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Items: 32

1.

Diagnostic kit for rice blight resistance.

Eom JS, Luo D, Atienza-Grande G, Yang J, Ji C, Thi Luu V, Huguet-Tapia JC, Char SN, Liu B, Nguyen H, Schmidt SM, Szurek B, Vera Cruz C, White FF, Oliva R, Yang B, Frommer WB.

Nat Biotechnol. 2019 Nov;37(11):1372-1379. doi: 10.1038/s41587-019-0268-y. Epub 2019 Oct 28.

2.

Broad-spectrum resistance to bacterial blight in rice using genome editing.

Oliva R, Ji C, Atienza-Grande G, Huguet-Tapia JC, Perez-Quintero A, Li T, Eom JS, Li C, Nguyen H, Liu B, Auguy F, Sciallano C, Luu VT, Dossa GS, Cunnac S, Schmidt SM, Slamet-Loedin IH, Vera Cruz C, Szurek B, Frommer WB, White FF, Yang B.

Nat Biotechnol. 2019 Nov;37(11):1344-1350. doi: 10.1038/s41587-019-0267-z. Epub 2019 Oct 28.

3.

Xanthomonas translucens commandeers the host rate-limiting step in ABA biosynthesis for disease susceptibility.

Peng Z, Hu Y, Zhang J, Huguet-Tapia JC, Block AK, Park S, Sapkota S, Liu Z, Liu S, White FF.

Proc Natl Acad Sci U S A. 2019 Oct 15;116(42):20938-20946. doi: 10.1073/pnas.1911660116. Epub 2019 Oct 1.

4.

Genome Sequence Data of Six Isolates of Phytophthora capsici from Mexico.

Reyes-Tena A, Huguet-Tapia JC, Lamour KH, Goss EM, Rodríguez-Alvarado G, Vázquez-Marrufo G, Santillán-Mendoza R, Fernández-Pavía SP.

Mol Plant Microbe Interact. 2019 Oct;32(10):1267-1269. doi: 10.1094/MPMI-01-19-0014-A. Epub 2019 Aug 19.

PMID:
31425006
5.

An efficient method to clone TAL effector genes from Xanthomonas oryzae using Gibson assembly.

Li C, Ji C, Huguet-Tapia JC, White FF, Dong H, Yang B.

Mol Plant Pathol. 2019 Oct;20(10):1453-1462. doi: 10.1111/mpp.12820. Epub 2019 Aug 15.

6.

Corrigendum: Inference of Convergent Gene Acquisition Among Pseudomonas syringae Strains Isolated From Watermelon, Cantaloupe, and Squash.

Newberry EA, Ebrahim M, Timilsina S, Zlatković N, Obradović A, Bull CT, Goss EM, Huguet-Tapia JC, Paret ML, Jones JB, Potnis N.

Front Microbiol. 2019 May 3;10:963. doi: 10.3389/fmicb.2019.00963. eCollection 2019.

7.

A Long Non-Coding RNA of Citrus tristeza virus: Role in the Virus Interplay with the Host Immunity.

Kang SH, Sun YD, Atallah OO, Huguet-Tapia JC, Noble JD, Folimonova SY.

Viruses. 2019 May 14;11(5). pii: E436. doi: 10.3390/v11050436.

8.

Inference of Convergent Gene Acquisition Among Pseudomonas syringae Strains Isolated From Watermelon, Cantaloupe, and Squash.

Newberry EA, Ebrahim M, Timilsina S, Zlatković N, Obradović A, Bull CT, Goss EM, Huguet-Tapia JC, Paret ML, Jones JB, Potnis N.

Front Microbiol. 2019 Feb 19;10:270. doi: 10.3389/fmicb.2019.00270. eCollection 2019. Erratum in: Front Microbiol. 2019 May 03;10:963.

9.

Penicillin Trunk Injection Affects Bacterial Community Structure in Citrus Trees.

Ascunce MS, Shin K, Huguet-Tapia JC, Poudel R, Garrett KA, van Bruggen AHC, Goss EM.

Microb Ecol. 2019 Aug;78(2):457-469. doi: 10.1007/s00248-018-1302-1. Epub 2018 Dec 1.

PMID:
30506480
10.

Isolation and structural characterization of a non-diketopiperazine phytotoxin from a potato pathogenic Streptomyces strain.

