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Items: 1 to 50 of 99

1.

Transcriptome Landscape Variation in the Genus Thymus.

Soorni A, Borna T, Alemardan A, Chakrabarti M, Hunt AG, Bombarely A.

Genes (Basel). 2019 Aug 16;10(8). pii: E620. doi: 10.3390/genes10080620.

2.

Occurrence and Sources of Radium in Groundwater Associated with Oil Fields in the Southern San Joaquin Valley, California.

McMahon PB, Vengosh A, Davis TA, Landon MK, Tyne RL, Wright MT, Kulongoski JT, Hunt AG, Barry PH, Kondash AJ, Wang Z, Ballentine CJ.

Environ Sci Technol. 2019 Aug 20;53(16):9398-9406. doi: 10.1021/acs.est.9b02395. Epub 2019 Aug 7.

PMID:
31390186
3.

Hydrocarbons in Upland Groundwater, Marcellus Shale Region, Northeastern Pennsylvania and Southern New York, U.S.A.

McMahon PB, Lindsey BD, Conlon MD, Hunt AG, Belitz K, Jurgens BC, Varela BA.

Environ Sci Technol. 2019 Jul 16;53(14):8027-8035. doi: 10.1021/acs.est.9b01440. Epub 2019 Jun 27.

PMID:
31246428
4.

Root Hair Single Cell Type Specific Profiles of Gene Expression and Alternative Polyadenylation Under Cadmium Stress.

Cao J, Ye C, Hao G, Dabney-Smith C, Hunt AG, Li QQ.

Front Plant Sci. 2019 May 10;10:589. doi: 10.3389/fpls.2019.00589. eCollection 2019.

5.

The polyadenylation factor FIP1 is important for plant development and root responses to abiotic stresses.

Téllez-Robledo B, Manzano C, Saez A, Navarro-Neila S, Silva-Navas J, de Lorenzo L, González-García MP, Toribio R, Hunt AG, Baigorri R, Casimiro I, Brady SM, Castellano MM, Del Pozo JC.

Plant J. 2019 May 20. doi: 10.1111/tpj.14416. [Epub ahead of print]

PMID:
31111599
6.

Characterization of mRNA polyadenylation in the apicomplexa.

Stevens AT, Howe DK, Hunt AG.

PLoS One. 2018 Aug 30;13(8):e0203317. doi: 10.1371/journal.pone.0203317. eCollection 2018.

7.

Genome-wide atlas of alternative polyadenylation in the forage legume red clover.

Chakrabarti M, Dinkins RD, Hunt AG.

Sci Rep. 2018 Jul 27;8(1):11379. doi: 10.1038/s41598-018-29699-7.

8.

Pipecolic acid confers systemic immunity by regulating free radicals.

Wang C, Liu R, Lim GH, de Lorenzo L, Yu K, Zhang K, Hunt AG, Kachroo A, Kachroo P.

Sci Adv. 2018 May 30;4(5):eaar4509. doi: 10.1126/sciadv.aar4509. eCollection 2018 May.

9.

Methane in groundwater from a leaking gas well, Piceance Basin, Colorado, USA.

McMahon PB, Thomas JC, Crawford JT, Dornblaser MM, Hunt AG.

Sci Total Environ. 2018 Sep 1;634:791-801. doi: 10.1016/j.scitotenv.2018.03.371. Epub 2018 Apr 10.

PMID:
29653424
10.

KELCH F-BOX protein positively influences Arabidopsis seed germination by targeting PHYTOCHROME-INTERACTING FACTOR1.

Majee M, Kumar S, Kathare PK, Wu S, Gingerich D, Nayak NR, Salaita L, Dinkins R, Martin K, Goodin M, Dirk LMA, Lloyd TD, Zhu L, Chappell J, Hunt AG, Vierstra R, Huq E, Downie AB.

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):E4120-E4129. doi: 10.1073/pnas.1711919115. Epub 2018 Apr 9.

11.

Methane and Benzene in Drinking-Water Wells Overlying the Eagle Ford, Fayetteville, and Haynesville Shale Hydrocarbon Production Areas.

McMahon PB, Barlow JRB, Engle MA, Belitz K, Ging PB, Hunt AG, Jurgens BC, Kharaka YK, Tollett RW, Kresse TM.

Environ Sci Technol. 2017 Jun 20;51(12):6727-6734. doi: 10.1021/acs.est.7b00746. Epub 2017 May 31.

PMID:
28562061
12.

Noncanonical Alternative Polyadenylation Contributes to Gene Regulation in Response to Hypoxia.

de Lorenzo L, Sorenson R, Bailey-Serres J, Hunt AG.

Plant Cell. 2017 Jun;29(6):1262-1277. doi: 10.1105/tpc.16.00746. Epub 2017 May 30.

13.

De novo Transcriptome Assembly and Dynamic Spatial Gene Expression Analysis in Red Clover.

Chakrabarti M, Dinkins RD, Hunt AG.

Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2015.06.0048.

14.

Plasmodesmata Localizing Proteins Regulate Transport and Signaling during Systemic Acquired Immunity in Plants.

Lim GH, Shine MB, de Lorenzo L, Yu K, Cui W, Navarre D, Hunt AG, Lee JY, Kachroo A, Kachroo P.

Cell Host Microbe. 2016 Apr 13;19(4):541-9. doi: 10.1016/j.chom.2016.03.006.

15.

Experimental Genome-Wide Determination of RNA Polyadenylation in Chlamydomonas reinhardtii.

Bell SA, Shen C, Brown A, Hunt AG.

PLoS One. 2016 Jan 5;11(1):e0146107. doi: 10.1371/journal.pone.0146107. eCollection 2016.

16.

Scaling of geochemical reaction rates via advective solute transport.

Hunt AG, Ghanbarian B, Skinner TE, Ewing RP.

Chaos. 2015 Jul;25(7):075403. doi: 10.1063/1.4913257.

PMID:
26232976
17.

CPSF30 at the Interface of Alternative Polyadenylation and Cellular Signaling in Plants.

Chakrabarti M, Hunt AG.

Biomolecules. 2015 Jun 8;5(2):1151-68. doi: 10.3390/biom5021151. Review.

18.

Preface. Polyadenylation in plants.

Hunt AG, Li QQ.

Methods Mol Biol. 2015;1255:v-vi. No abstract available.

PMID:
25632413
19.

Integration of developmental and environmental signals via a polyadenylation factor in Arabidopsis.

Liu M, Xu R, Merrill C, Hong L, Von Lanken C, Hunt AG, Li QQ.

PLoS One. 2014 Dec 29;9(12):e115779. doi: 10.1371/journal.pone.0115779. eCollection 2014.

20.

A rapid, simple, and inexpensive method for the preparation of strand-specific RNA-Seq libraries.

Hunt AG.

Methods Mol Biol. 2015;1255:195-207. doi: 10.1007/978-1-4939-2175-1_17.

PMID:
25487215
21.

Genome-wide determination of poly(A) site choice in plants.

Pati PK, Ma L, Hunt AG.

Methods Mol Biol. 2015;1255:159-74. doi: 10.1007/978-1-4939-2175-1_14.

PMID:
25487212
22.

Phage display library screening for identification of interacting protein partners.

Addepalli B, Rao S, Hunt AG.

Methods Mol Biol. 2015;1255:147-58. doi: 10.1007/978-1-4939-2175-1_13.

PMID:
25487211
23.

A 3' RACE protocol to confirm polyadenylation sites.

Ma L, Hunt AG.

Methods Mol Biol. 2015;1255:135-44. doi: 10.1007/978-1-4939-2175-1_12.

PMID:
25487210
24.

Transient expression using agroinfiltration to study polyadenylation in plants.

Von Lanken C, Hunt AG.

Methods Mol Biol. 2015;1255:127-33. doi: 10.1007/978-1-4939-2175-1_11.

PMID:
25487209
25.

Quality and age of shallow groundwater in the Bakken Formation production area, Williston Basin, Montana and North Dakota.

McMahon PB, Caldwell RR, Galloway JM, Valder JF, Hunt AG.

Ground Water. 2015 Apr;53 Suppl 1:81-94. doi: 10.1111/gwat.12296. Epub 2014 Nov 13.

PMID:
25392910
26.

The Arabidopsis polyadenylation factor subunit CPSF30 as conceptual link between mRNA polyadenylation and cellular signaling.

Hunt AG.

Curr Opin Plant Biol. 2014 Oct;21:128-132. doi: 10.1016/j.pbi.2014.07.002. Epub 2014 Aug 9. Review.

PMID:
25104048
27.

Genome-wide determination of poly(A) sites in Medicago truncatula: evolutionary conservation of alternative poly(A) site choice.

Wu X, Gaffney B, Hunt AG, Li QQ.

BMC Genomics. 2014 Jul 21;15:615. doi: 10.1186/1471-2164-15-615.

28.

Prodigious degassing of a billion years of accumulated radiogenic helium at Yellowstone.

Lowenstern JB, Evans WC, Bergfeld D, Hunt AG.

Nature. 2014 Feb 20;506(7488):355-8. doi: 10.1038/nature12992.

PMID:
24553240
29.

Evidence for high salinity of Early Cretaceous sea water from the Chesapeake Bay crater.

Sanford WE, Doughten MW, Coplen TB, Hunt AG, Bullen TD.

Nature. 2013 Nov 14;503(7475):252-6. doi: 10.1038/nature12714.

PMID:
24226889
30.

Groundwater ages and mixing in the Piceance Basin natural gas province, Colorado.

McMahon PB, Thomas JC, Hunt AG.

Environ Sci Technol. 2013;47(23):13250-7. doi: 10.1021/es402473c. Epub 2013 Nov 13.

PMID:
24187946
31.

