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Items: 1 to 50 of 82

1.

Complete genome sequence of natural rubber-degrading, gram-negative bacterium, Rhizobacter gummiphilus strain NS21T.

Linh DV, Gibu N, Tabata M, Imai S, Hosoyama A, Yamazoe A, Kasai D, Fukuda M.

Biotechnol Rep (Amst). 2019 Apr 1;22:e00332. doi: 10.1016/j.btre.2019.e00332. eCollection 2019 Jun.

2.

Gene Mutations in Ganoderma lucidum During Long-Term Preservation by Repeated Subculturing.

Sakurai K, Yuasa M, Ohji S, Hosoyama A, Sato M, Fujita N, Kawasaki H.

Biopreserv Biobank. 2019 Apr 2. doi: 10.1089/bio.2018.0149. [Epub ahead of print]

PMID:
30938541
3.

An extracellular [NiFe] hydrogenase mediating iron corrosion is encoded in a genetically unstable genomic island in Methanococcus maripaludis.

Tsurumaru H, Ito N, Mori K, Wakai S, Uchiyama T, Iino T, Hosoyama A, Ataku H, Nishijima K, Mise M, Shimizu A, Harada T, Horikawa H, Ichikawa N, Sekigawa T, Jinno K, Tanikawa S, Yamazaki J, Sasaki K, Yamazaki S, Fujita N, Harayama S.

Sci Rep. 2018 Oct 11;8(1):15149. doi: 10.1038/s41598-018-33541-5.

4.

Linfuranones B and C, Furanone-Containing Polyketides from a Plant-Associated Sphaerimonospora mesophila.

Akiyama H, Indananda C, Thamchaipenet A, Motojima A, Oikawa T, Komaki H, Hosoyama A, Kimura A, Oku N, Igarashi Y.

J Nat Prod. 2018 Jul 27;81(7):1561-1569. doi: 10.1021/acs.jnatprod.8b00071. Epub 2018 Jun 25.

PMID:
29939741
5.

Diversity of nonribosomal peptide synthetase and polyketide synthase gene clusters among taxonomically close Streptomyces strains.

Komaki H, Sakurai K, Hosoyama A, Kimura A, Igarashi Y, Tamura T.

Sci Rep. 2018 May 2;8(1):6888. doi: 10.1038/s41598-018-24921-y.

6.

Reclassification of Nocardia species based on whole genome sequence and associated phenotypic data.

Tamura T, Ohji S, Ichikawa N, Hosoyama A, Yamazoe A, Hamada M, Komaki H, Shibata C, Matsuzawa T, Gonoi T, Suzuki KI, Fujita N.

J Antibiot (Tokyo). 2018 Jul;71(7):633-641. doi: 10.1038/s41429-018-0043-1. Epub 2018 Apr 4.

PMID:
29618770
7.

Draft genome sequence of Streptomyces hyaluromycini MB-PO13T, a hyaluromycin producer.

Harunari E, Komaki H, Ichikawa N, Hosoyama A, Kimura A, Hamada M, Igarashi Y.

Stand Genomic Sci. 2018 Jan 11;13:2. doi: 10.1186/s40793-017-0286-7. eCollection 2018.

8.

Comparative analysis of the intestinal flora in type 2 diabetes and nondiabetic mice.

Horie M, Miura T, Hirakata S, Hosoyama A, Sugino S, Umeno A, Murotomi K, Yoshida Y, Koike T.

Exp Anim. 2017 Oct 30;66(4):405-416. doi: 10.1538/expanim.17-0021. Epub 2017 Jul 12.

9.

Complete Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas putida KF715 (NBRC 110667) Isolated from Biphenyl-Contaminated Soil.

Suenaga H, Yamazoe A, Hosoyama A, Kimura N, Hirose J, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2017 Feb 16;5(7). pii: e01624-16. doi: 10.1128/genomeA.01624-16.

10.

Draft Genome Sequence of an Anicemycin Producer, Streptomyces sp. TP-A0648.

Komaki H, Hosoyama A, Kimura A, Ichikawa N, Igarashi Y.

Genome Announc. 2017 Jan 12;5(2). pii: e01468-16. doi: 10.1128/genomeA.01468-16.

11.

Phylogenetic analysis reveals the taxonomically diverse distribution of the Pseudomonas putida group.

Yonezuka K, Shimodaira J, Tabata M, Ohji S, Hosoyama A, Kasai D, Yamazoe A, Fujita N, Ezaki T, Fukuda M.

J Gen Appl Microbiol. 2017 Mar 17;63(1):1-10. doi: 10.2323/jgam.2016.06.003. Epub 2016 Dec 17.

