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Items: 43

1.

ECHO: an Application for Detection and Analysis of Oscillators Identifies Metabolic Regulation on Genome-Wide Circadian Output.

De Los Santos H, Collins EJ, Mann C, Sagan AW, Jankowski MS, Bennett KP, Hurley JM.

Bioinformatics. 2019 Aug 6. pii: btz617. doi: 10.1093/bioinformatics/btz617. [Epub ahead of print]

PMID:
31384918
2.

Circadian Proteomic Analysis Uncovers Mechanisms of Post-Transcriptional Regulation in Metabolic Pathways.

Hurley JM, Jankowski MS, De Los Santos H, Crowell AM, Fordyce SB, Zucker JD, Kumar N, Purvine SO, Robinson EW, Shukla A, Zink E, Cannon WR, Baker SE, Loros JJ, Dunlap JC.

Cell Syst. 2018 Dec 26;7(6):613-626.e5. doi: 10.1016/j.cels.2018.10.014. Epub 2018 Dec 12.

PMID:
30553726
3.

Brief training increases nurses' comfort using tele-ultrasound: A feasibility study.

Douglas TM, Levine AR, Olivieri PP, McCurdy MT, Papali A, Zubrow MT, Rodick KM, Hurley JM, Verceles AC.

Intensive Crit Care Nurs. 2019 Apr;51:45-49. doi: 10.1016/j.iccn.2018.11.004. Epub 2018 Dec 1.

PMID:
30514602
4.

Characterizing Time-of-Day Conformational Changes in the Intrinsically Disordered Proteins of the Circadian Clock.

Pelham JF, Mosier AE, Hurley JM.

Methods Enzymol. 2018;611:503-529. doi: 10.1016/bs.mie.2018.08.024. Epub 2018 Sep 25.

PMID:
30471697
5.

Applying the principles of isotope analysis in plant and animal ecology to forensic science in the Americas.

Chesson LA, Barnette JE, Bowen GJ, Brooks JR, Casale JF, Cerling TE, Cook CS, Douthitt CB, Howa JD, Hurley JM, Kreuzer HW, Lott MJ, Martinelli LA, O'Grady SP, Podlesak DW, Tipple BJ, Valenzuela LO, West JB.

Oecologia. 2018 Aug;187(4):1077-1094. doi: 10.1007/s00442-018-4188-1. Epub 2018 Jun 28. Review.

6.

Between-Leg Mechanical Differences as Measured by the Bulgarian Split-Squat: Exploring Asymmetries and Relationships with Sprint Acceleration.

Lockie RG, Risso FG, Lazar A, Giuliano DV, Stage AA, Liu TM, Beiley MD, Hurley JM, Torne IA, Stokes JJ, Birmingham-Babauta SA, Davis DL, Orjalo AJ, Moreno MR.

Sports (Basel). 2017 Sep 1;5(3). pii: E65. doi: 10.3390/sports5030065.

7.

A Pilot Study of Ultrasonography-Naïve Operators' Ability to Use Tele-Ultrasonography to Assess the Heart and Lung.

Olivieri PP, Verceles AC, Hurley JM, Zubrow MT, Jeudy J, McCurdy MT.

J Intensive Care Med. 2018 Jan 1:885066618777187. doi: 10.1177/0885066618777187. [Epub ahead of print]

PMID:
29806509
8.

Assessing Repeated-Sprint Ability in Division I Collegiate Women Soccer Players.

Lockie RG, Liu TM, Stage AA, Lazar A, Giuliano DV, Hurley JM, Torne IA, Beiley MD, Birmingham-Babauta SA, Stokes JJ, Risso FG, Davis DL, Moreno MR, Orjalo AJ.

J Strength Cond Res. 2018 Apr 26. doi: 10.1519/JSC.0000000000002527. [Epub ahead of print]

PMID:
29702517
9.

Evolution to environmental contamination ablates the circadian clock of an aquatic sentinel species.

Coldsnow KD, Relyea RA, Hurley JM.

Ecol Evol. 2017 Oct 28;7(23):10339-10349. doi: 10.1002/ece3.3490. eCollection 2017 Dec.