Lapaz MI, López A, Huguet-Tapia JC, Pérez-Baldassari MF, Iglesias C, Loria R, Moyna G, Pianzzola MJ.

Nat Prod Res. 2019 Oct;33(20):2951-2957. doi: 10.1080/14786419.2018.1511554. Epub 2018 Oct 10.

PMID:
30304960
11.

Feather mites play a role in cleaning host feathers: New insights from DNA metabarcoding and microscopy.

Doña J, Proctor H, Serrano D, Johnson KP, Oploo AO, Huguet-Tapia JC, Ascunce MS, Jovani R.

Mol Ecol. 2019 Jan;28(2):203-218. doi: 10.1111/mec.14581. Epub 2018 May 3.

12.

Draft Genome Sequence of Methylobacterium sp. Strain V23, Isolated from Accretion Ice of the Antarctic Subglacial Lake Vostok.

Sapp A, Huguet-Tapia JC, Sánchez-Lamas M, Antelo GT, Primo ED, Rinaldi J, Klinke S, Goldbaum FA, Bonomi HR, Christner BC, Otero LH.

Genome Announc. 2018 Mar 8;6(10). pii: e00145-18. doi: 10.1128/genomeA.00145-18.

13.

Pacbio sequencing of copper-tolerant Xanthomonas citri reveals presence of a chimeric plasmid structure and provides insights into reassortment and shuffling of transcription activator-like effectors among X. citri strains.

Gochez AM, Huguet-Tapia JC, Minsavage GV, Shantaraj D, Jalan N, Strauß A, Lahaye T, Wang N, Canteros BI, Jones JB, Potnis N.

BMC Genomics. 2018 Jan 4;19(1):16. doi: 10.1186/s12864-017-4408-9.

14.

Comparative Genomics of Ralstonia solanacearum Identifies Candidate Genes Associated with Cool Virulence.

Bocsanczy AM, Huguet-Tapia JC, Norman DJ.

Front Plant Sci. 2017 Sep 13;8:1565. doi: 10.3389/fpls.2017.01565. eCollection 2017.

15.

Genotypic and Phenotypic Characterization of Streptomyces Species Causing Potato Common Scab in Uruguay.

Lapaz MI, Huguet-Tapia JC, Siri MI, Verdier E, Loria R, Pianzzola MJ.

Plant Dis. 2017 Aug;101(8):1362-1372. doi: 10.1094/PDIS-09-16-1348-RE. Epub 2017 May 24.

PMID:
30678602
16.

Phylogenomic analysis supports multiple instances of polyphyly in the oomycete peronosporalean lineage.

Ascunce MS, Huguet-Tapia JC, Ortiz-Urquiza A, Keyhani NO, Braun EL, Goss EM.

Mol Phylogenet Evol. 2017 Sep;114:199-211. doi: 10.1016/j.ympev.2017.06.013. Epub 2017 Jun 20.

PMID:
28645766
17.

Promiscuous Pathogenicity Islands and Phylogeny of Pathogenic Streptomyces spp.

Zhang Y, Bignell DR, Zuo R, Fan Q, Huguet-Tapia JC, Ding Y, Loria R.

Mol Plant Microbe Interact. 2016 Aug;29(8):640-50. doi: 10.1094/MPMI-04-16-0068-R. Epub 2016 Aug 9.

18.

Mating Type and Simple Sequence Repeat Markers Indicate a Clonal Population of Phyllosticta citricarpa in Florida.

Wang NY, Zhang K, Huguet-Tapia JC, Rollins JA, Dewdney MM.

Phytopathology. 2016 Nov;106(11):1300-1310. Epub 2016 Jul 26.

19.

Homologues of CsLOB1 in citrus function as disease susceptibility genes in citrus canker.

Zhang J, Huguet-Tapia JC, Hu Y, Jones J, Wang N, Liu S, White FF.

Mol Plant Pathol. 2017 Aug;18(6):798-810. doi: 10.1111/mpp.12441. Epub 2016 Aug 11.

20.

Whole genome sequence of the emerging oomycete pathogen Pythium insidiosum strain CDC-B5653 isolated from an infected human in the USA.

Ascunce MS, Huguet-Tapia JC, Braun EL, Ortiz-Urquiza A, Keyhani NO, Goss EM.

