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Items: 1 to 50 of 56

1.

Sulfur-Oxidizing Symbionts without Canonical Genes for Autotrophic CO2 Fixation.

Seah BKB, Antony CP, Huettel B, Zarzycki J, Schada von Borzyskowski L, Erb TJ, Kouris A, Kleiner M, Liebeke M, Dubilier N, Gruber-Vodicka HR.

MBio. 2019 Jun 25;10(3). pii: e01112-19. doi: 10.1128/mBio.01112-19.

2.

A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set.

Pucker B, Holtgräwe D, Stadermann KB, Frey K, Huettel B, Reinhardt R, Weisshaar B.

PLoS One. 2019 May 21;14(5):e0216233. doi: 10.1371/journal.pone.0216233. eCollection 2019.

3.

Development of ten microsatellite markers for Alibertia edulis (Rubiaceae), a Brazilian savanna tree species.

Dantas LG, Alencar L, Huettel B, Pedrosa-Harand A.

Mol Biol Rep. 2019 Aug;46(4):4593-4597. doi: 10.1007/s11033-019-04819-2. Epub 2019 Apr 30.

PMID:
31041674
4.

Development and characterization of eleven microsatellite loci for the tropical understory tree Paypayrola blanchetiana Tul. (Violaceae).

Braun M, Esposito T, Huettel B, Harand AP.

Mol Biol Rep. 2019 Apr;46(2):2529-2532. doi: 10.1007/s11033-019-04622-z. Epub 2019 Jan 28.

PMID:
30689185
5.

Global impacts of chromosomal imbalance on gene expression in Arabidopsis and other taxa.

Hou J, Shi X, Chen C, Islam MS, Johnson AF, Kanno T, Huettel B, Yen MR, Hsu FM, Ji T, Chen PY, Matzke M, Matzke AJM, Cheng J, Birchler JA.

Proc Natl Acad Sci U S A. 2018 Nov 27;115(48):E11321-E11330. doi: 10.1073/pnas.1807796115. Epub 2018 Nov 14.

6.

Development of 15 nuclear microsatellite markers in Deuterocohnia (Pitcairnioideae; Bromeliaceae) using 454 pyrosequencing.

Zenk FL, Firmer C, Wöhrmann T, da Silva LV, Weising K, Huettel B, Paggi GM.

Appl Plant Sci. 2018 May 8;6(4):e1147. doi: 10.1002/aps3.1147. eCollection 2018 Apr.

7.

Aberrant imprinting may underlie evolution of parthenogenesis.

Kirioukhova O, Shah JN, Larsen DS, Tayyab M, Mueller NE, Govind G, Baroux C, Federer M, Gheyselinck J, Barrell PJ, Ma H, Sprunck S, Huettel B, Wallace H, Grossniklaus U, Johnston AJ.

Sci Rep. 2018 Jul 13;8(1):10626. doi: 10.1038/s41598-018-27863-7.

8.

Fern genomes elucidate land plant evolution and cyanobacterial symbioses.

Li FW, Brouwer P, Carretero-Paulet L, Cheng S, de Vries J, Delaux PM, Eily A, Koppers N, Kuo LY, Li Z, Simenc M, Small I, Wafula E, Angarita S, Barker MS, Bräutigam A, dePamphilis C, Gould S, Hosmani PS, Huang YM, Huettel B, Kato Y, Liu X, Maere S, McDowell R, Mueller LA, Nierop KGJ, Rensing SA, Robison T, Rothfels CJ, Sigel EM, Song Y, Timilsena PR, Van de Peer Y, Wang H, Wilhelmsson PKI, Wolf PG, Xu X, Der JP, Schluepmann H, Wong GK, Pryer KM.

Nat Plants. 2018 Jul;4(7):460-472. doi: 10.1038/s41477-018-0188-8. Epub 2018 Jul 2.

PMID:
29967517
9.

Single molecule real time sequencing in ADTKD-MUC1 allows complete assembly of the VNTR and exact positioning of causative mutations.

