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The 2 faces of intentional self-inflicted injury: High in-hospital mortality, low postdischarge mortality, but high readmission rates.

Howe KL, Collier BR, Bath JL, Lagoy JC, Criss TW, Faulks ER, Lollar DI, Bower KL, Locklear TM, Matos MA, Nussbaum MS, Hamill ME.

Surgery. 2019 Jul 15. pii: S0039-6060(19)30304-6. doi: 10.1016/j.surg.2019.04.037. [Epub ahead of print]


Improving Post-Intubation Analgesia in the Emergency Department.

Howe K, Imhoff B, Wagner S.

Am J Med Qual. 2019 Jun 21:1062860619857813. doi: 10.1177/1062860619857813. [Epub ahead of print] No abstract available.


Autism-associated missense genetic variants impact locomotion and neurodevelopment in Caenorhabditis elegans.

Wong WR, Brugman KI, Maher S, Oh JY, Howe K, Kato M, Sternberg PW.

Hum Mol Genet. 2019 Jul 1;28(13):2271-2281. doi: 10.1093/hmg/ddz051.


A comparison of visual and semiquantitative analysis methods for planar cardiac 123I-MIBG scintigraphy in dementia with Lewy bodies.

Roberts G, Kane JPM, Lloyd JJ, Petrides GS, Howe K, O'Brien JT, Thomas AJ.

Nucl Med Commun. 2019 Jul;40(7):734-743. doi: 10.1097/MNM.0000000000001024.


Water transmission potential of Angiostrongylus cantonensis: Larval viability and effectiveness of rainwater catchment sediment filters.

Howe K, Kaluna L, Lozano A, Torres Fischer B, Tagami Y, McHugh R, Jarvi S.

PLoS One. 2019 Apr 25;14(4):e0209813. doi: 10.1371/journal.pone.0209813. eCollection 2019.


The Genome of C57BL/6J "Eve", the Mother of the Laboratory Mouse Genome Reference Strain.

Sarsani VK, Raghupathy N, Fiddes IT, Armstrong J, Thibaud-Nissen F, Zinder O, Bolisetty M, Howe K, Hinerfeld D, Ruan X, Rowe L, Barter M, Ananda G, Paten B, Weinstock GM, Churchill GA, Wiles MV, Schneider VA, Srivastava A, Reinholdt LG.

G3 (Bethesda). 2019 Jun 5;9(6):1795-1805. doi: 10.1534/g3.119.400071.


123I-FP-CIT striatal binding ratios do not decrease significantly with age in older adults.

Roberts G, Lloyd JJ, Petrides GS, Donaghy PC, Kane JPM, Durcan R, Lawley S, Howe K, Sims AJ, Taylor JP, O'Brien JT, Thomas AJ.

Ann Nucl Med. 2019 Jun;33(6):434-443. doi: 10.1007/s12149-019-01352-x. Epub 2019 Mar 21.


Immune regulation by glucocorticoids can be linked to cell type-dependent transcriptional responses.

Franco LM, Gadkari M, Howe KN, Sun J, Kardava L, Kumar P, Kumari S, Hu Z, Fraser IDC, Moir S, Tsang JS, Germain RN.

J Exp Med. 2019 Feb 4;216(2):384-406. doi: 10.1084/jem.20180595. Epub 2019 Jan 23.


Anomaly Detection for Resonant New Physics with Machine Learning.

Collins J, Howe K, Nachman B.

Phys Rev Lett. 2018 Dec 14;121(24):241803. doi: 10.1103/PhysRevLett.121.241803.


Mortality in People With Type 1 Diabetes, Severe Hypoglycemia, and Impaired Awareness of Hypoglycemia Referred for Islet Transplantation.

Lee MH, Ward GM, MacIsaac RJ, Howe K, Holmes-Walker DJ, Anderson P, Radford T, Coates PT, Kay TW, O'Connell PJ, Goodman DJ.

Transplant Direct. 2018 Oct 23;4(11):e401. doi: 10.1097/TXD.0000000000000841. eCollection 2018 Nov. No abstract available.


Transcript- and protein-level analyses of the response of human eosinophils to glucocorticoids.

Gadkari M, Makiya MA, Legrand F, Stokes K, Brown T, Howe K, Khoury P, Hu Z, Klion A, Franco LM.

