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Items: 15

1.

Human cytomegalovirus haplotype reconstruction reveals high diversity due to superinfection and evidence of within-host recombination.

Cudini J, Roy S, Houldcroft CJ, Bryant JM, Depledge DP, Tutill H, Veys P, Williams R, Worth AJJ, Tamuri AU, Goldstein RA, Breuer J.

Proc Natl Acad Sci U S A. 2019 Feb 28. pii: 201818130. doi: 10.1073/pnas.1818130116. [Epub ahead of print]

2.

Identification of novel adenovirus genotype 90 in children from Bangladesh.

Houldcroft CJ, Beale MA, Sayeed MA, Qadri F, Dougan G, Mutreja A.

Microb Genom. 2018 Oct;4(10). doi: 10.1099/mgen.0.000221. Epub 2018 Sep 24.

3.

High Viral Diversity and Mixed Infections in Cerebral Spinal Fluid From Cases of Varicella Zoster Virus Encephalitis.

Depledge DP, Cudini J, Kundu S, Atkinson C, Brown JR, Haque T, Houldcroft CJ, Koay ES, McGill F, Milne R, Whitfield T, Tang JW, Underhill G, Bergstrom T, Norberg P, Goldstein R, Solomon T, Breuer J.

J Infect Dis. 2018 Oct 5;218(10):1592-1601. doi: 10.1093/infdis/jiy358.

4.

The Role of aDNA in Understanding the Coevolutionary Patterns of Human Sexually Transmitted Infections.

Pimenoff VN, Houldcroft CJ, Rifkin RF, Underdown S.

Genes (Basel). 2018 Jun 25;9(7). pii: E317. doi: 10.3390/genes9070317. Review.

5.

Use of Whole-Genome Sequencing of Adenovirus in Immunocompromised Pediatric Patients to Identify Nosocomial Transmission and Mixed-Genotype Infection.

Houldcroft CJ, Roy S, Morfopoulou S, Margetts BK, Depledge DP, Cudini J, Shah D, Brown JR, Romero EY, Williams R, Cloutman-Green E, Rao K, Standing JF, Hartley JC, Breuer J.

J Infect Dis. 2018 Sep 8;218(8):1261-1271. doi: 10.1093/infdis/jiy323.

PMID:
29917114
6.

Migrating microbes: what pathogens can tell us about population movements and human evolution.

Houldcroft CJ, Ramond JB, Rifkin RF, Underdown SJ.

Ann Hum Biol. 2017 Aug;44(5):397-407. doi: 10.1080/03014460.2017.1325515. Epub 2017 May 16. Review.

PMID:
28511559
7.

Clinical and biological insights from viral genome sequencing.

Houldcroft CJ, Beale MA, Breuer J.

Nat Rev Microbiol. 2017 Mar;15(3):183-192. doi: 10.1038/nrmicro.2016.182. Epub 2017 Jan 16. Review.

PMID:
28090077
8.

Severe Epstein-Barr virus infection in primary immunodeficiency and the normal host.

Worth AJ, Houldcroft CJ, Booth C.

Br J Haematol. 2016 Nov;175(4):559-576. doi: 10.1111/bjh.14339. Epub 2016 Oct 17. Review.

PMID:
27748521
9.

Detection of Low Frequency Multi-Drug Resistance and Novel Putative Maribavir Resistance in Immunocompromised Pediatric Patients with Cytomegalovirus.

Houldcroft CJ, Bryant JM, Depledge DP, Margetts BK, Simmonds J, Nicolaou S, Tutill HJ, Williams R, Worth AJ, Marks SD, Veys P, Whittaker E, Breuer J.

Front Microbiol. 2016 Sep 9;7:1317. doi: 10.3389/fmicb.2016.01317. eCollection 2016.

10.

Neanderthal genomics suggests a pleistocene time frame for the first epidemiologic transition.

Houldcroft CJ, Underdown SJ.

Am J Phys Anthropol. 2016 Jul;160(3):379-88. doi: 10.1002/ajpa.22985. Epub 2016 Apr 10.

PMID:
27063929
11.

Tales from the crypt and coral reef: the successes and challenges of identifying new herpesviruses using metagenomics.

Houldcroft CJ, Breuer J.

Front Microbiol. 2015 Mar 13;6:188. doi: 10.3389/fmicb.2015.00188. eCollection 2015.

12.

Host genetics of Epstein-Barr virus infection, latency and disease.

Houldcroft CJ, Kellam P.

Rev Med Virol. 2015 Mar;25(2):71-84. doi: 10.1002/rmv.1816. Epub 2014 Nov 27. Review.

13.

Host genetic variants and gene expression patterns associated with Epstein-Barr virus copy number in lymphoblastoid cell lines.

Houldcroft CJ, Petrova V, Liu JZ, Frampton D, Anderson CA, Gall A, Kellam P.

PLoS One. 2014 Oct 7;9(10):e108384. doi: 10.1371/journal.pone.0108384. eCollection 2014.

14.

Genome watch: rabid about whole lyssa genomes.

Archer E, Houldcroft CJ.

Nat Rev Microbiol. 2014 May;12(5):316. No abstract available.

PMID:
24847553
15.

Disease-associated XMRV sequences are consistent with laboratory contamination.

Hué S, Gray ER, Gall A, Katzourakis A, Tan CP, Houldcroft CJ, McLaren S, Pillay D, Futreal A, Garson JA, Pybus OG, Kellam P, Towers GJ.

Retrovirology. 2010 Dec 20;7(1):111. doi: 10.1186/1742-4690-7-111.

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