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Genomic profiling of BCOR-rearranged uterine sarcomas reveals novel gene fusion partners, frequent CDK4 amplification and CDKN2A loss.

Lin DI, Hemmerich A, Edgerly C, Duncan D, Severson EA, Huang RSP, Ramkissoon SH, Connor YD, Shea M, Hecht JL, Ali SM, Vergilio JA, Ross JS, Elvin JA.

Gynecol Oncol. 2020 Mar 7. pii: S0090-8258(20)30160-8. doi: 10.1016/j.ygyno.2020.02.024. [Epub ahead of print]


Treatment of Pediatric Glioblastoma with Combination Olaparib and Temozolomide Demonstrates 2-Year Durable Response.

Valiakhmetova A, Gorelyshev S, Konovalov A, Trunin Y, Savateev A, Kram DE, Severson E, Hemmerich A, Edgerly C, Duncan D, Britt N, Huang RSP, Elvin J, Miller V, Ross JS, Gay L, McCorkle J, Rankin A, Erlich RL, Chudnovsky Y, Ramkissoon SH.

Oncologist. 2020 Feb;25(2):e198-e202. doi: 10.1634/theoncologist.2019-0603. Epub 2019 Oct 16.


MicroRNA targeting energy metabolism in ovarian cancer: a potent contender for future therapeutics.

Pareek S, Nath A, Huang RS.

Ann Transl Med. 2019 Dec;7(Suppl 8):S299. doi: 10.21037/atm.2019.11.15. No abstract available.


Emerging role of long non-coding RNAs in cancer precision medicine.

Nath A, Huang RS.

Mol Cell Oncol. 2019 Nov 10;7(1):1684130. doi: 10.1080/23723556.2019.1684130. eCollection 2020.


The Intent and Process of Immunohistochemistry Scoring Algorithm Development in a Predictive Medicine Era.

Huang RSP, ElGabry EE.

Ann Clin Lab Sci. 2019 Nov;49(6):835. No abstract available.


iMIRAGE: An R package to impute microRNA expression using protein-coding genes.

Nath A, Chang J, Huang RS.

Bioinformatics. 2019 Dec 20. pii: btz939. doi: 10.1093/bioinformatics/btz939. [Epub ahead of print]


Treatment of Pediatric Glioblastoma with Combination Olaparib and Temozolomide Demonstrates 2-Year Durable Response.

Valiakhmetova A, Gorelyshev S, Konovalov A, Trunin Y, Savateev A, Kram DE, Severson E, Hemmerich A, Edgerly C, Duncan D, Britt N, Huang RSP, Elvin J, Miller V, Ross JS, Gay L, McCorkle J, Rankin A, Erlich RL, Chudnovsky Y, Ramkissoon SH.

Oncologist. 2019 Oct 16. pii: theoncologist.2019-0603. doi: 10.1634/theoncologist.2019-0603. [Epub ahead of print] Review.


Discovering long noncoding RNA predictors of anticancer drug sensitivity beyond protein-coding genes.

Nath A, Lau EYT, Lee AM, Geeleher P, Cho WCS, Huang RS.

Proc Natl Acad Sci U S A. 2019 Oct 29;116(44):22020-22029. doi: 10.1073/pnas.1909998116. Epub 2019 Sep 23.


Correlation of ROS1 Immunohistochemistry With ROS1 Fusion Status Determined by Fluorescence In Situ Hybridization.

Huang RSP, Smith D, Le CH, Liu WW, Ordinario E, Manohar C, Lee M, Rajamani J, Truong H, Li J, Choi C, Li J, Pati A, Bubendorf L, Buettner R, Kerr KM, Lopez-Rios F, Marchetti A, Marondel I, Nicholson AG, Öz AB, Pauwels P, Penault-Llorca F, Rossi G, Thunnissen E, Newell AH, Pate G, Menzl I.

Arch Pathol Lab Med. 2019 Sep 11. doi: 10.5858/arpa.2019-0085-OA. [Epub ahead of print]


Delta-like Protein 3 Prevalence in Small Cell Lung Cancer and DLL3 (SP347) Assay Characteristics.

Huang RSP, Holmes BF, Powell C, Marati RV, Tyree D, Admire B, Streator A, Newell AEH, Perez J, Dalvi D, ElGabry EA.