Sci Data. 2018 Dec 4;5:180275. doi: 10.1038/sdata.2018.275.


Boron Can Be Used to Predict Trace Organic Rejection through Reverse Osmosis Membranes for Potable Reuse.

Breitner LN, Howe KJ, Minakata D.

Environ Sci Technol. 2018 Dec 4;52(23):13871-13878. doi: 10.1021/acs.est.8b03390. Epub 2018 Nov 16.


Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci.

Lilue J, Doran AG, Fiddes IT, Abrudan M, Armstrong J, Bennett R, Chow W, Collins J, Collins S, Czechanski A, Danecek P, Diekhans M, Dolle DD, Dunn M, Durbin R, Earl D, Ferguson-Smith A, Flicek P, Flint J, Frankish A, Fu B, Gerstein M, Gilbert J, Goodstadt L, Harrow J, Howe K, Ibarra-Soria X, Kolmogorov M, Lelliott CJ, Logan DW, Loveland J, Mathews CE, Mott R, Muir P, Nachtweide S, Navarro FCP, Odom DT, Park N, Pelan S, Pham SK, Quail M, Reinholdt L, Romoth L, Shirley L, Sisu C, Sjoberg-Herrera M, Stanke M, Steward C, Thomas M, Threadgold G, Thybert D, Torrance J, Wong K, Wood J, Yalcin B, Yang F, Adams DJ, Paten B, Keane TM.

Nat Genet. 2018 Nov;50(11):1574-1583. doi: 10.1038/s41588-018-0223-8. Epub 2018 Oct 1.


Partners under pressure: humanitarian action for the Syria crisis.

Howe K, Stites E.

Disasters. 2019 Jan;43(1):3-23. doi: 10.1111/disa.12298. Epub 2018 Sep 10.


Association between pre- and intraorbital soft tissue volumes and the risk of orbital blowout fractures using CT-based volumetric measurements.

Jacobs SM, Sharifi E, Wu L, Howe K, Le TP, Mitsumori L, Ching R, Jian-Amadi A.

Orbit. 2018 Aug 20:1-5. doi: 10.1080/01676830.2018.1509097. [Epub ahead of print]


Reducing Rat Lungworm Disease in Hawai'i Through a Collaborative Partnership With K-12 School Garden and Agriculture Projects.

Howe K, Bach J, DeCoito M, Frias S, Hatch R, Jarvi S.

Front Public Health. 2018 Jul 24;6:203. doi: 10.3389/fpubh.2018.00203. eCollection 2018.


Management of Lower Extremity Ischaemia During Type A Dissection Repair.

Howe KL, Harlock J, Parry D.

EJVES Short Rep. 2018 Jun 11;39:44-46. doi: 10.1016/j.ejvssr.2018.05.011. eCollection 2018.


Assessment of normal reference values for thyroid uptake of technetium-99m pertechnetate in a single centre UK population.

Macauley M, Shawgi M, Ali T, Curry A, Howe K, Howell E, Jefferson E, James A, Perros P, Petrides GS.

Nucl Med Commun. 2018 Sep;39(9):834-838. doi: 10.1097/MNM.0000000000000876.


Crystal structure of diaphorin methanol monosolvate isolated from Diaphorina citri Kuwayama, the insect vector of citrus greening disease.

Szebenyi DM, Kriksunov I, Howe KJ, Ramsey JS, Hall DG, Heck ML, Krasnoff SB.

Acta Crystallogr E Crystallogr Commun. 2018 Mar 2;74(Pt 4):445-449. doi: 10.1107/S2056989018002992. eCollection 2018 Apr 1.


Using WormBase ParaSite: An Integrated Platform for Exploring Helminth Genomic Data.

Bolt BJ, Rodgers FH, Shafie M, Kersey PJ, Berriman M, Howe KL.

Methods Mol Biol. 2018;1757:471-491. doi: 10.1007/978-1-4939-7737-6_15.


Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes.

Grove C, Cain S, Chen WJ, Davis P, Harris T, Howe KL, Kishore R, Lee R, Paulini M, Raciti D, Tuli MA, Van Auken K, Williams G; WormBase Consortium.