Wenzel A, Altmueller J, Ekici AB, Popp B, Stueber K, Thiele H, Pannes A, Staubach S, Salido E, Nuernberg P, Reinhardt R, Reis A, Rump P, Hanisch FG, Wolf MTF, Wiesener M, Huettel B, Beck BB.

Sci Rep. 2018 Mar 8;8(1):4170. doi: 10.1038/s41598-018-22428-0.

10.

Identification of the DNA methyltransferases establishing the methylome of the cyanobacterium Synechocystis sp. PCC 6803.

Hagemann M, Gärtner K, Scharnagl M, Bolay P, Lott SC, Fuss J, Huettel B, Reinhardt R, Klähn S, Hess WR.

DNA Res. 2018 Aug 1;25(4):343-352. doi: 10.1093/dnares/dsy006.

11.

Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise.

Hou S, López-Pérez M, Pfreundt U, Belkin N, Stüber K, Huettel B, Reinhardt R, Berman-Frank I, Rodriguez-Valera F, Hess WR.

ISME J. 2018 Apr;12(4):981-996. doi: 10.1038/s41396-017-0034-4. Epub 2018 Jan 15.

12.

Flowering Time Gene Variation in Brassica Species Shows Evolutionary Principles.

Schiessl SV, Huettel B, Kuehn D, Reinhardt R, Snowdon RJ.

Front Plant Sci. 2017 Oct 17;8:1742. doi: 10.3389/fpls.2017.01742. eCollection 2017.

13.

Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify.

Dijkhuizen LW, Brouwer P, Bolhuis H, Reichart GJ, Koppers N, Huettel B, Bolger AM, Li FW, Cheng S, Liu X, Wong GK, Pryer K, Weber A, Bräutigam A, Schluepmann H.

New Phytol. 2018 Jan;217(1):453-466. doi: 10.1111/nph.14843. Epub 2017 Oct 30.

14.

Specificity in diversity: single origin of a widespread ciliate-bacteria symbiosis.

Seah BKB, Schwaha T, Volland JM, Huettel B, Dubilier N, Gruber-Vodicka HR.

Proc Biol Sci. 2017 Jul 12;284(1858). pii: 20170764. doi: 10.1098/rspb.2017.0764.

15.

Targeted deep sequencing of flowering regulators in Brassica napus reveals extensive copy number variation.

Schiessl S, Huettel B, Kuehn D, Reinhardt R, Snowdon RJ.

Sci Data. 2017 Mar 14;4:170013. doi: 10.1038/sdata.2017.13.

16.

Post-polyploidisation morphotype diversification associates with gene copy number variation.

Schiessl S, Huettel B, Kuehn D, Reinhardt R, Snowdon R.

Sci Rep. 2017 Feb 6;7:41845. doi: 10.1038/srep41845.

17.

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data.

Jiao WB, Accinelli GG, Hartwig B, Kiefer C, Baker D, Severing E, Willing EM, Piednoel M, Woetzel S, Madrid-Herrero E, Huettel B, Hümann U, Reinhard R, Koch MA, Swan D, Clavijo B, Coupland G, Schneeberger K.

Genome Res. 2017 May;27(5):778-786. doi: 10.1101/gr.213652.116. Epub 2017 Feb 3.

18.

Staphylococcus aureus Exploits a Non-ribosomal Cyclic Dipeptide to Modulate Survival within Epithelial Cells and Phagocytes.

Blättner S, Das S, Paprotka K, Eilers U, Krischke M, Kretschmer D, Remmele CW, Dittrich M, Müller T, Schuelein-Voelk C, Hertlein T, Mueller MJ, Huettel B, Reinhardt R, Ohlsen K, Rudel T, Fraunholz MJ.

PLoS Pathog. 2016 Sep 15;12(9):e1005857. doi: 10.1371/journal.ppat.1005857. eCollection 2016 Sep.