Arch Pathol Lab Med. 2019 Nov;143(11):1373-1377. doi: 10.5858/arpa.2018-0497-OA. Epub 2019 Apr 8.


Novel Substituted Thiophenes and Sulf-Polyacetylene Ester from Echinops ritro L.

Li LB, Xiao GD, Xiang W, Yang X, Cao KX, Huang RS.

Molecules. 2019 Feb 22;24(4). pii: E805. doi: 10.3390/molecules24040805.


Long non-coding RNA transcriptome of uncharacterized samples can be accurately imputed using protein-coding genes.

Nath A, Geeleher P, Huang RS.

Brief Bioinform. 2019 Jan 17. doi: 10.1093/bib/bby129. [Epub ahead of print]


Pharmacogenomics of Medications Commonly Used in the Intensive Care Unit.

Zhou S, Skaar DJ, Jacobson PA, Huang RS.

Front Pharmacol. 2018 Dec 4;9:1436. doi: 10.3389/fphar.2018.01436. eCollection 2018. Review.


Unraveling the spatiotemporal brain dynamics during a simulated reach-to-eat task.

Chen CF, Kreutz-Delgado K, Sereno MI, Huang RS.

Neuroimage. 2019 Jan 15;185:58-71. doi: 10.1016/j.neuroimage.2018.10.028. Epub 2018 Oct 10.


Cancer-testis antigen GAGE-1 expression and serum immunoreactivity in hepatocellular carcinoma.

Chao NX, Li LZ, Luo GR, Zhong WG, Huang RS, Fan R, Zhao FL.

Niger J Clin Pract. 2018 Oct;21(10):1361-1367. doi: 10.4103/njcp.njcp_73_18.


More than fishing for a cure: The promises and pitfalls of high throughput cancer cell line screens.

Ling A, Gruener RF, Fessler J, Huang RS.

Pharmacol Ther. 2018 Nov;191:178-189. doi: 10.1016/j.pharmthera.2018.06.014. Epub 2018 Jun 25. Review.


Multisensory and sensorimotor maps.

Huang RS, Sereno MI.

Handb Clin Neurol. 2018;151:141-161. doi: 10.1016/B978-0-444-63622-5.00007-3. Review.


MicroRNA-485-5p suppresses growth and metastasis in non-small cell lung cancer cells by targeting IGF2BP2.

Huang RS, Zheng YL, Li C, Ding C, Xu C, Zhao J.

Life Sci. 2018 Apr 15;199:104-111. doi: 10.1016/j.lfs.2018.03.005. Epub 2018 Mar 3.


Spatiotemporal integration of looming visual and tactile stimuli near the face.

Huang RS, Chen CF, Sereno MI.

Hum Brain Mapp. 2018 May;39(5):2156-2176. doi: 10.1002/hbm.23995. Epub 2018 Feb 6.


Discovering drugs to overcome chemoresistance in ovarian cancers based on the cancer genome atlas tumor transcriptome profile.

Wang F, Chang JT, Zhang Z, Morrison G, Nath A, Bhutra S, Huang RS.

Oncotarget. 2017 Dec 4;8(70):115102-115113. doi: 10.18632/oncotarget.22870. eCollection 2017 Dec 29.


microRNA-381 suppresses the growth and increases cisplatin sensitivity in non-small cell lung cancer cells through inhibition of nuclear factor-κB signaling.

Huang RS, Zheng YL, Zhao J, Chun X.

Biomed Pharmacother. 2018 Feb;98:538-544. doi: 10.1016/j.biopha.2017.12.092. Epub 2017 Dec 27.


The preventive effects of edible folic acid on cardiomyocyte apoptosis and survival in early onset triple-transgenic Alzheimer's disease model mice.

Lin KH, Chiu CH, Kuo WW, Ju DT, Shen CY, Chen RJ, Lin CC, Viswanadha VP, Liu JS, Huang RS, Huang CY.

Environ Toxicol. 2018 Jan;33(1):83-92. doi: 10.1002/tox.22498. Epub 2017 Oct 25.


Mapping the complex topological organization of the human parietal face area.

Huang RS, Chen CF, Sereno MI.

Neuroimage. 2017 Dec;163:459-470. doi: 10.1016/j.neuroimage.2017.09.004. Epub 2017 Sep 6.


Effects of Cyclosporine A on the Development of Metanephros in the Pregnant BALB/c Mice.

