A, Fujii A, Iba H, Ikemura T, Aramaki H, Higuchi S, Ohdo S.

J Pharmacol Sci. 2009 Feb;109(2):265-74.

38.

Vectors expressing efficient RNA decoys achieve the long-term suppression of specific microRNA activity in mammalian cells.

Haraguchi T, Ozaki Y, Iba H.

Nucleic Acids Res. 2009 Apr;37(6):e43. doi: 10.1093/nar/gkp040. Epub 2009 Feb 17.

39.

[Gene regulatory network involving miRNA].

Fujita S, Iba H.

Tanpakushitsu Kakusan Koso. 2008 Oct;53(13):1781-6. Review. Japanese. No abstract available.

PMID:
19044292
40.

miR-21 Gene expression triggered by AP-1 is sustained through a double-negative feedback mechanism.

Fujita S, Ito T, Mizutani T, Minoguchi S, Yamamichi N, Sakurai K, Iba H.

J Mol Biol. 2008 May 2;378(3):492-504. doi: 10.1016/j.jmb.2008.03.015. Epub 2008 Mar 15.

PMID:
18384814
41.

Instability of retroviral DNA methylation in embryonic stem cells.

Minoguchi S, Iba H.

Stem Cells. 2008 May;26(5):1166-73. doi: 10.1634/stemcells.2007-1106. Epub 2008 Mar 6.

42.

Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IkappaBzeta.

Kayama H, Ramirez-Carrozzi VR, Yamamoto M, Mizutani T, Kuwata H, Iba H, Matsumoto M, Honda K, Smale ST, Takeda K.

J Biol Chem. 2008 May 2;283(18):12468-77. doi: 10.1074/jbc.M709965200. Epub 2008 Mar 3. Erratum in: J Biol Chem. 2015 Feb 20;290(8):4815. J Biol Chem. 2015 Sep 11;290(37):22446.

43.

Learning polynomial feedforward neural networks by genetic programming and backpropagation.

Nikolaev NY, Iba H.

IEEE Trans Neural Netw. 2003;14(2):337-50. doi: 10.1109/TNN.2003.809405.

PMID:
18238017
44.

Putative promoter regions of miRNA genes involved in evolutionarily conserved regulatory systems among vertebrates.

Fujita S, Iba H.

Bioinformatics. 2008 Feb 1;24(3):303-8. Epub 2007 Nov 30.

PMID:
18055479
45.

Brm transactivates the telomerase reverse transcriptase (TERT) gene and modulates the splicing patterns of its transcripts in concert with p54(nrb).

Ito T, Watanabe H, Yamamichi N, Kondo S, Tando T, Haraguchi T, Mizutani T, Sakurai K, Fujita S, Izumi T, Isobe T, Iba H.

Biochem J. 2008 Apr 1;411(1):201-9.

PMID:
18042045
46.

Frequent loss of Brm expression in gastric cancer correlates with histologic features and differentiation state.

Yamamichi N, Inada K, Ichinose M, Yamamichi-Nishina M, Mizutani T, Watanabe H, Shiogama K, Fujishiro M, Okazaki T, Yahagi N, Haraguchi T, Fujita S, Tsutsumi Y, Omata M, Iba H.

Cancer Res. 2007 Nov 15;67(22):10727-35.

47.

Inferring gene regulatory networks using differential evolution with local search heuristics.

Noman N, Iba H.

IEEE/ACM Trans Comput Biol Bioinform. 2007 Oct-Dec;4(4):634-47.

PMID:
17975274
48.

SiRNAs do not induce RNA-dependent transcriptional silencing of retrovirus in human cells.

Haraguchi T, Mizutani T, Yamamichi N, Ito T, Minoguchi S, Iba H.

FEBS Lett. 2007 Oct 16;581(25):4949-54. Epub 2007 Sep 24.

49.

MetaClustering: discovery of the different sample clusterings in gene expression data.

Venet D, Bersini H, Iba H.

Genome Inform. 2006;17(2):172-83.

PMID:
17503390
50.

Reverse engineering genetic networks using evolutionary computation.

Noman N, Iba H.

Genome Inform. 2005;16(2):205-14.

PMID:
16901103

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