Methods Mol Biol. 2018;1757:399-470. doi: 10.1007/978-1-4939-7737-6_14.


Do psychopathic birds of a feather flock together? Psychopathic personality traits and romantic preferences.

Watts AL, Rohr JC, McCauley KL, Smith SF, Howe KL, Lilienfeld SO.

J Pers. 2019 Apr;87(2):341-362. doi: 10.1111/jopy.12394. Epub 2018 Aug 19.


Blunt innominate artery trauma requiring repair and carotid ligation.

Howe KL, Guirgis M, Woodman G, Victor Chu F, Cooper MJ, Rapanos T, Szalay D.

Trauma Case Rep. 2017 Oct 29;12:24-27. doi: 10.1016/j.tcr.2017.10.011. eCollection 2017 Dec.


Providing Level-of-Match Information to Perfectly Matched Unrelated Stem Cell Donors: Evaluating Acceptability and Potential Changes in Donor Availability.

Switzer GE, Macis M, Fabi R, Abress L, Confer D, Bruce J, Howe K, Fowler S, McNulty M, Pastorek G, Dew MA.

Biol Blood Marrow Transplant. 2018 Oct;24(10):2110-2118. doi: 10.1016/j.bbmt.2018.03.017. Epub 2018 Mar 21.


Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes.

Thybert D, Roller M, Navarro FCP, Fiddes I, Streeter I, Feig C, Martin-Galvez D, Kolmogorov M, Janoušek V, Akanni W, Aken B, Aldridge S, Chakrapani V, Chow W, Clarke L, Cummins C, Doran A, Dunn M, Goodstadt L, Howe K, Howell M, Josselin AA, Karn RC, Laukaitis CM, Jingtao L, Martin F, Muffato M, Nachtweide S, Quail MA, Sisu C, Stanke M, Stefflova K, Van Oosterhout C, Veyrunes F, Ward B, Yang F, Yazdanifar G, Zadissa A, Adams DJ, Brazma A, Gerstein M, Paten B, Pham S, Keane TM, Odom DT, Flicek P.

Genome Res. 2018 Apr;28(4):448-459. doi: 10.1101/gr.234096.117. Epub 2018 Mar 21.


Supercapacitive microbial desalination cells: New class of power generating devices for reduction of salinity content.

Santoro C, Abad FB, Serov A, Kodali M, Howe KJ, Soavi F, Atanassov P.

Appl Energy. 2017 Dec 15;208:25-36. doi: 10.1016/j.apenergy.2017.10.056.


High prevalence of Angiostrongylus cantonensis (rat lungworm) on eastern Hawai'i Island: A closer look at life cycle traits and patterns of infection in wild rats (Rattus spp.).

Jarvi SI, Quarta S, Jacquier S, Howe K, Bicakci D, Dasalla C, Lovesy N, Snook K, McHugh R, Niebuhr CN.

PLoS One. 2017 Dec 18;12(12):e0189458. doi: 10.1371/journal.pone.0189458. eCollection 2017.


Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species.

Kersey PJ, Allen JE, Allot A, Barba M, Boddu S, Bolt BJ, Carvalho-Silva D, Christensen M, Davis P, Grabmueller C, Kumar N, Liu Z, Maurel T, Moore B, McDowall MD, Maheswari U, Naamati G, Newman V, Ong CK, Paulini M, Pedro H, Perry E, Russell M, Sparrow H, Tapanari E, Taylor K, Vullo A, Williams G, Zadissia A, Olson A, Stein J, Wei S, Tello-Ruiz M, Ware D, Luciani A, Potter S, Finn RD, Urban M, Hammond-Kosack KE, Bolser DM, De Silva N, Howe KL, Langridge N, Maslen G, Staines DM, Yates A.

Nucleic Acids Res. 2018 Jan 4;46(D1):D802-D808. doi: 10.1093/nar/gkx1011.


WormBase 2017: molting into a new stage.

Lee RYN, Howe KL, Harris TW, Arnaboldi V, Cain S, Chan J, Chen WJ, Davis P, Gao S, Grove C, Kishore R, Muller HM, Nakamura C, Nuin P, Paulini M, Raciti D, Rodgers F, Russell M, Schindelman G, Tuli MA, Van Auken K, Wang Q, Williams G, Wright A, Yook K, Berriman M, Kersey P, Schedl T, Stein L, Sternberg PW.