10.

Guidelines for Genome-Scale Analysis of Biological Rhythms.

Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, Crowell AM, DeBruyne JP, Dijk DJ, DiTacchio L, Doyle FJ, Duffield GE, Dunlap JC, Eckel-Mahan K, Esser KA, FitzGerald GA, Forger DB, Francey LJ, Fu YH, Gachon F, Gatfield D, de Goede P, Golden SS, Green C, Harer J, Harmer S, Haspel J, Hastings MH, Herzel H, Herzog ED, Hoffmann C, Hong C, Hughey JJ, Hurley JM, de la Iglesia HO, Johnson C, Kay SA, Koike N, Kornacker K, Kramer A, Lamia K, Leise T, Lewis SA, Li J, Li X, Liu AC, Loros JJ, Martino TA, Menet JS, Merrow M, Millar AJ, Mockler T, Naef F, Nagoshi E, Nitabach MN, Olmedo M, Nusinow DA, Ptáček LJ, Rand D, Reddy AB, Robles MS, Roenneberg T, Rosbash M, Ruben MD, Rund SSC, Sancar A, Sassone-Corsi P, Sehgal A, Sherrill-Mix S, Skene DJ, Storch KF, Takahashi JS, Ueda HR, Wang H, Weitz C, Westermark PO, Wijnen H, Xu Y, Wu G, Yoo SH, Young M, Zhang EE, Zielinski T, Hogenesch JB.

J Biol Rhythms. 2017 Oct;32(5):380-393. doi: 10.1177/0748730417728663. Epub 2017 Nov 3.

11.

Repeated-Sprint Ability in Division I Collegiate Male Soccer Players: Positional Differences and Relationships With Performance Tests.

Lockie RG, Moreno MR, Orjalo AJ, Stage AA, Liu TM, Birmingham-Babauta SA, Hurley JM, Torne IA, Beiley MD, Risso FG, Davis DL, Lazar A, Stokes JJ, Giuliano DV.

J Strength Cond Res. 2019 May;33(5):1362-1370. doi: 10.1519/JSC.0000000000001948.

PMID:
29045314
12.

The Neurospora Transcription Factor ADV-1 Transduces Light Signals and Temporal Information to Control Rhythmic Expression of Genes Involved in Cell Fusion.

Dekhang R, Wu C, Smith KM, Lamb TM, Peterson M, Bredeweg EL, Ibarra O, Emerson JM, Karunarathna N, Lyubetskaya A, Azizi E, Hurley JM, Dunlap JC, Galagan JE, Freitag M, Sachs MS, Bell-Pedersen D.

G3 (Bethesda). 2017 Jan 5;7(1):129-142. doi: 10.1534/g3.116.034298.

13.

Circadian Oscillators: Around the Transcription-Translation Feedback Loop and on to Output.

Hurley JM, Loros JJ, Dunlap JC.

Trends Biochem Sci. 2016 Oct;41(10):834-846. doi: 10.1016/j.tibs.2016.07.009. Epub 2016 Aug 3. Review.

14.

Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock.

Conrad KS, Hurley JM, Widom J, Ringelberg CS, Loros JJ, Dunlap JC, Crane BR.

EMBO J. 2016 Aug 1;35(15):1707-19. doi: 10.15252/embj.201694327. Epub 2016 Jun 23.

15.

Physiological Characteristics of Incoming Freshmen Field Players in a Men's Division I Collegiate Soccer Team.

Lockie RG, Davis DL, Birmingham-Babauta SA, Beiley MD, Hurley JM, Stage AA, Stokes JJ, Tomita TM, Torne IA, Lazar A.

Sports (Basel). 2016 Jun 8;4(2). pii: E34. doi: 10.3390/sports4020034.

16.

The circadian system as an organizer of metabolism.

Hurley JM, Loros JJ, Dunlap JC.

Fungal Genet Biol. 2016 May;90:39-43. doi: 10.1016/j.fgb.2015.10.002. Epub 2015 Oct 20. Review.

17.

Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.

