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Items: 1 to 50 of 74


Comparing Region of Interest vs. Voxel-Wise Diffusion Tensor Imaging Analytic Methods in Mild and Moderate Traumatic Brain Injury: A Systematic Review and Meta-Analysis.

Hunter LE, Lubin N, Glassman N, Xue X, Spira M, Lipton ML.

J Neurotrauma. 2018 Oct 30. doi: 10.1089/neu.2018.5838. [Epub ahead of print]


EDUCATIONAL SERIES IN CONGENITAL HEART DISEASE: Prenatal diagnosis of congenital heart disease

Hunter LE, Seale AN.

Echo Res Pract. 2018 Sep 1;5(3):R81-R100. doi: 10.1530/ERP-18-0027.


MRI-defined White Matter Microstructural Alteration Associated with Soccer Heading Is More Extensive in Women than Men.

Rubin TG, Catenaccio E, Fleysher R, Hunter LE, Lubin N, Stewart WF, Kim M, Lipton RB, Lipton ML.

Radiology. 2018 Nov;289(2):478-486. doi: 10.1148/radiol.2018180217. Epub 2018 Jul 31.


EDUCATIONAL SERIES IN CONGENITAL HEART DISEASE: Prenatal diagnosis of congenital heart disease.

Hunter LE, Seale AN.

Echo Res Pract. 2018 Sep;5(3):R81-R100. doi: 10.1530/ERP-18-0027. Epub 2018 Jul 16. Review.


Heading and unintentional head impacts have opposing associations with Patient Reported Outcomes in amateur soccer players.

Hunter LE, Ifrah C, Zimmerman ME, Kim M, Lipton RB, Stewart WF, Lipton ML.

Res Sports Med. 2018 Oct-Dec;26(4):390-400. doi: 10.1080/15438627.2018.1492396. Epub 2018 Jul 13.


The neurobiological effects of repetitive head impacts in collision sports.

Hunter LE, Branch CA, Lipton ML.

Neurobiol Dis. 2019 Mar;123:122-126. doi: 10.1016/j.nbd.2018.06.016. Epub 2018 Jun 21. Review.


Three Dimensions of Reproducibility in Natural Language Processing.

Cohen KB, Xia J, Zweigenbaum P, Callahan TJ, Hargraves O, Goss F, Ide N, Névéol A, Grouin C, Hunter LE.

LREC Int Conf Lang Resour Eval. 2018 May;2018:156-165.


Stimulus generalization as a mechanism for learning to trust.

FeldmanHall O, Dunsmoor JE, Tompary A, Hunter LE, Todorov A, Phelps EA.

Proc Natl Acad Sci U S A. 2018 Feb 13;115(7):E1690-E1697. doi: 10.1073/pnas.1715227115. Epub 2018 Jan 29.


Semantic Relations in Compound Nouns: Perspectives from Inter-Annotator Agreement.

Yadav P, Jezek E, Bouillon P, Callahan TJ, Bada M, Hunter LE, Cohen KB.

Stud Health Technol Inform. 2017;245:644-648.


Translational Morphosyntax: Distribution of Negation in Clinical Records and Biomedical Journal Articles.

Cohen KB, Goss FR, Zweigenbaum P, Hunter LE.

Stud Health Technol Inform. 2017;245:346-350.


Improving precision in concept normalization.

Boguslav M, Cohen KB, Baumgartner WA, Hunter LE.

Pac Symp Biocomput. 2018;23:566-577.


OWL-NETS: Transforming OWL Representations for Improved Network Inference.

Callahan TJ, Baumgartner WA, Bada M, Stefanski AL, Tripodi I, White EK, Hunter LE.

Pac Symp Biocomput. 2018;23:133-144.


Developing and Testing the Health Care Safety Hotline: A Prototype Consumer Reporting System for Patient Safety Events.

Schneider EC, Ridgely MS, Quigley DD, Hunter LE, Leuschner KJ, Weingart SN, Weissman JS, Zimmer KP, Giannini RC.

Rand Health Q. 2017 Jun 19;6(3):1. eCollection 2017 Jun.


Coreference annotation and resolution in the Colorado Richly Annotated Full Text (CRAFT) corpus of biomedical journal articles.

Cohen KB, Lanfranchi A, Choi MJ, Bada M, Baumgartner WA Jr, Panteleyeva N, Verspoor K, Palmer M, Hunter LE.

BMC Bioinformatics. 2017 Aug 17;18(1):372. doi: 10.1186/s12859-017-1775-9.


Intraglomerular gap junctions enhance interglomerular synchrony in a sparsely connected olfactory bulb network.

Pouille F, McTavish TS, Hunter LE, Restrepo D, Schoppa NE.

J Physiol. 2017 Sep 1;595(17):5965-5986. doi: 10.1113/JP274408. Epub 2017 Jul 23.


Implementation and evaluation of a prototype consumer reporting system for patient safety events.