Nucleic Acids Res. 2018 Jan 4;46(D1):D869-D874. doi: 10.1093/nar/gkx998.


The allocation of resources for animal health.

Howe KS.

Rev Sci Tech. 2017 Apr;36(1):35-48. doi: 10.20506/rst.36.1.2607. Review.


Angiostrongyliasis (Rat Lungworm Disease): Viewpoints from Hawai'i Island.

Howe K, Jarvi SI.

ACS Chem Neurosci. 2017 Sep 20;8(9):1820-1822. doi: 10.1021/acschemneuro.7b00299. Epub 2017 Aug 18.


Long-term and widespread changes in agricultural practices influence ring-necked pheasant abundance in California.

Coates PS, Brussee BE, Howe KB, Fleskes JP, Dwight IA, Connelly DP, Meshriy MG, Gardner SC.

Ecol Evol. 2017 Mar 15;7(8):2546-2559. doi: 10.1002/ece3.2675. eCollection 2017 Apr.


Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly.

Schneider VA, Graves-Lindsay T, Howe K, Bouk N, Chen HC, Kitts PA, Murphy TD, Pruitt KD, Thibaud-Nissen F, Albracht D, Fulton RS, Kremitzki M, Magrini V, Markovic C, McGrath S, Steinberg KM, Auger K, Chow W, Collins J, Harden G, Hubbard T, Pelan S, Simpson JT, Threadgold G, Torrance J, Wood JM, Clarke L, Koren S, Boitano M, Peluso P, Li H, Chin CS, Phillippy AM, Durbin R, Wilson RK, Flicek P, Eichler EE, Church DM.

Genome Res. 2017 May;27(5):849-864. doi: 10.1101/gr.213611.116. Epub 2017 Apr 10.


Supplemental invasion of Salmonella from the perspective of Salmonella enterica serovars Kentucky and Typhimurium.

Howe K, Salehi S, Hartford Bailey R, Brooks JP, Wills R, Lawrence ML, Karsi A.

BMC Microbiol. 2017 Apr 5;17(1):88. doi: 10.1186/s12866-017-0989-3.


Effects of Al3+ and La3+ Trivalent Metal Ions on Tomato Fruit Proteomes.

Sangireddy S, Okekeogbu I, Ye Z, Zhou S, Howe KJ, Fish T, Thannhauser TW.

Proteomes. 2017 Feb 11;5(1). pii: E7. doi: 10.3390/proteomes5010007.


Kemp Eliminase Activity of Ketosteroid Isomerase.

Lamba V, Sanchez E, Fanning LR, Howe K, Alvarez MA, Herschlag D, Forconi M.

Biochemistry. 2017 Jan 31;56(4):582-591. doi: 10.1021/acs.biochem.6b00762. Epub 2017 Jan 20.


Gotta catch'em all! Pokémon GO and physical activity among young adults: difference in differences study.

Howe KB, Suharlim C, Ueda P, Howe D, Kawachi I, Rimm EB.

BMJ. 2016 Dec 13;355:i6270. doi: 10.1136/bmj.i6270.


WormBase ParaSite - a comprehensive resource for helminth genomics.

Howe KL, Bolt BJ, Shafie M, Kersey P, Berriman M.

Mol Biochem Parasitol. 2017 Jul;215:2-10. doi: 10.1016/j.molbiopara.2016.11.005. Epub 2016 Nov 27.


A New Chicken Genome Assembly Provides Insight into Avian Genome Structure.

Warren WC, Hillier LW, Tomlinson C, Minx P, Kremitzki M, Graves T, Markovic C, Bouk N, Pruitt KD, Thibaud-Nissen F, Schneider V, Mansour TA, Brown CT, Zimin A, Hawken R, Abrahamsen M, Pyrkosz AB, Morisson M, Fillon V, Vignal A, Chow W, Howe K, Fulton JE, Miller MM, Lovell P, Mello CV, Wirthlin M, Mason AS, Kuo R, Burt DW, Dodgson JB, Cheng HH.

G3 (Bethesda). 2017 Jan 5;7(1):109-117. doi: 10.1534/g3.116.035923.


