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Items: 40

1.

Exploring the rumen fluid metabolome using liquid chromatography-high-resolution mass spectrometry and Molecular Networking.

de Almeida RTR, do Prado RM, Porto C, Dos Santos GT, Huws SA, Pilau EJ.

Sci Rep. 2018 Dec 19;8(1):17971. doi: 10.1038/s41598-018-36196-4.

2.

Addressing Global Ruminant Agricultural Challenges Through Understanding the Rumen Microbiome: Past, Present, and Future.

Huws SA, Creevey CJ, Oyama LB, Mizrahi I, Denman SE, Popova M, Muñoz-Tamayo R, Forano E, Waters SM, Hess M, Tapio I, Smidt H, Krizsan SJ, Yáñez-Ruiz DR, Belanche A, Guan L, Gruninger RJ, McAllister TA, Newbold CJ, Roehe R, Dewhurst RJ, Snelling TJ, Watson M, Suen G, Hart EH, Kingston-Smith AH, Scollan ND, do Prado RM, Pilau EJ, Mantovani HC, Attwood GT, Edwards JE, McEwan NR, Morrisson S, Mayorga OL, Elliott C, Morgavi DP.

Front Microbiol. 2018 Sep 25;9:2161. doi: 10.3389/fmicb.2018.02161. eCollection 2018. Review.

3.

Using 'Omic Approaches to Compare Temporal Bacterial Colonization of Lolium perenne, Lotus corniculatus, and Trifolium pratense in the Rumen.

Elliott CL, Edwards JE, Wilkinson TJ, Allison GG, McCaffrey K, Scott MB, Rees-Stevens P, Kingston-Smith AH, Huws SA.

Front Microbiol. 2018 Sep 19;9:2184. doi: 10.3389/fmicb.2018.02184. eCollection 2018.

4.

Lung cancer: a new frontier for microbiome research and clinical translation.

Mur LA, Huws SA, Cameron SJ, Lewis PD, Lewis KE.

Ecancermedicalscience. 2018 Sep 5;12:866. doi: 10.3332/ecancer.2018.866. eCollection 2018. Review.

5.

CowPI: A Rumen Microbiome Focussed Version of the PICRUSt Functional Inference Software.

Wilkinson TJ, Huws SA, Edwards JE, Kingston-Smith AH, Siu-Ting K, Hughes M, Rubino F, Friedersdorff M, Creevey CJ.

Front Microbiol. 2018 May 25;9:1095. doi: 10.3389/fmicb.2018.01095. eCollection 2018.

6.

The rumen microbiome: an underexplored resource for novel antimicrobial discovery.

Oyama LB, Girdwood SE, Cookson AR, Fernandez-Fuentes N, Privé F, Vallin HE, Wilkinson TJ, Golyshin PN, Golyshina OV, Mikut R, Hilpert K, Richards J, Wootton M, Edwards JE, Maresca M, Perrier J, Lundy FT, Luo Y, Zhou M, Hess M, Mantovani HC, Creevey CJ, Huws SA.

NPJ Biofilms Microbiomes. 2017 Dec 1;3:33. doi: 10.1038/s41522-017-0042-1. eCollection 2017.

7.

Can we improve the nutritional quality of meat?

Scollan ND, Price EM, Morgan SA, Huws SA, Shingfield KJ.

Proc Nutr Soc. 2017 Nov;76(4):603-618. doi: 10.1017/S0029665117001112. Epub 2017 Sep 25. Review.

PMID:
28942754
8.

Buwchitin: A Ruminal Peptide with Antimicrobial Potential against Enterococcus faecalis.

Oyama LB, Crochet JA, Edwards JE, Girdwood SE, Cookson AR, Fernandez-Fuentes N, Hilpert K, Golyshin PN, Golyshina OV, Privé F, Hess M, Mantovani HC, Creevey CJ, Huws SA.

Front Chem. 2017 Jul 12;5:51. doi: 10.3389/fchem.2017.00051. eCollection 2017.

9.

Characterization of the Microbiome along the Gastrointestinal Tract of Growing Turkeys.

Wilkinson TJ, Cowan AA, Vallin HE, Onime LA, Oyama LB, Cameron SJ, Gonot C, Moorby JM, Waddams K, Theobald VJ, Leemans D, Bowra S, Nixey C, Huws SA.

Front Microbiol. 2017 Jun 22;8:1089. doi: 10.3389/fmicb.2017.01089. eCollection 2017.

10.

A pilot study using metagenomic sequencing of the sputum microbiome suggests potential bacterial biomarkers for lung cancer.

Cameron SJS, Lewis KE, Huws SA, Hegarty MJ, Lewis PD, Pachebat JA, Mur LAJ.

PLoS One. 2017 May 25;12(5):e0177062. doi: 10.1371/journal.pone.0177062. eCollection 2017.

11.

Temporal Metagenomic and Metabolomic Characterization of Fresh Perennial Ryegrass Degradation by Rumen Bacteria.