19.

cDNA Library Enrichment of Full Length Transcripts for SMRT Long Read Sequencing.

Cartolano M, Huettel B, Hartwig B, Reinhardt R, Schneeberger K.

PLoS One. 2016 Jun 21;11(6):e0157779. doi: 10.1371/journal.pone.0157779. eCollection 2016.

20.

Correction: Methylation Markers for the Identification of Body Fluids and Tissues from Forensic Trace Evidence.

Forat S, Huettel B, Reinhardt R, Fimmers R, Haidl G, Denschlag D, Olek K.

PLoS One. 2016 May 24;11(5):e0156472. doi: 10.1371/journal.pone.0156472. eCollection 2016.

21.

Transcriptomic profiling of Arabidopsis gene expression in response to varying micronutrient zinc supply.

Azevedo H, Azinheiro SG, Muñoz-Mérida A, Castro PH, Huettel B, Aarts MG, Assunção AG.

Genom Data. 2016 Feb 1;7:256-8. doi: 10.1016/j.gdata.2016.01.021. eCollection 2016 Mar.

22.

Methylation Markers for the Identification of Body Fluids and Tissues from Forensic Trace Evidence.

Forat S, Huettel B, Reinhardt R, Fimmers R, Haidl G, Denschlag D, Olek K.

PLoS One. 2016 Feb 1;11(2):e0147973. doi: 10.1371/journal.pone.0147973. eCollection 2016. Erratum in: PLoS One. 2016;11(5):e0156472.

23.

Microsatellites from Fosterella christophii (Bromeliaceae) by de novo transcriptome sequencing on the Pacific Biosciences RS platform.

Wöhrmann T, Huettel B, Wagner N, Weising K.

Appl Plant Sci. 2016 Jan 7;4(1). pii: apps.1500084. doi: 10.3732/apps.1500084. eCollection 2016 Jan.

24.

SWP73 Subunits of Arabidopsis SWI/SNF Chromatin Remodeling Complexes Play Distinct Roles in Leaf and Flower Development.

Sacharowski SP, Gratkowska DM, Sarnowska EA, Kondrak P, Jancewicz I, Porri A, Bucior E, Rolicka AT, Franzen R, Kowalczyk J, Pawlikowska K, Huettel B, Torti S, Schmelzer E, Coupland G, Jerzmanowski A, Koncz C, Sarnowski TJ.

Plant Cell. 2015 Jul;27(7):1889-906. doi: 10.1105/tpc.15.00233. Epub 2015 Jun 23.

25.

Development of 18 polymorphic microsatellite markers for Vinca minor (Apocynaceae) via 454 pyrosequencing.

Moeller S, Wöhrmann T, Huettel B, Weising K.

Appl Plant Sci. 2015 May 11;3(5). pii: apps.1500015. doi: 10.3732/apps.1500015. eCollection 2015 May.

26.

The GI-CDF module of Arabidopsis affects freezing tolerance and growth as well as flowering.

Fornara F, de Montaigu A, Sánchez-Villarreal A, Takahashi Y, Ver Loren van Themaat E, Huettel B, Davis SJ, Coupland G.

Plant J. 2015 Mar;81(5):695-706. doi: 10.1111/tpj.12759.

27.

Complete genome determination and analysis of Acholeplasma oculi strain 19L, highlighting the loss of basic genetic features in the Acholeplasmataceae.

Siewert C, Hess WR, Duduk B, Huettel B, Reinhardt R, Büttner C, Kube M.

BMC Genomics. 2014 Oct 24;15:931. doi: 10.1186/1471-2164-15-931.

28.

On the current status of Phakopsora pachyrhizi genome sequencing.

Loehrer M, Vogel A, Huettel B, Reinhardt R, Benes V, Duplessis S, Usadel B, Schaffrath U.

Front Plant Sci. 2014 Aug 27;5:377. doi: 10.3389/fpls.2014.00377. eCollection 2014.

29.

Finished Genome Sequence of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC 6714.

