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Items: 1 to 50 of 197

1.

Critical assessment of bioinformatics methods for the characterization of pathological repeat expansions with single-molecule sequencing data.

Chiara M, Zambelli F, Picardi E, Horner DS, Pesole G.

Brief Bioinform. 2019 Dec 3. pii: bbz099. doi: 10.1093/bib/bbz099. [Epub ahead of print]

PMID:
31792498
2.

Staphylococcus arlettae Genomics: Novel Insights on Candidate Antibiotic Resistance and Virulence Genes in an Emerging Opportunistic Pathogen.

Lavecchia A, Chiara M, De Virgilio C, Manzari C, Monno R, De Carlo A, Pazzani C, Horner D, Pesole G, Placido A.

Microorganisms. 2019 Nov 19;7(11). pii: E580. doi: 10.3390/microorganisms7110580.

3.

Thromboprophylaxis in lower limb immobilisation after injury (TiLLI).

Horner D, Goodacre S, Pandor A, Nokes T, Keenan J, Hunt B, Davis S, Stevens JW, Hogg K.

Emerg Med J. 2019 Nov 6. pii: emermed-2019-208944. doi: 10.1136/emermed-2019-208944. [Epub ahead of print]

4.

The Plant NF-Y DNA Matrix In Vitro and In Vivo.

Gnesutta N, Chiara M, Bernardini A, Balestra M, Horner DS, Mantovani R.

Plants (Basel). 2019 Oct 10;8(10). pii: E406. doi: 10.3390/plants8100406.

5.

Pharmacological thromboprophylaxis to prevent venous thromboembolism in patients with temporary lower limb immobilization after injury: systematic review and network meta-analysis.

Horner D, Stevens JW, Pandor A, Nokes T, Keenan J, de Wit K, Goodacre S.

J Thromb Haemost. 2019 Oct 26. doi: 10.1111/jth.14666. [Epub ahead of print]

PMID:
31654551
6.

Skin autofluorescence: an emerging biomarker in persons with kidney disease.

Hörner DV, Taal MW.

Curr Opin Nephrol Hypertens. 2019 Nov;28(6):507-512. doi: 10.1097/MNH.0000000000000549.

PMID:
31589190
7.

BET 2: Is sexual dysfunction a recognised sign of cauda equina syndrome in the ED?

Angus M, Horner D.

Emerg Med J. 2019 Aug;36(8):508-510. doi: 10.1136/emermed-2019-208777.2.

PMID:
31358554
8.

Evolution of an insect immune barrier through horizontal gene transfer mediated by a parasitic wasp.

Di Lelio I, Illiano A, Astarita F, Gianfranceschi L, Horner D, Varricchio P, Amoresano A, Pucci P, Pennacchio F, Caccia S.

PLoS Genet. 2019 Mar 5;15(3):e1007998. doi: 10.1371/journal.pgen.1007998. eCollection 2019 Mar.

9.

Using Small Samples to Evaluate Normative Reference Ranges for Retinal Imaging Measures.

Swanson WH, King BJ, Horner DG.

Optom Vis Sci. 2019 Mar;96(3):146-155. doi: 10.1097/OPX.0000000000001353.

10.

Decision-analysis modelling of the effects of thromboprophylaxis for people with lower limb immobilisation for injury.

Davis S, Goodacre S, Pandor A, Horner D, Stevens JW, de Wit K, Hunt BJ.

Br J Haematol. 2019 Jul;186(1):166-168. doi: 10.1111/bjh.15748. Epub 2019 Jan 29. No abstract available.

PMID:
30697707
11.

Individual risk factors predictive of venous thromboembolism in patients with temporary lower limb immobilization due to injury: a systematic review.

Horner D, Pandor A, Goodacre S, Clowes M, Hunt BJ.

J Thromb Haemost. 2019 Feb;17(2):329-344. doi: 10.1111/jth.14367. Epub 2019 Feb 7.

12.

Draft Genome Sequences of Three Novel Staphylococcus arlettae Strains Isolated from a Disused Biological Safety Cabinet.

Lavecchia A, Chiara M, Manzari C, Trotta M, Marzano M, Horner D, Pesole G, Placido A.

Microbiol Resour Announc. 2018 Oct 4;7(13). pii: e01012-18. doi: 10.1128/MRA.01012-18. eCollection 2018 Oct.

13.

SMRT long reads and Direct Label and Stain optical maps allow the generation of a high-quality genome assembly for the European barn swallow (Hirundo rustica rustica).

Formenti G, Chiara M, Poveda L, Francoijs KJ, Bonisoli-Alquati A, Canova L, Gianfranceschi L, Horner DS, Saino N.

Gigascience. 2019 Jan 1;8(1). doi: 10.1093/gigascience/giy142.

14.

Oxygen therapy for medical patients.

Horner D, O'Driscoll R.

BMJ. 2018 Oct 24;363:k4436. doi: 10.1136/bmj.k4436. No abstract available. Erratum in: BMJ. 2018 Oct 31;363:k4599.