Hurley JM, Dasgupta A, Emerson JM, Zhou X, Ringelberg CS, Knabe N, Lipzen AM, Lindquist EA, Daum CG, Barry KW, Grigoriev IV, Smith KM, Galagan JE, Bell-Pedersen D, Freitag M, Cheng C, Loros JJ, Dunlap JC.

Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):16995-7002. doi: 10.1073/pnas.1418963111. Epub 2014 Oct 31.

18.

Conserved RNA helicase FRH acts nonenzymatically to support the intrinsically disordered neurospora clock protein FRQ.

Hurley JM, Larrondo LF, Loros JJ, Dunlap JC.

Mol Cell. 2013 Dec 26;52(6):832-43. doi: 10.1016/j.molcel.2013.11.005. Epub 2013 Dec 5.

19.

Cell biology: A fable of too much too fast.

Hurley JM, Dunlap JC.

Nature. 2013 Mar 7;495(7439):57-8. doi: 10.1038/nature11952. Epub 2013 Feb 17. No abstract available.

20.

Light-inducible system for tunable protein expression in Neurospora crassa.

Hurley JM, Chen CH, Loros JJ, Dunlap JC.

G3 (Bethesda). 2012 Oct;2(10):1207-12. doi: 10.1534/g3.112.003939. Epub 2012 Oct 1.

21.

Clostridium difficile MazF toxin exhibits selective, not global, mRNA cleavage.

Rothenbacher FP, Suzuki M, Hurley JM, Montville TJ, Kirn TJ, Ouyang M, Woychik NA.

J Bacteriol. 2012 Jul;194(13):3464-74. doi: 10.1128/JB.00217-12. Epub 2012 Apr 27.

22.

Bacterial toxin RelE mediates frequent codon-independent mRNA cleavage from the 5' end of coding regions in vivo.

Hurley JM, Cruz JW, Ouyang M, Woychik NA.

J Biol Chem. 2011 Apr 29;286(17):14770-8. doi: 10.1074/jbc.M110.108969. Epub 2011 Feb 15.

23.

Crystal structures of Phd-Doc, HigA, and YeeU establish multiple evolutionary links between microbial growth-regulating toxin-antitoxin systems.

Arbing MA, Handelman SK, Kuzin AP, Verdon G, Wang C, Su M, Rothenbacher FP, Abashidze M, Liu M, Hurley JM, Xiao R, Acton T, Inouye M, Montelione GT, Woychik NA, Hunt JF.

Structure. 2010 Aug 11;18(8):996-1010. doi: 10.1016/j.str.2010.04.018.

24.

Stable isotope models to predict geographic origin and cultivation conditions of marijuana.

Hurley JM, West JB, Ehleringer JR.

Sci Justice. 2010 Jun;50(2):86-93. doi: 10.1016/j.scijus.2009.11.003. Epub 2010 Jan 8.

PMID:
20470741
25.

The stable isotope ratios of marijuana. II. Strontium isotopes relate to geographic origin.

West JB, Hurley JM, Dudás FO, Ehleringer JR.

J Forensic Sci. 2009 Nov;54(6):1261-9. doi: 10.1111/j.1556-4029.2009.01171.x. Epub 2009 Oct 5.

PMID:
19804525
26.

Tracing retail cannabis in the United States: geographic origin and cultivation patterns.

Hurley JM, West JB, Ehleringer JR.

Int J Drug Policy. 2010 May;21(3):222-8. doi: 10.1016/j.drugpo.2009.08.001. Epub 2009 Sep 17.

PMID:
19765966
27.

Bacterial toxin HigB associates with ribosomes and mediates translation-dependent mRNA cleavage at A-rich sites.

Hurley JM, Woychik NA.

J Biol Chem. 2009 Jul 10;284(28):18605-13. doi: 10.1074/jbc.M109.008763. Epub 2009 May 7.

28.

Potassium sorbate residue levels and persistence in citrus fruit as detected by a simple colorimetric method.

Montesinos-Herrero C, Smilanick JL, Hurley JM, Palou L.

J Agric Food Chem. 2009 May 13;57(9):3458-63. doi: 10.1021/jf900070k.