12.

Draft genome sequence of Micromonospora sp. DSW705 and distribution of biosynthetic gene clusters for depsipeptides bearing 4-amino-2,4-pentadienoate in actinomycetes.

Komaki H, Ichikawa N, Hosoyama A, Hamada M, Harunari E, Ishikawa A, Igarashi Y.

Stand Genomic Sci. 2016 Oct 22;11:84. eCollection 2016.

13.

Draft Genome Sequence of Streptomyces sp. TP-A0874, a Catechoserine Producer.

Komaki H, Hosoyama A, Ichikawa N, Igarashi Y.

Genome Announc. 2016 Oct 20;4(5). pii: e01163-16. doi: 10.1128/genomeA.01163-16.

14.

Draft genome sequence of Streptomyces sp. MWW064 for elucidating the rakicidin biosynthetic pathway.

Komaki H, Ishikawa A, Ichikawa N, Hosoyama A, Hamada M, Harunari E, Nihira T, Panbangred W, Igarashi Y.

Stand Genomic Sci. 2016 Oct 21;11:83. eCollection 2016.

15.

Draft Genome Sequence of Thermogemmatispora onikobensis NBRC 111776T, an Aerial Mycelium- and Spore-Forming Thermophilic Bacterium Belonging to the Class Ktedonobacteria.

Komaki H, Hosoyama A, Yabe S, Yokota A, Uchino Y, Takano H.

Genome Announc. 2016 Oct 13;4(5). pii: e01156-16. doi: 10.1128/genomeA.01156-16.

16.

Draft Genome Sequence of Marine-Derived Bacillus subtilis TP-B0611, a Producer of Bacilosarcins and Amicoumacins.

Komaki H, Hosoyama A, Ichikawa N, Igarashi Y.

Genome Announc. 2016 Oct 13;4(5). pii: e01134-16. doi: 10.1128/genomeA.01134-16.

17.

Draft Genome Sequence of Streptomyces sp. SPMA113, a Prajinamide Producer.

Komaki H, Hosoyama A, Ichikawa N, Panbangred W, Igarashi Y.

Genome Announc. 2016 Oct 13;4(5). pii: e01126-16. doi: 10.1128/genomeA.01126-16.

18.

Genome sequence of Aspergillus luchuensis NBRC 4314.

Yamada O, Machida M, Hosoyama A, Goto M, Takahashi T, Futagami T, Yamagata Y, Takeuchi M, Kobayashi T, Koike H, Abe K, Asai K, Arita M, Fujita N, Fukuda K, Higa KI, Horikawa H, Ishikawa T, Jinno K, Kato Y, Kirimura K, Mizutani O, Nakasone K, Sano M, Shiraishi Y, Tsukahara M, Gomi K.

DNA Res. 2016 Dec;23(6):507-515. Epub 2016 Sep 20.

19.

Reclassification of Amycolicicoccus subflavus as Hoyosella subflava comb. nov. and emended descriptions of the genus Hoyosella and Hoyosella altamirensis.

Hamada M, Shibata C, Sakurai K, Hosoyama A, Oji S, Teramoto K, Tamura T.

Int J Syst Evol Microbiol. 2016 Nov;66(11):4711-4715. doi: 10.1099/ijsem.0.001415. Epub 2016 Aug 10.

PMID:
27514929
20.

Draft Genome Sequence of Comamonas thiooxydans Strain PHE2-6 (NBRC 110656), a Chlorinated-Ethene-Degrading Bacterium.

Shimodaira J, Yonezuka K, Tabata M, Nagase S, Kasai D, Hosoyama A, Yamazoe A, Fujita N, Fukuda M.

Genome Announc. 2016 Jun 23;4(3). pii: e00487-16. doi: 10.1128/genomeA.00487-16.

21.

Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader.

Ohtsubo Y, Nonoyama S, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2016 Jun 9;4(3). pii: e00530-16. doi: 10.1128/genomeA.00530-16.

22.

Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader.

Ohtsubo Y, Nonoyama S, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2016 Jun 9;4(3). pii: e00529-16. doi: 10.1128/genomeA.00529-16.

23.

Isolation and characterization of a bacterial strain that degrades cis-dichloroethenein the absence of aromatic inducers.

Yonezuka K, Araki N, Shimodaira J, Ohji S, Hosoyama A, Numata M, Yamazoe A, Kasai D, Masai E, Fujita N, Ezaki T, Fukuda M.

J Gen Appl Microbiol. 2016 Jul 14;62(3):118-25. doi: 10.2323/jgam.2015.12.002. Epub 2016 May 23.

24.