Genom Data. 2015 Nov 23;7:60-1. doi: 10.1016/j.gdata.2015.11.019. eCollection 2016 Mar.

21.

Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae.

Huguet-Tapia JC, Peng Z, Yang B, Yin Z, Liu S, White FF.

Genome Announc. 2016 Feb 11;4(1). pii: e01730-15. doi: 10.1128/genomeA.01730-15.

22.

Genome Content and Phylogenomics Reveal both Ancestral and Lateral Evolutionary Pathways in Plant-Pathogenic Streptomyces Species.

Huguet-Tapia JC, Lefebure T, Badger JH, Guan D, Pettis GS, Stanhope MJ, Loria R.

Appl Environ Microbiol. 2016 Jan 29;82(7):2146-2155. doi: 10.1128/AEM.03504-15.

23.

An artificial self-sufficient cytochrome P450 directly nitrates fluorinated tryptophan analogs with a different regio-selectivity.

Zuo R, Zhang Y, Huguet-Tapia JC, Mehta M, Dedic E, Bruner SD, Loria R, Ding Y.

Biotechnol J. 2016 May;11(5):624-32. doi: 10.1002/biot.201500416. Epub 2016 Feb 4.

PMID:
26743860
24.

Characterization of the integration and modular excision of the integrative conjugative element PAISt in Streptomyces turgidiscabies Car8.

Huguet-Tapia JC, Bignell DR, Loria R.

PLoS One. 2014 Jun 13;9(6):e99345. doi: 10.1371/journal.pone.0099345. eCollection 2014. Erratum in: PLoS One. 2015;10(4):e0121152.

25.

Whole-Genome Sequence of Ralstonia solanacearum P673, a Strain Capable of Infecting Tomato Plants at Low Temperatures.

Bocsanczy AM, Huguet-Tapia JC, Norman DJ.

Genome Announc. 2014 Feb 20;2(1). pii: e00106-14. doi: 10.1128/genomeA.00106-14.

26.

Draft genome sequence of Streptomyces acidiscabies 84-104, an emergent plant pathogen.

Huguet-Tapia JC, Loria R.

J Bacteriol. 2012 Apr;194(7):1847. doi: 10.1128/JB.06767-11.

27.

Streptomyces turgidiscabies Car8 contains a modular pathogenicity island that shares virulence genes with other actinobacterial plant pathogens.

Huguet-Tapia JC, Badger JH, Loria R, Pettis GS.

Plasmid. 2011 Mar;65(2):118-24. doi: 10.1016/j.plasmid.2010.11.002. Epub 2010 Nov 16.

PMID:
21087627
28.

What does it take to be a plant pathogen: genomic insights from Streptomyces species.

Bignell DR, Huguet-Tapia JC, Joshi MV, Pettis GS, Loria R.

Antonie Van Leeuwenhoek. 2010 Aug;98(2):179-94. doi: 10.1007/s10482-010-9429-1. Epub 2010 Apr 17. Review.

PMID:
20396949
29.

Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions.

Bignell DR, Seipke RF, Huguet-Tapia JC, Chambers AH, Parry RJ, Loria R.

Mol Plant Microbe Interact. 2010 Feb;23(2):161-75. doi: 10.1094/MPMI-23-2-0161.

30.

Tn917 targets the region where DNA replication terminates in Bacillus subtilis, highlighting a difference in chromosome processing in the firmicutes.

Shi Q, Huguet-Tapia JC, Peters JE.

J Bacteriol. 2009 Dec;191(24):7623-7. doi: 10.1128/JB.01023-09. Epub 2009 Oct 9.

31.

Thaxtomin biosynthesis: the path to plant pathogenicity in the genus Streptomyces.

Loria R, Bignell DR, Moll S, Huguet-Tapia JC, Joshi MV, Johnson EG, Seipke RF, Gibson DM.

Antonie Van Leeuwenhoek. 2008 Jun;94(1):3-10. doi: 10.1007/s10482-008-9240-4. Epub 2008 Apr 5.

PMID:
18392685
32.

Construction of an Enterococcus faecalis Tn917-mediated-gene-disruption library offers insight into Tn917 insertion patterns.

Garsin DA, Urbach J, Huguet-Tapia JC, Peters JE, Ausubel FM.

J Bacteriol. 2004 Nov;186(21):7280-9.

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