Kopf M, Klähn S, Voss B, Stüber K, Huettel B, Reinhardt R, Hess WR.

Genome Announc. 2014 Jul 31;2(4). pii: e00757-14. doi: 10.1128/genomeA.00757-14.

30.

The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana.

Wijnker E, Velikkakam James G, Ding J, Becker F, Klasen JR, Rawat V, Rowan BA, de Jong DF, de Snoo CB, Zapata L, Huettel B, de Jong H, Ossowski S, Weigel D, Koornneef M, Keurentjes JJ, Schneeberger K.

Elife. 2013 Dec 17;2:e01426. doi: 10.7554/eLife.01426.

31.

Ups and downs of a transcriptional landscape shape iron deficiency associated chlorosis of the maize inbreds B73 and Mo17.

Urbany C, Benke A, Marsian J, Huettel B, Reinhardt R, Stich B.

BMC Plant Biol. 2013 Dec 13;13:213. doi: 10.1186/1471-2229-13-213.

32.

Trait-directed de novo population transcriptome dissects genetic regulation of a balanced polymorphism in phosphorus nutrition/arsenate tolerance in a wild grass, Holcus lanatus.

Meharg C, Khan B, Norton G, Deacon C, Johnson D, Reinhardt R, Huettel B, Meharg AA.

New Phytol. 2014 Jan;201(1):144-54. doi: 10.1111/nph.12491. Epub 2013 Sep 18.

33.

The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides.

Mann AJ, Hahnke RL, Huang S, Werner J, Xing P, Barbeyron T, Huettel B, Stüber K, Reinhardt R, Harder J, Glöckner FO, Amann RI, Teeling H.

Appl Environ Microbiol. 2013 Nov;79(21):6813-22. doi: 10.1128/AEM.01937-13. Epub 2013 Aug 30.

34.

A set of plastid microsatellite loci for the genus Dyckia (Bromeliaceae) derived from 454 pyrosequencing.

Krapp F, Wöhrmann T, Pinangé DS, Benko-Iseppon AM, Huettel B, Weising K.

Am J Bot. 2012 Dec;99(12):e470-3. doi: 10.3732/ajb.1200153. Epub 2012 Nov 28.

35.

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota.

Bulgarelli D, Rott M, Schlaeppi K, Ver Loren van Themaat E, Ahmadinejad N, Assenza F, Rauf P, Huettel B, Reinhardt R, Schmelzer E, Peplies J, Gloeckner FO, Amann R, Eickhorst T, Schulze-Lefert P.

Nature. 2012 Aug 2;488(7409):91-5. doi: 10.1038/nature11336.

PMID:
22859207
36.

Spread of a distinct Stx2-encoding phage prototype among Escherichia coli O104:H4 strains from outbreaks in Germany, Norway, and Georgia.

Beutin L, Hammerl JA, Strauch E, Reetz J, Dieckmann R, Kelner-Burgos Y, Martin A, Miko A, Strockbine NA, Lindstedt BA, Horn D, Monse H, Huettel B, Müller I, Stüber K, Reinhardt R.

J Virol. 2012 Oct;86(19):10444-55. doi: 10.1128/JVI.00986-12. Epub 2012 Jul 18.

37.

High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing.

Bus A, Hecht J, Huettel B, Reinhardt R, Stich B.

BMC Genomics. 2012 Jun 24;13:281. doi: 10.1186/1471-2164-13-281.

38.

Development-related PcG target in the apex 4 controls leaf margin architecture in Arabidopsis thaliana.

Engelhorn J, Reimer JJ, Leuz I, Göbel U, Huettel B, Farrona S, Turck F.

Development. 2012 Jul;139(14):2566-75. doi: 10.1242/dev.078618. Epub 2012 Jun 6.

39.

CDKF;1 and CDKD protein kinases regulate phosphorylation of serine residues in the C-terminal domain of Arabidopsis RNA polymerase II.

Hajheidari M, Farrona S, Huettel B, Koncz Z, Koncz C.