Mayorga OL, Kingston-Smith AH, Kim EJ, Allison GG, Wilkinson TJ, Hegarty MJ, Theodorou MK, Newbold CJ, Huws SA.

Front Microbiol. 2016 Nov 18;7:1854. eCollection 2016.

12.

Metagenomic Sequencing of the Chronic Obstructive Pulmonary Disease Upper Bronchial Tract Microbiome Reveals Functional Changes Associated with Disease Severity.

Cameron SJ, Lewis KE, Huws SA, Lin W, Hegarty MJ, Lewis PD, Mur LA, Pachebat JA.

PLoS One. 2016 Feb 12;11(2):e0149095. doi: 10.1371/journal.pone.0149095. eCollection 2016.

13.

Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass.

Huws SA, Edwards JE, Creevey CJ, Rees Stevens P, Lin W, Girdwood SE, Pachebat JA, Kingston-Smith AH.

FEMS Microbiol Ecol. 2016 Jan;92(1). pii: fiv137. doi: 10.1093/femsec/fiv137. Epub 2015 Nov 4.

PMID:
26542074
14.

The human salivary microbiome exhibits temporal stability in bacterial diversity.

Cameron SJ, Huws SA, Hegarty MJ, Smith DP, Mur LA.

FEMS Microbiol Ecol. 2015 Sep;91(9):fiv091. doi: 10.1093/femsec/fiv091. Epub 2015 Jul 22.

15.

Isolation and characterization of novel lipases/esterases from a bovine rumen metagenome.

Privé F, Newbold CJ, Kaderbhai NN, Girdwood SG, Golyshina OV, Golyshin PN, Scollan ND, Huws SA.

Appl Microbiol Biotechnol. 2015 Jul;99(13):5475-85. doi: 10.1007/s00253-014-6355-6. Epub 2015 Jan 11.

16.

Metaphylogenomic and potential functionality of the limpet Patella pellucida's gastrointestinal tract microbiome.

Dudek M, Adams J, Swain M, Hegarty M, Huws S, Gallagher J.

Int J Mol Sci. 2014 Oct 20;15(10):18819-39. doi: 10.3390/ijms151018819.

17.

Characterization of the rumen lipidome and microbiome of steers fed a diet supplemented with flax and echium oil.

Huws SA, Kim EJ, Cameron SJ, Girdwood SE, Davies L, Tweed J, Vallin H, Scollan ND.

Microb Biotechnol. 2015 Mar;8(2):331-41. doi: 10.1111/1751-7915.12164. Epub 2014 Sep 16.

18.

Ruminal Prevotella spp. may play an important role in the conversion of plant lignans into human health beneficial antioxidants.

Schogor AL, Huws SA, Santos GT, Scollan ND, Hauck BD, Winters AL, Kim EJ, Petit HV.

PLoS One. 2014 Apr 7;9(4):e87949. doi: 10.1371/journal.pone.0087949. eCollection 2014.

19.

Identification and characterization of three novel lipases belonging to families II and V from Anaerovibrio lipolyticus 5ST.

Privé F, Kaderbhai NN, Girdwood S, Worgan HJ, Pinloche E, Scollan ND, Huws SA, Newbold CJ.

PLoS One. 2013 Aug 12;8(8):e69076. doi: 10.1371/journal.pone.0069076. eCollection 2013.

21.

Gene sets for utilization of primary and secondary nutrition supplies in the distal gut of endangered Iberian lynx.

Alcaide M, Messina E, Richter M, Bargiela R, Peplies J, Huws SA, Newbold CJ, Golyshin PN, Simón MA, López G, Yakimov MM, Ferrer M.

PLoS One. 2012;7(12):e51521. doi: 10.1371/journal.pone.0051521. Epub 2012 Dec 12.

22.

Successional colonization of perennial ryegrass by rumen bacteria.

Huws SA, Mayorga OL, Theodorou MK, Onime LA, Kim EJ, Cookson AH, Newbold CJ, Kingston-Smith AH.

Lett Appl Microbiol. 2013 Mar;56(3):186-96. doi: 10.1111/lam.12033. Epub 2013 Jan 11.

23.

Microbial β-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail.

Del Pozo MV, Fernández-Arrojo L, Gil-Martínez J, Montesinos A, Chernikova TN, Nechitaylo TY, Waliszek A, Tortajada M, Rojas A, Huws SA, Golyshina OV, Newbold CJ, Polaina J, Ferrer M, Golyshin PN.

Biotechnol Biofuels. 2012 Sep 21;5(1):73. doi: 10.1186/1754-6834-5-73.

24.

Ruminal protozoal contribution to the duodenal flow of fatty acids following feeding of steers on forages differing in chloroplast content.

Huws SA, Lee MR, Kingston-Smith AH, Kim EJ, Scott MB, Tweed JK, Scollan ND.

Br J Nutr. 2012 Dec 28;108(12):2207-14. doi: 10.1017/S0007114512000335. Epub 2012 Mar 1.

PMID:
22377337
25.