Weingart SN, Weissman JS, Zimmer KP, Giannini RC, Quigley DD, Hunter LE, Ridgely MS, Schneider EC.

Int J Qual Health Care. 2017 Aug 1;29(4):521-526. doi: 10.1093/intqhc/mzx060.


Systems biology of facial development: contributions of ectoderm and mesenchyme.

Hooper JE, Feng W, Li H, Leach SM, Phang T, Siska C, Jones KL, Spritz RA, Hunter LE, Williams T.

Dev Biol. 2017 Jun 1;426(1):97-114. doi: 10.1016/j.ydbio.2017.03.025. Epub 2017 Mar 29.


Celebrating parasites.

Greene CS, Garmire LX, Gilbert JA, Ritchie MD, Hunter LE.

Nat Genet. 2017 Mar 30;49(4):483-484. doi: 10.1038/ng.3830. No abstract available.


Knowledge-based biomedical Data Science.

Hunter LE.

EPJ Data Sci. 2017;1(1-2):19-25. doi: 10.3233/DS-170001. Epub 2017 Dec 8.



Moore JH, Jennings SF, Greene CS, Hunter LE, Perkins AD, Williams-Devane C, Wunsch DC, Zhao Z, Huang X.

Pac Symp Biocomput. 2017;22:646-648. doi: 10.1142/9789813207813_0060.


Gene Ontology synonym generation rules lead to increased performance in biomedical concept recognition.

Funk CS, Cohen KB, Hunter LE, Verspoor KM.

J Biomed Semantics. 2016 Sep 9;7:52. doi: 10.1186/s13326-016-0096-7.


Reproducibility in Natural Language Processing: A Case Study of Two R Libraries for Mining PubMed/MEDLINE.

Cohen KB, Xia J, Roeder C, Hunter LE.

LREC Int Conf Lang Resour Eval. 2016 May;2016(W23):6-12.


Episodic memories predict adaptive value-based decision-making.

Murty VP, FeldmanHall O, Hunter LE, Phelps EA, Davachi L.

J Exp Psychol Gen. 2016 May;145(5):548-558. doi: 10.1037/xge0000158. Epub 2016 Mar 21.


A survey of computational tools for downstream analysis of proteomic and other omic datasets.

Karimpour-Fard A, Epperson LE, Hunter LE.

Hum Genomics. 2015 Oct 28;9:28. doi: 10.1186/s40246-015-0050-2. Review.


Prenatal diagnosis of left ventricular diverticulum and coarctation of the aorta.

Hunter LE, Pushparajah K, Miller O, Anderson D, Simpson JM.

Ultrasound Obstet Gynecol. 2016 Feb;47(2):236-8. doi: 10.1002/uog.15746.


Fetal aortic valve stenosis: a critique of case selection criteria for fetal intervention.

Hunter LE, Chubb H, Miller O, Sharland G, Simpson JM.

Prenat Diagn. 2015 Dec;35(12):1176-81. doi: 10.1002/pd.4661. Epub 2015 Sep 3.


Atrioventricular block during fetal life.

Hunter LE, Simpson JM.

J Saudi Heart Assoc. 2015 Jul;27(3):164-78. doi: 10.1016/j.jsha.2014.07.001. Epub 2014 Jul 10. Review.


Visual analysis of biological data-knowledge networks.

Vehlow C, Kao DP, Bristow MR, Hunter LE, Weiskopf D, Görg C.

BMC Bioinformatics. 2015 Apr 29;16:135. doi: 10.1186/s12859-015-0550-z.


KaBOB: ontology-based semantic integration of biomedical databases.

Livingston KM, Bada M, Baumgartner WA Jr, Hunter LE.

BMC Bioinformatics. 2015 Apr 23;16:126. doi: 10.1186/s12859-015-0559-3.


Training the next generation of quantitative biologists in the era of big data.

Pattin KA, Greene AC, Altman RB, Cohen KB, Wethington E, Görg C, Hunter LE, Muse SV, Radivojac P, Moore JH.

Pac Symp Biocomput. 2015:488-92.


Peax: interactive visual analysis and exploration of complex clinical phenotype and gene expression association.

Hinterberg MA, Kao DP, Bristow MR, Hunter LE, Port JD, Görg C.

Pac Symp Biocomput. 2015:419-30.


A twentieth anniversary tribute to PSB.

Hewett D, Whirl-Carrillo M, Hunter LE, Altman RB, Klein TE.

Pac Symp Biocomput. 2015:1-7.


Promoting Patient Safety Through Effective Health Information Technology Risk Management.

Schneider EC, Ridgely MS, Meeker D, Hunter LE, Khodyakov D, Rudin RS.

Rand Health Q. 2014 Dec 30;4(3):7. eCollection 2014 Dec 30.


The Role of Health Care Transformation for the Chinese Dream: Powering Economic Growth, Promoting a Harmonious Society.