High throughput characterizations of poly(A) site choice in plants.

Ma L, Pati PK, Liu M, Li QQ, Hunt AG.

Methods. 2014 May 1;67(1):74-83. doi: 10.1016/j.ymeth.2013.06.037. Epub 2013 Jul 11.

32.

Saturation dependence of dispersion in porous media.

Ghanbarian-Alavijeh B, Skinner TE, Hunt AG.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Dec;86(6 Pt 2):066316. Epub 2012 Dec 19.

PMID:
23368047
33.

Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants.

Hunt AG, Xing D, Li QQ.

BMC Genomics. 2012 Nov 20;13:641. doi: 10.1186/1471-2164-13-641.

34.

Genome-wide control of polyadenylation site choice by CPSF30 in Arabidopsis.

Thomas PE, Wu X, Liu M, Gaffney B, Ji G, Li QQ, Hunt AG.

Plant Cell. 2012 Nov;24(11):4376-88. doi: 10.1105/tpc.112.096107. Epub 2012 Nov 6.

35.

Comments on "More general capillary pressure and relative permeability models from fractal geometry" by Kewen Li.

Ghanbarian-Alavijeh B, Hunt AG.

J Contam Hydrol. 2012 Oct;140-141:21-3. doi: 10.1016/j.jconhyd.2012.08.004. Epub 2012 Aug 24. No abstract available.

PMID:
22982613
36.

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

Wu X, Liu M, Downie B, Liang C, Ji G, Li QQ, Hunt AG.

Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12533-8. doi: 10.1073/pnas.1019732108. Epub 2011 Jul 11.

37.

RNA regulatory elements and polyadenylation in plants.

Hunt AG.

Front Plant Sci. 2012 Jan 4;2:109. doi: 10.3389/fpls.2011.00109. eCollection 2011.

38.

A disulfide linkage in a CCCH zinc finger motif of an Arabidopsis CPSF30 ortholog.

Addepalli B, Limbach PA, Hunt AG.

FEBS Lett. 2010 Nov 5;584(21):4408-12. doi: 10.1016/j.febslet.2010.09.043. Epub 2010 Oct 1.

39.

The Arabidopsis ortholog of the 77 kDa subunit of the cleavage stimulatory factor (AtCstF-77) involved in mRNA polyadenylation is an RNA-binding protein.

Bell SA, Hunt AG.

FEBS Lett. 2010 Apr 16;584(8):1449-54. doi: 10.1016/j.febslet.2010.03.007. Epub 2010 Mar 6.

40.

Characterization of genes encoding poly(A) polymerases in plants: evidence for duplication and functional specialization.

Meeks LR, Addepalli B, Hunt AG.

PLoS One. 2009 Nov 26;4(11):e8082. doi: 10.1371/journal.pone.0008082.

42.

Vulnerability of a public supply well in a karstic aquifer to contamination.

Katz BG, McBride WS, Hunt AG, Crandall CA, Metz PA, Eberts SM, Berndt MP.

Ground Water. 2009 May-Jun;47(3):438-52. doi: 10.1111/j.1745-6584.2008.00504.x. Epub 2008 Sep 24.

PMID:
18823399
43.

Messenger RNA 3' end formation in plants.

Hunt AG.

Curr Top Microbiol Immunol. 2008;326:151-77. Review.

PMID:
18630752
44.

Ribonuclease activity is a common property of Arabidopsis CCCH-containing zinc-finger proteins.

Addepalli B, Hunt AG.

FEBS Lett. 2008 Jul 23;582(17):2577-82. doi: 10.1016/j.febslet.2008.06.029. Epub 2008 Jun 26.

45.

A polyadenylation factor subunit implicated in regulating oxidative signaling in Arabidopsis thaliana.

Zhang J, Addepalli B, Yun KY, Hunt AG, Xu R, Rao S, Li QQ, Falcone DL.

PLoS One. 2008 Jun 11;3(6):e2410. doi: 10.1371/journal.pone.0002410.

46.

Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling.

Hunt AG, Xu R, Addepalli B, Rao S, Forbes KP, Meeks LR, Xing D, Mo M, Zhao H, Bandyopadhyay A, Dampanaboina L, Marion A, Von Lanken C, Li QQ.

BMC Genomics. 2008 May 14;9:220. doi: 10.1186/1471-2164-9-220.

47.

Redox and heavy metal effects on the biochemical activities of an Arabidopsis polyadenylation factor subunit.

Addepalli B, Hunt AG.

Arch Biochem Biophys. 2008 May 1;473(1):88-95. doi: 10.1016/j.abb.2008.02.027. Epub 2008 Mar 4.

PMID:
18331819
50.

Disease resistance in plants that carry a feedback-regulated yeast poly(A) binding protein gene.

Addepalli B, Xu R, Dattaroy T, Li B, Bass WT, Li QQ, Hunt AG.

Plant Mol Biol. 2006 Jun;61(3):383-97.

PMID:
16830175

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