Plant Cell. 2012 Apr;24(4):1626-42. doi: 10.1105/tpc.112.096834. Epub 2012 Apr 30.

40.

Plasma membrane calcium ATPases are important components of receptor-mediated signaling in plant immune responses and development.

Frei dit Frey N, Mbengue M, Kwaaitaal M, Nitsch L, Altenbach D, Häweker H, Lozano-Duran R, Njo MF, Beeckman T, Huettel B, Borst JW, Panstruga R, Robatzek S.

Plant Physiol. 2012 Jun;159(2):798-809. doi: 10.1104/pp.111.192575. Epub 2012 Apr 25.

41.

Development of microsatellite markers in Fosterella rusbyi (Bromeliaceae) using 454 pyrosequencing.

Wöhrmann T, Wagner N, Krapp F, Huettel B, Weising K.

Am J Bot. 2012 Apr;99(4):e160-3. doi: 10.3732/ajb.1100470. Epub 2012 Mar 23.

42.

Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency.

Assunção AG, Herrero E, Lin YF, Huettel B, Talukdar S, Smaczniak C, Immink RG, van Eldik M, Fiers M, Schat H, Aarts MG.

Proc Natl Acad Sci U S A. 2010 Jun 1;107(22):10296-301. doi: 10.1073/pnas.1004788107. Epub 2010 May 17.

43.

RNA-directed DNA methylation and plant development require an IWR1-type transcription factor.

Kanno T, Bucher E, Daxinger L, Huettel B, Kreil DP, Breinig F, Lind M, Schmitt MJ, Simon SA, Gurazada SG, Meyers BC, Lorkovic ZJ, Matzke AJ, Matzke M.

EMBO Rep. 2010 Jan;11(1):65-71. doi: 10.1038/embor.2009.246. Epub 2009 Dec 11.

44.

RNA-mediated chromatin-based silencing in plants.

Matzke M, Kanno T, Daxinger L, Huettel B, Matzke AJ.

Curr Opin Cell Biol. 2009 Jun;21(3):367-76. doi: 10.1016/j.ceb.2009.01.025. Epub 2009 Feb 23. Review.

PMID:
19243928
45.

Fluorescent transgenes to study interphase chromosomes in living plants.

Matzke AJ, Huettel B, van der Winden J, Matzke M.

Methods Mol Biol. 2008;463:241-65. doi: 10.1007/978-1-59745-406-3_16.

PMID:
18951172
46.

Effects of aneuploidy on genome structure, expression, and interphase organization in Arabidopsis thaliana.

Huettel B, Kreil DP, Matzke M, Matzke AJ.

PLoS Genet. 2008 Oct;4(10):e1000226. doi: 10.1371/journal.pgen.1000226. Epub 2008 Oct 17.

47.

A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation.

Kanno T, Bucher E, Daxinger L, Huettel B, Böhmdorfer G, Gregor W, Kreil DP, Matzke M, Matzke AJ.

Nat Genet. 2008 May;40(5):670-5. doi: 10.1038/ng.119. Epub 2008 Apr 20.

PMID:
18425128
48.

Targets of RNA-directed DNA methylation.

Matzke M, Kanno T, Huettel B, Daxinger L, Matzke AJ.

Curr Opin Plant Biol. 2007 Oct;10(5):512-9. Epub 2007 Aug 16. Review.

PMID:
17702644
49.

RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants.

Huettel B, Kanno T, Daxinger L, Bucher E, van der Winden J, Matzke AJ, Matzke M.

Biochim Biophys Acta. 2007 May-Jun;1769(5-6):358-74. Epub 2007 Mar 12. Review.

PMID:
17449119
50.

RNA-directed DNA methylation and Pol IVb in Arabidopsis.

Matzke M, Kanno T, Huettel B, Daxinger L, Matzke AJ.

Cold Spring Harb Symp Quant Biol. 2006;71:449-59. Review.

PMID:
17381327

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