Phylogenetics of family Enterobacteriaceae and proposal to reclassify Escherichia hermannii and Salmonella subterranea as Atlantibacter hermannii and Atlantibacter subterranea gen. nov., comb. nov.

Hata H, Natori T, Mizuno T, Kanazawa I, Eldesouky I, Hayashi M, Miyata M, Fukunaga H, Ohji S, Hosoyama A, Aono E, Yamazoe A, Tsuchikane K, Fujita N, Ezaki T.

Microbiol Immunol. 2016 May;60(5):303-11. doi: 10.1111/1348-0421.12374.

25.

Draft Genome Sequence of a Chlorinated-Ethene Degrader, Cupriavidus necator Strain PHE3-6 (NBRC 110655).

Yonezuka K, Shimodaira J, Tabata M, Nagase S, Kasai D, Hosoyama A, Yamazoe A, Fujita N, Fukuda M.

Genome Announc. 2016 Mar 3;4(2). pii: e01743-15. doi: 10.1128/genomeA.01743-15.

26.

Draft Genome Sequence of Linfuranone Producer Microbispora sp. GMKU 363.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Thamchaipenet A, Igarashi Y.

Genome Announc. 2015 Dec 10;3(6). pii: e01471-15. doi: 10.1128/genomeA.01471-15.

27.

Draft Genome Sequence of Streptomyces sp. TP-A0356, a Producer of Yatakemycin.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Igarashi Y.

Genome Announc. 2015 Dec 10;3(6). pii: e01446-15. doi: 10.1128/genomeA.01446-15.

28.

Draft Genome Sequence of Nonomuraea sp. TP-A0861, a Producer of Myxochelin A.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Igarashi Y.

Genome Announc. 2015 Dec 10;3(6). pii: e01430-15. doi: 10.1128/genomeA.01430-15.

29.

Draft Genome Sequence of Streptomyces sp. TP-A0871, a Producer of Heronamide C.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Igarashi Y.

Genome Announc. 2015 Dec 10;3(6). pii: e01429-15. doi: 10.1128/genomeA.01429-15.

30.

Complete Genome Sequence of Sphingopyxis macrogoltabida Type Strain NBRC 15033, Originally Isolated as a Polyethylene Glycol Degrader.

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Dec 10;3(6). pii: e01401-15. doi: 10.1128/genomeA.01401-15.

31.

Complete Genome Sequence of a Polypropylene Glycol-Degrading Strain, Microbacterium sp. No. 7.

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Dec 10;3(6). pii: e01400-15. doi: 10.1128/genomeA.01400-15.

32.

Complete Genome Sequence of Polypropylene Glycol- and Polyethylene Glycol-Degrading Sphingopyxis macrogoltabida Strain EY-1.

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Dec 3;3(6). pii: e01399-15. doi: 10.1128/genomeA.01399-15.

33.

Complete genome sequencing of Dehalococcoides sp. strain UCH007 using a differential reads picking method.

Uchino Y, Miura T, Hosoyama A, Ohji S, Yamazoe A, Ito M, Takahata Y, Suzuki K, Fujita N.

Stand Genomic Sci. 2015 Nov 14;10:102. doi: 10.1186/s40793-015-0095-9. eCollection 2015.

34.

Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas stutzeri KF716 (NBRC 110668).

Hirose J, Yamazoe A, Hosoyama A, Kimura N, Suenaga H, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Oct 22;3(5). pii: e01215-15. doi: 10.1128/genomeA.01215-15.

35.

Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Comamonas testosteroni KF712 (NBRC 110673).

Hirose J, Yamazoe A, Hosoyama A, Kimura N, Suenaga H, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Oct 15;3(5). pii: e01214-15. doi: 10.1128/genomeA.01214-15.

36.

Draft Genome Sequence of Streptomyces sp. TP-A0890, a Producer of FR-900452 and A-74863a.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Igarashi Y.

Genome Announc. 2015 Oct 15;3(5). pii: e01212-15. doi: 10.1128/genomeA.01212-15.

37.

Complete Genome Sequence of Polyvinyl Alcohol-Degrading Strain Sphingopyxis sp. 113P3 (NBRC 111507).

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Oct 15;3(5). pii: e01169-15. doi: 10.1128/genomeA.01169-15.

38.

Draft Genome Sequence of an Anthracimycin Producer, Streptomyces sp. TP-A0875.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Harunari E, Igarashi Y.

Genome Announc. 2015 Oct 8;3(5). pii: e01149-15. doi: 10.1128/genomeA.01149-15.

39.

Draft genome sequence of marine-derived Streptomyces sp. TP-A0598, a producer of anti-MRSA antibiotic lydicamycins.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Igarashi Y.