Liao YJ, Huang RS, Lai WJ, Liu F, Ma L, Xie YS, Salerno S, Li Y, Fu P.

Chin Med J (Engl). 2017 Sep 20;130(18):2156-2162. doi: 10.4103/0366-6999.213971.


Discovering novel pharmacogenomic biomarkers by imputing drug response in cancer patients from large genomics studies.

Geeleher P, Zhang Z, Wang F, Gruener RF, Nath A, Morrison G, Bhutra S, Grossman RL, Huang RS.

Genome Res. 2017 Oct;27(10):1743-1751. doi: 10.1101/gr.221077.117. Epub 2017 Aug 28.


Pharmacological Inhibition of Macrophage Toll-like Receptor 4/Nuclear Factor-kappa B Alleviates Rhabdomyolysis-induced Acute Kidney Injury.

Huang RS, Zhou JJ, Feng YY, Shi M, Guo F, Gou SJ, Salerno S, Ma L, Fu P.

Chin Med J (Engl). 2017 Sep 20;130(18):2163-2169. doi: 10.4103/0366-6999.213406.


Low folate metabolic stress reprograms DNA methylation-activated sonic hedgehog signaling to mediate cancer stem cell-like signatures and invasive tumour stage-specific malignancy of human colorectal cancers.

Feng HC, Lin JY, Hsu SH, Lan WY, Kuo CS, Tian YF, Sun DP, Huang RS.

Int J Cancer. 2017 Dec 15;141(12):2537-2550. doi: 10.1002/ijc.31008. Epub 2017 Sep 23.


Emodin protects against oxidative stress and apoptosis in HK-2 renal tubular epithelial cells after hypoxia/reoxygenation.

Chen H, Huang RS, Yu XX, Ye Q, Pan LL, Shao GJ, Pan J.

Exp Ther Med. 2017 Jul;14(1):447-452. doi: 10.3892/etm.2017.4473. Epub 2017 May 18.


Study of Preanalytic and Analytic Variables for Clinical Next-Generation Sequencing of Circulating Cell-Free Nucleic Acid.

Mehrotra M, Singh RR, Chen W, Huang RSP, Almohammedsalim AA, Barkoh BA, Simien CM, Hernandez M, Behrens C, Patel KP, Routbort MJ, Broaddus RR, Medeiros LJ, Wistuba II, Kopetz S, Luthra R.

J Mol Diagn. 2017 Jul;19(4):514-524. doi: 10.1016/j.jmoldx.2017.03.003. Epub 2017 May 12.


The Promise of Pharmacogenomics in Reducing Toxicity During Acute Lymphoblastic Leukemia Maintenance Treatment.

Rudin S, Marable M, Huang RS.

Genomics Proteomics Bioinformatics. 2017 Apr;15(2):82-93. doi: 10.1016/j.gpb.2016.11.003. Epub 2017 Apr 6. Review.


Exploring the Link between the Germline and Somatic Genome in Cancer.

Geeleher P, Huang RS.

Cancer Discov. 2017 Apr;7(4):354-355. doi: 10.1158/2159-8290.CD-17-0192.


Endophytic fungi harbored in the root of Sophora tonkinensis Gapnep: Diversity and biocontrol potential against phytopathogens.

Yao YQ, Lan F, Qiao YM, Wei JG, Huang RS, Li LB.

Microbiologyopen. 2017 Jun;6(3). doi: 10.1002/mbo3.437. Epub 2017 Mar 15.


Institutional Profile: Pharmacogenomic research in R Stephanie Huang Laboratory.

Geeleher P, Nath A, Huang RS.

Pharmacogenomics. 2017 Apr;18(6):519-522. doi: 10.2217/pgs-2017-0031. Epub 2017 Mar 14.


Validation of periodic fMRI signals in response to wearable tactile stimulation.

Chen CF, Kreutz-Delgado K, Sereno MI, Huang RS.

Neuroimage. 2017 Apr 15;150:99-111. doi: 10.1016/j.neuroimage.2017.02.024. Epub 2017 Feb 11.


An Improved Drugs Screening System Reveals that Baicalein Ameliorates the Aβ/AMPA/NMDA-Induced Depolarization of Neurons.

Lin TS, Tsai HJ, Lee CH, Song YQ, Huang RS, Hsieh-Li HM, Liang MC, Lin Y.

J Alzheimers Dis. 2017;56(3):959-976. doi: 10.3233/JAD-160898.