PMID:
19334786
29.

Stable isotope ratios of marijuana. I. Carbon and nitrogen stable isotopes describe growth conditions.

West JB, Hurley JM, Ehleringer JR.

J Forensic Sci. 2009 Jan;54(1):84-9. doi: 10.1111/j.1556-4029.2008.00909.x. Epub 2008 Nov 1.

PMID:
19040673
30.

A birth-to-death view of mRNA from the RNA recognition motif perspective.

Kinzy TG, De Stefano LA, Esposito AM, Hurley JM, Roy R, Valentin-Acevedo AJ, Chang KH, Davila J, Defren JM, Donovan J, Irizarry-Barreto P, Soto A, Ysla RM, Copeland HL, Copeland PR.

Biochem Mol Biol Educ. 2008 Jan;36(1):1-8. doi: 10.1002/bmb.20149.

31.

Sampling almonds for aflatoxin, part II: estimating risks associated with various sampling plan designs.

Whitaker TB, Slate AB, Hurley JM, Giesbrecht FG.

J AOAC Int. 2007 May-Jun;90(3):778-85.

PMID:
17580630
32.

Sampling almonds for aflatoxin, part I: estimation of uncertainty associated with sampling, sample preparation, and analysis.

Whitaker TB, Slate AB, Jacobs M, Hurley JM, Adams JG, Giesbrecht FG.

J AOAC Int. 2006 Jul-Aug;89(4):1027-34.

PMID:
16915840
33.

Design considerations and effects of LNA in PCR primers.

Latorra D, Arar K, Hurley JM.

Mol Cell Probes. 2003 Oct;17(5):253-9.

PMID:
14580400
34.

Enhanced allele-specific PCR discrimination in SNP genotyping using 3' locked nucleic acid (LNA) primers.

Latorra D, Campbell K, Wolter A, Hurley JM.

Hum Mutat. 2003 Jul;22(1):79-85.

PMID:
12815597
35.

Multiplex allele-specific PCR with optimized locked nucleic acid primers.

Latorra D, Hopkins D, Campbell K, Hurley JM.

Biotechniques. 2003 Jun;34(6):1150-2, 1154, 1158. No abstract available.

36.
37.

Slipped capital femoral epiphysis. The prevalence of late contralateral slip.

Hurley JM, Betz RR, Loder RT, Davidson RS, Alburger PD, Steel HH.

J Bone Joint Surg Am. 1996 Feb;78(2):226-30.

PMID:
8609113
38.

Detecting alerts, notifying the physician, and offering action items: a comprehensive alerting system.

Kuperman GJ, Teich JM, Bates DW, Hiltz FL, Hurley JM, Lee RY, Paterno MD.

Proc AMIA Annu Fall Symp. 1996:704-8.

39.

Identification of class II major histocompatibility complex and T cell receptor binding sites in the superantigen toxic shock syndrome toxin 1.

Hurley JM, Shimonkevitz R, Hanagan A, Enney K, Boen E, Malmstrom S, Kotzin BL, Matsumura M.

J Exp Med. 1995 Jun 1;181(6):2229-35.

40.

Assembly of the bacteriophage T4 replication machine requires the acidic carboxy terminus of gene 32 protein.

Hurley JM, Chervitz SA, Jarvis TC, Singer BS, Gold L.

J Mol Biol. 1993 Jan 20;229(2):398-418.

PMID:
8429554
41.

Purification of the mosquitocidal and cytolytic proteins of Bacillus thuringiensis subsp. israelensis.

Hurley JM, Bulla LA Jr, Andrews RE Jr.

Appl Environ Microbiol. 1987 Jun;53(6):1316-21.

42.

Separation of the cytolytic and mosquitocidal proteins of Bacillus thuringiensis subsp. israelensis.

Hurley JM, Lee SG, Andrews RE Jr, Klowden MJ, Bulla LA Jr.

Biochem Biophys Res Commun. 1985 Jan 31;126(2):961-5.

PMID:
2858208
43.

Correspondence.

Hurley JM.

Cal State J Med. 1903 Jan;1(3):68-9. No abstract available.

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