Mattke S, Liu H, Hunter LE, Gu K, Newberry S.

Rand Health Q. 2014 Dec 30;4(3):4. eCollection 2014 Dec 30.


Ontology translation: A case study on translating the Gene Ontology from English to German.

Hailu ND, Cohen KB, Hunter LE.

Nat Lang Process Inf Syst. 2014 Jun;8455:33-38. doi: 10.1007/978-3-319-07983-7_4.


Prenatal screening for structural congenital heart disease.

Hunter LE, Simpson JM.

Nat Rev Cardiol. 2014 Jun;11(6):323-34. doi: 10.1038/nrcardio.2014.34. Epub 2014 Mar 25. Review.


Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters.

Funk C, Baumgartner W Jr, Garcia B, Roeder C, Bada M, Cohen KB, Hunter LE, Verspoor K.

BMC Bioinformatics. 2014 Feb 26;15:59. doi: 10.1186/1471-2105-15-59.


Building the next generation of quantitative biologists.

Pattin KA, Greene AC, Altman RB, Hunter LE, Ross DA, Foster JA, Moore JH.

Pac Symp Biocomput. 2014:417-21.


Combining heterogenous data for prediction of disease related and pharmacogenes.

Funk CS, Hunter LE, Cohen KB.

Pac Symp Biocomput. 2014:328-39.


Representing annotation compositionality and provenance for the Semantic Web.

Livingston KM, Bada M, Hunter LE, Verspoor K.

J Biomed Semantics. 2013 Nov 22;4:38. doi: 10.1186/2041-1480-4-38. eCollection 2013.


Rocky mountain conference on bioinformatics celebrates 10 years.

Hunter LE.

PLoS Comput Biol. 2013;9(5):e1003076. doi: 10.1371/journal.pcbi.1003076. Epub 2013 May 30. No abstract available.


Chapter 16: text mining for translational bioinformatics.

Cohen KB, Hunter LE.

PLoS Comput Biol. 2013 Apr;9(4):e1003044. doi: 10.1371/journal.pcbi.1003044. Epub 2013 Apr 25.


Molecular profiling reveals prognostically significant subtypes of canine lymphoma.

Frantz AM, Sarver AL, Ito D, Phang TL, Karimpour-Fard A, Scott MC, Valli VE, Lindblad-Toh K, Burgess KE, Husbands BD, Henson MS, Borgatti A, Kisseberth WC, Hunter LE, Breen M, O'Brien TD, Modiano JF.

Vet Pathol. 2013 Jul;50(4):693-703. doi: 10.1177/0300985812465325. Epub 2012 Nov 2.


Nurse Practitioners and Sexual and Reproductive Health Services: An Analysis of Supply and Demand.

Auerbach DI, Pearson ML, Taylor D, Battistelli M, Sussell J, Hunter LE, Schnyer C, Schneider EC.

Rand Health Q. 2012 Sep 1;2(3):3. eCollection 2012 Fall.


A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools.

Verspoor K, Cohen KB, Lanfranchi A, Warner C, Johnson HL, Roeder C, Choi JD, Funk C, Malenkiy Y, Eckert M, Xue N, Baumgartner WA Jr, Bada M, Palmer M, Hunter LE.

BMC Bioinformatics. 2012 Aug 17;13:207. doi: 10.1186/1471-2105-13-207.


Reporting actionable research results: shared secrets can save lives.

Hunter LE, Hopfer C, Terry SF, Coors ME.

Sci Transl Med. 2012 Jul 18;4(143):143cm8. doi: 10.1126/scitranslmed.3003958.


Concept annotation in the CRAFT corpus.

Bada M, Eckert M, Evans D, Garcia K, Shipley K, Sitnikov D, Baumgartner WA Jr, Cohen KB, Verspoor K, Blake JA, Hunter LE.

BMC Bioinformatics. 2012 Jul 9;13:161. doi: 10.1186/1471-2105-13-161.


AMIA Board white paper: definition of biomedical informatics and specification of core competencies for graduate education in the discipline.

Kulikowski CA, Shortliffe EH, Currie LM, Elkin PL, Hunter LE, Johnson TR, Kalet IJ, Lenert LA, Musen MA, Ozbolt JG, Smith JW, Tarczy-Hornoch PZ, Williamson JJ.

J Am Med Inform Assoc. 2012 Nov-Dec;19(6):931-8. doi: 10.1136/amiajnl-2012-001053. Epub 2012 Jun 8.


Kidney proteome changes provide evidence for a dynamic metabolism and regional redistribution of plasma proteins during torpor-arousal cycles of hibernation.

Jani A, Orlicky DJ, Karimpour-Fard A, Epperson LE, Russell RL, Hunter LE, Martin SL.

Physiol Genomics. 2012 Jul 15;44(14):717-27. doi: 10.1152/physiolgenomics.00010.2012. Epub 2012 May 29.

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