Stand Genomic Sci. 2015 Aug 26;10:58. doi: 10.1186/s40793-015-0046-5. eCollection 2015.

40.

Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium.

Hamada M, Shibata C, Saitou S, Tamura T, Komaki H, Ichikawa N, Oguchi A, Hosoyama A, Fujita N, Yamamura H, Hayakawa M, Suzuki K.

Int J Syst Evol Microbiol. 2015 Dec;65(12):4394-402. doi: 10.1099/ijsem.0.000587. Epub 2015 Sep 8.

PMID:
26354549
41.

Draft genome sequence of Streptomyces sp. TP-A0882 reveals putative butyrolactol biosynthetic pathway.

Komaki H, Ichikawa N, Hosoyama A, Fujita N, Igarashi Y.

FEMS Microbiol Lett. 2015 Oct;362(20). pii: fnv155. doi: 10.1093/femsle/fnv155. Epub 2015 Sep 3.

PMID:
26337155
42.

Draft Genome Sequence of Comamonas sp. Strain E6 (NBRC 107749), a Degrader of Phthalate Isomers through the Protocatechuate 4,5-Cleavage Pathway.

Shimodaira J, Kamimura N, Hosoyama A, Yamazoe A, Fujita N, Masai E.

Genome Announc. 2015 Jun 18;3(3). pii: e00643-15. doi: 10.1128/genomeA.00643-15.

43.

Draft Genome Sequence of Pseudomonas aeruginosa KF702 (NBRC 110665), a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil.

Fujihara H, Yamazoe A, Hosoyama A, Suenaga H, Kimura N, Hirose J, Watanabe T, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 May 21;3(3). pii: e00517-15. doi: 10.1128/genomeA.00517-15.

44.

Draft Genome Sequence of Pseudomonas abietaniphila KF701 (NBRC110664), a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil.

Fujihara H, Yamazoe A, Hosoyama A, Suenaga H, Kimura N, Hirose J, Watanabe T, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 May 14;3(3). pii: e00473-15. doi: 10.1128/genomeA.00473-15.

45.

The Impact of Injections of Different Nutrients on the Bacterial Community and Its Dechlorination Activity in Chloroethene-Contaminated Groundwater.

Miura T, Yamazoe A, Ito M, Ohji S, Hosoyama A, Takahata Y, Fujita N.

Microbes Environ. 2015;30(2):164-71. doi: 10.1264/jsme2.ME14127. Epub 2015 Apr 15.

46.

Draft Genome Sequence of Pseudomonas toyotomiensis KF710, a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil.

Watanabe T, Yamazoe A, Hosoyama A, Fujihara H, Suenaga H, Hirose J, Futagami T, Goto M, Kimura N, Furukawa K.

Genome Announc. 2015 Apr 2;3(2). pii: e00223-15. doi: 10.1128/genomeA.00223-15.

47.

Genetic basis of the highly efficient yeast Kluyveromyces marxianus: complete genome sequence and transcriptome analyses.

Lertwattanasakul N, Kosaka T, Hosoyama A, Suzuki Y, Rodrussamee N, Matsutani M, Murata M, Fujimoto N, Suprayogi, Tsuchikane K, Limtong S, Fujita N, Yamada M.

Biotechnol Biofuels. 2015 Mar 18;8:47. doi: 10.1186/s13068-015-0227-x. eCollection 2015.

48.

Complete Genome Sequences of Sulfurospirillum Strains UCH001 and UCH003 Isolated from Groundwater in Japan.

Miura T, Uchino Y, Tsuchikane K, Ohtsubo Y, Ohji S, Hosoyama A, Ito M, Takahata Y, Yamazoe A, Suzuki K, Fujita N.

Genome Announc. 2015 Mar 26;3(2). pii: e00236-15. doi: 10.1128/genomeA.00236-15.

49.

Draft Genome Sequence of Cupriavidus pauculus Strain KF709, a Biphenyl-Utilizing Bacterium Isolated from Biphenyl-Contaminated Soil.

Watanabe T, Yamazoe A, Hosoyama A, Fujihara H, Suenaga H, Hirose J, Futagami T, Goto M, Kimura N, Furukawa K.

Genome Announc. 2015 Mar 26;3(2). pii: e00222-15. doi: 10.1128/genomeA.00222-15.

50.

Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Cupriavidus basilensis KF708 (NBRC 110671) Isolated from Biphenyl-Contaminated Soil.

Suenaga H, Yamazoe A, Hosoyama A, Kimura N, Hirose J, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Mar 19;3(2). pii: e00143-15. doi: 10.1128/genomeA.00143-15.

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