Health Equity, Social Justice, and HIV in Rhode Island: A Contemporary Challenge.

Bertrand T, Chan PA, Howe K, Comella J, Marak T, Bandy U.

R I Med J (2013). 2016 Nov 1;99(11):21-24. Review.


Salmonella enterica Serovar Kentucky Flagella Are Required for Broiler Skin Adhesion and Caco-2 Cell Invasion.

Salehi S, Howe K, Lawrence ML, Brooks JP, Bailey RH, Karsi A.

Appl Environ Microbiol. 2016 Dec 30;83(2). pii: e02115-16. doi: 10.1128/AEM.02115-16. Print 2017 Jan 15.


RNAcentral: a comprehensive database of non-coding RNA sequences.

The RNAcentral Consortium, Petrov AI, Kay SJE, Kalvari I, Howe KL, Gray KA, Bruford EA, Kersey PJ, Cochrane G, Finn RD, Bateman A, Kozomara A, Griffiths-Jones S, Frankish A, Zwieb CW, Lau BY, Williams KP, Chan PP, Lowe TM, Cannone JJ, Gutell R, Machnicka MA, Bujnicki JM, Yoshihama M, Kenmochi N, Chai B, Cole JR, Szymanski M, Karlowski WM, Wood V, Huala E, Berardini TZ, Zhao Y, Chen R, Zhu W, Paraskevopoulou MD, Vlachos IS, Hatzigeorgiou AG, Ma L, Zhang Z, Puetz J, Stadler PF, McDonald D, Basu S, Fey P, Engel SR, Cherry JM, Volders PJ, Mestdagh P, Wower J, Clark MB, Quek XC, Dinger ME.

Nucleic Acids Res. 2017 Jan 4;45(D1):D128-D134. doi: 10.1093/nar/gkw1008. Epub 2016 Oct 28.


Drought-Induced Leaf Proteome Changes in Switchgrass Seedlings.

Ye Z, Sangireddy S, Okekeogbu I, Zhou S, Yu CL, Hui D, Howe KJ, Fish T, Thannhauser TW.

Int J Mol Sci. 2016 Aug 2;17(8). pii: E1251. doi: 10.3390/ijms17081251.


Identification of Salmonella enterica serovar Kentucky genes involved in attachment to chicken skin.

Salehi S, Howe K, Brooks J, Lawrence ML, Bailey RH, Karsi A.

BMC Microbiol. 2016 Jul 29;16(1):168. doi: 10.1186/s12866-016-0781-9.


The Ensembl gene annotation system.

Aken BL, Ayling S, Barrell D, Clarke L, Curwen V, Fairley S, Fernandez Banet J, Billis K, García Girón C, Hourlier T, Howe K, Kähäri A, Kokocinski F, Martin FJ, Murphy DN, Nag R, Ruffier M, Schuster M, Tang YA, Vogel JH, White S, Zadissa A, Flicek P, Searle SM.

Database (Oxford). 2016 Jun 23;2016. pii: baw093. doi: 10.1093/database/baw093. Print 2016.


Inadequate Systems to Support Breast and Cervical Cancer Screening in Primary Care Practice.

Schapira MM, Sprague BL, Klabunde CN, Tosteson AN, Bitton A, Chen JS, Beaber EF, Onega T, MacLean CD, Harris K, Howe K, Pearson L, Feldman S, Brawarsky P, Haas JS; PROSPR consortium.

J Gen Intern Med. 2016 Oct;31(10):1148-55. doi: 10.1007/s11606-016-3726-y. Epub 2016 Jun 1.


Structure and evolutionary history of a large family of NLR proteins in the zebrafish.

Howe K, Schiffer PH, Zielinski J, Wiehe T, Laird GK, Marioni JC, Soylemez O, Kondrashov F, Leptin M.

Open Biol. 2016 Apr;6(4):160009. doi: 10.1098/rsob.160009. Epub 2016 Apr 27.


gEVAL - a web-based browser for evaluating genome assemblies.

Chow W, Brugger K, Caccamo M, Sealy I, Torrance J, Howe K.

Bioinformatics. 2016 Aug 15;32(16):2508-10. doi: 10.1093/bioinformatics/btw159. Epub 2016 Apr 7.

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