Identification of MicroRNAs as Breast Cancer Prognosis Markers through the Cancer Genome Atlas.

Chang JT, Wang F, Chapin W, Huang RS.

PLoS One. 2016 Dec 13;11(12):e0168284. doi: 10.1371/journal.pone.0168284. eCollection 2016.


Consistency in large pharmacogenomic studies.

Geeleher P, Gamazon ER, Seoighe C, Cox NJ, Huang RS.

Nature. 2016 Nov 30;540(7631):E1-E2. doi: 10.1038/nature19838. No abstract available.


Performance of the Verigene® enteric pathogens test, Biofire FilmArray™ gastrointestinal panel and Luminex xTAG® gastrointestinal pathogen panel for detection of common enteric pathogens.

Huang RS, Johnson CL, Pritchard L, Hepler R, Ton TT, Dunn JJ.

Diagn Microbiol Infect Dis. 2016 Dec;86(4):336-339. doi: 10.1016/j.diagmicrobio.2016.09.013. Epub 2016 Sep 22.


Utility of patient-derived lymphoblastoid cell lines as an ex vivo capecitabine sensitivity prediction model for breast cancer patients.

Morrison G, Lenkala D, LaCroix B, Ziliak D, Abramson V, Morrow PK, Forero A, Van Poznak C, Rugo HS, Nanda R, O'Donnell PH, Huang RS.

Oncotarget. 2016 Jun 21;7(25):38359-38366. doi: 10.18632/oncotarget.9521.


Genetic diversity analyses of Lasiodiplodia theobromae on Morus alba and Agave sisalana based on RAPD and ISSR molecular markers.

Xie HH, Wei JG, Huang RS, Yang XB.

Mycology. 2016 Oct 11;7(4):155-164. doi: 10.1080/21501203.2016.1232762. eCollection 2016.


[Study on Output Frequency Stability for Optically Pumped THz Lasers].

Huang RS, Guo XY, Meng QL, Zhang B.

Guang Pu Xue Yu Guang Pu Fen Xi. 2016 Sep;36(9):2755-9. Chinese.


Lymphoblastoid Cell Lines as a Tool to Study Inter-Individual Differences in the Response to Glucose.

Grassi MA, Rao VR, Chen S, Cao D, Gao X, Cleary PA, Huang RS, Paterson AD, Natarajan R, Rehman J, Kern TS; DCCT/EDIC Research Group.

PLoS One. 2016 Aug 10;11(8):e0160504. doi: 10.1371/journal.pone.0160504. eCollection 2016.


Renoprotective Effect of the Combination of Renin-angiotensin System Inhibitor and Calcium Channel Blocker in Patients with Hypertension and Chronic Kidney Disease.

Huang RS, Cheng YM, Zeng XX, Kim S, Fu P.

Chin Med J (Engl). 2016 Mar 5;129(5):562-9. doi: 10.4103/0366-6999.176987.


High Expression of miR-532-5p, a Tumor Suppressor, Leads to Better Prognosis in Ovarian Cancer Both In Vivo and In Vitro.

Wang F, Chang JT, Kao CJ, Huang RS.

Mol Cancer Ther. 2016 May;15(5):1123-31. doi: 10.1158/1535-7163.MCT-15-0943. Epub 2016 Feb 12.


Molecular identification of Uncaria (Gouteng) through DNA barcoding.

Tang YL, Wu YS, Huang RS, Chao NX, Liu Y, Xu P, Li KZ, Cai DZ, Luo Y.

Chin Med. 2016 Feb 3;11:3. doi: 10.1186/s13020-015-0072-7. eCollection 2016.


The impact of the Cancer Genome Atlas on lung cancer.

Chang JT, Lee YM, Huang RS.

Transl Res. 2015 Dec;166(6):568-85. doi: 10.1016/j.trsl.2015.08.001. Epub 2015 Aug 10. Review.


Predicting Response to Histone Deacetylase Inhibitors Using High-Throughput Genomics.

Geeleher P, Loboda A, Lenkala D, Wang F, LaCroix B, Karovic S, Wang J, Nebozhyn M, Chisamore M, Hardwick J, Maitland ML, Huang RS.

J Natl Cancer Inst. 2015 Aug 21;107(11). pii: djv247. doi: 10.1093/jnci/djv247. Print 2015 Nov.

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