As yet uncultured bacteria phylogenetically classified as Prevotella, Lachnospiraceae incertae sedis and unclassified Bacteroidales, Clostridiales and Ruminococcaceae may play a predominant role in ruminal biohydrogenation.

Huws SA, Kim EJ, Lee MR, Scott MB, Tweed JK, Pinloche E, Wallace RJ, Scollan ND.

Environ Microbiol. 2011 Jun;13(6):1500-12. doi: 10.1111/j.1462-2920.2011.02452.x. Epub 2011 Mar 21.

PMID:
21418494
26.

Influence of temperature, oxygen and bacterial strain identity on the association of Campylobacter jejuni with Acanthamoeba castellanii.

Baré J, Sabbe K, Huws S, Vercauteren D, Braeckmans K, van Gremberghe I, Favoreel H, Houf K.

FEMS Microbiol Ecol. 2010 Nov;74(2):371-81. doi: 10.1111/j.1574-6941.2010.00955.x. Epub 2010 Aug 16.

27.

Plant-based strategies towards minimising 'livestock's long shadow'.

Kingston-Smith AH, Edwards JE, Huws SA, Kim EJ, Abberton M.

Proc Nutr Soc. 2010 Nov;69(4):613-20. doi: 10.1017/S0029665110001953. Epub 2010 Aug 4.

PMID:
20682089
28.

Forage type and fish oil cause shifts in rumen bacterial diversity.

Huws SA, Lee MR, Muetzel SM, Scott MB, Wallace RJ, Scollan ND.

FEMS Microbiol Ecol. 2010 Aug;73(2):396-407. doi: 10.1111/j.1574-6941.2010.00892.x. Epub 2010 Apr 20.

29.

Rumen protozoa are rich in polyunsaturated fatty acids due to the ingestion of chloroplasts.

Huws SA, Kim EJ, Kingston-Smith AH, Lee MR, Muetzel SM, Cookson AR, Newbold CJ, Wallace RJ, Scollan ND.

FEMS Microbiol Ecol. 2009 Sep;69(3):461-71. doi: 10.1111/j.1574-6941.2009.00717.x. Epub 2009 Jun 5.

30.

Effect of fish oil on ruminal biohydrogenation of C18 unsaturated fatty acids in steers fed grass or red clover silages.

Lee MR, Shingfield KJ, Tweed JK, Toivonen V, Huws SA, Scollan ND.

Animal. 2008 Dec;2(12):1859-69. doi: 10.1017/S1751731108002899.

PMID:
22444093
31.

Dynamics of initial colonization of nonconserved perennial ryegrass by anaerobic fungi in the bovine rumen.

Edwards JE, Kingston-Smith AH, Jimenez HR, Huws SA, Skøt KP, Griffith GW, McEwan NR, Theodorou MK.

FEMS Microbiol Ecol. 2008 Dec;66(3):537-45. doi: 10.1111/j.1574-6941.2008.00563.x. Epub 2008 Jul 30.

32.

Advances in microbial ecosystem concepts and their consequences for ruminant agriculture.

Edwards JE, Huws SA, Kim EJ, Lee MR, Kingston-Smith AH, Scollan ND.

Animal. 2008 May;2(5):653-60. doi: 10.1017/S1751731108002164.

PMID:
22443590
33.
34.

Interactions of some common pathogenic bacteria with Acanthamoeba polyphaga.

Huws SA, Morley RJ, Jones MV, Brown MR, Smith AW.

FEMS Microbiol Lett. 2008 May;282(2):258-65. doi: 10.1111/j.1574-6968.2008.01123.x. Epub 2008 Apr 9.

35.

Characterization of the dynamics of initial bacterial colonization of nonconserved forage in the bovine rumen.

Edwards JE, Huws SA, Kim EJ, Kingston-Smith AH.

FEMS Microbiol Ecol. 2007 Dec;62(3):323-35. Epub 2007 Oct 17. Erratum in: FEMS Microbiol Ecol. 2008 Jan;63(1):141-2.

36.

Specificity and sensitivity of eubacterial primers utilized for molecular profiling of bacteria within complex microbial ecosystems.

Huws SA, Edwards JE, Kim EJ, Scollan ND.

J Microbiol Methods. 2007 Sep;70(3):565-9. Epub 2007 Jun 30.

PMID:
17683816
37.
38.

Molecular analysis of the subgingival microbiota in health and disease.

Ledder RG, Gilbert P, Huws SA, Aarons L, Ashley MP, Hull PS, McBain AJ.

Appl Environ Microbiol. 2007 Jan;73(2):516-23. Epub 2006 Nov 3.

39.

Amoebae promote persistence of epidemic strains of MRSA.

Huws SA, Smith AW, Enright MC, Wood PJ, Brown MR.

Environ Microbiol. 2006 Jun;8(6):1130-3.

PMID:
16689734
40.

Protozoan grazing and its impact upon population dynamics in biofilm communities.

Huws SA, McBain AJ, Gilbert P.

J Appl Microbiol. 2005;98(1):238-44.

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