PMID:
30355704
15.

IS26 mediated antimicrobial resistance gene shuffling from the chromosome to a mosaic conjugative FII plasmid.

Oliva M, Monno R, Addabbo P, Pesole G, Scrascia M, Calia C, Dionisi AM, Chiara M, Horner DS, Manzari C, Pazzani C.

Plasmid. 2018 Nov;100:22-30. doi: 10.1016/j.plasmid.2018.10.001. Epub 2018 Oct 16.

PMID:
30336162
16.

Pilot study on circulating miRNA signature in children with obesity born small for gestational age and appropriate for gestational age.

Marzano F, Faienza MF, Caratozzolo MF, Brunetti G, Chiara M, Horner DS, Annese A, D'Erchia AM, Consiglio A, Pesole G, Sbisà E, Inzaghi E, Cianfarani S, Tullo A.

Pediatr Obes. 2018 Dec;13(12):803-811. doi: 10.1111/ijpo.12439. Epub 2018 Aug 29.

PMID:
30160046
17.

British Thoracic Society Guideline for the initial outpatient management of pulmonary embolism.

Howard LS, Barden S, Condliffe R, Connolly V, Davies C, Donaldson J, Everett B, Free C, Horner D, Hunter L, Kaler J, Nelson-Piercy C, O'Dowd E, Patel R, Preston W, Sheares K, Tait C.

BMJ Open Respir Res. 2018 Jun 13;5(1):e000281. doi: 10.1136/bmjresp-2018-000281. eCollection 2018.

18.

British Thoracic Society Guideline for the initial outpatient management of pulmonary embolism (PE).

Howard LSGE, Barden S, Condliffe R, Connolly V, Davies CWH, Donaldson J, Everett B, Free C, Horner D, Hunter L, Kaler J, Nelson-Piercy C, O-Dowd E, Patel R, Preston W, Sheares K, Campbell T.

Thorax. 2018 Jul;73(Suppl 2):ii1-ii29. doi: 10.1136/thoraxjnl-2018-211539. Epub 2018 Jun 13. Review. No abstract available.

PMID:
29898978
19.

Bet 2: Does intravenous vitamin C improve mortality in patients with severe sepsis?

Sheikh M, Horner D.

Emerg Med J. 2018 Apr;35(4):272-274. doi: 10.1136/emermed-2018-207608.3. Review.

PMID:
29559543
20.

Bet 1: Can induced hypertension improve outcome following acute traumatic spinal cord injury?

Bertram-Ralph E, Horner D.

Emerg Med J. 2018 Apr;35(4):270-272. doi: 10.1136/emermed-2018-207608.2. Review.

PMID:
29559542
21.

Design of a Broad-Range Bacteriophage Cocktail That Reduces Pseudomonas aeruginosa Biofilms and Treats Acute Infections in Two Animal Models.

Forti F, Roach DR, Cafora M, Pasini ME, Horner DS, Fiscarelli EV, Rossitto M, Cariani L, Briani F, Debarbieux L, Ghisotti D.

Antimicrob Agents Chemother. 2018 May 25;62(6). pii: e02573-17. doi: 10.1128/AAC.02573-17. Print 2018 Jun.

22.

Whole transcriptome profiling of Late-Onset Alzheimer's Disease patients provides insights into the molecular changes involved in the disease.

Annese A, Manzari C, Lionetti C, Picardi E, Horner DS, Chiara M, Caratozzolo MF, Tullo A, Fosso B, Pesole G, D'Erchia AM.

Sci Rep. 2018 Mar 9;8(1):4282. doi: 10.1038/s41598-018-22701-2.

23.

Major publications in the critical care pharmacotherapy literature: January-December 2017.

Hammond DA, Baumgartner L, Cooper C, Donahey E, Harris SA, Mercer JM, Morris M, Patel MK, Plewa-Rusiecki AM, Poore AA, Szaniawski R, Horner D.

J Crit Care. 2018 Jun;45:239-246. doi: 10.1016/j.jcrc.2018.02.012. Epub 2018 Mar 2. Review.

PMID:
29496373
24.

CoVaCS: a consensus variant calling system.

Chiara M, Gioiosa S, Chillemi G, D'Antonio M, Flati T, Picardi E, Zambelli F, Horner DS, Pesole G, Castrignanò T.

BMC Genomics. 2018 Feb 5;19(1):120. doi: 10.1186/s12864-018-4508-1.

25.

A-GAME: improving the assembly of pooled functional metagenomics sequence data.

Chiara M, Placido A, Picardi E, Ceci LR, Horner DS, Pesole G.

BMC Genomics. 2018 Jan 12;19(1):44. doi: 10.1186/s12864-017-4369-z.

26.

A prospective, observational cohort study of patients presenting to an emergency department with acute shoulder trauma: the Manchester emergency shoulder (MESH) project.

Callaghan MJ, Baombe JP, Horner D, Hutchinson CE, Sandher D, Carley S.

BMC Emerg Med. 2017 Dec 22;17(1):40. doi: 10.1186/s12873-017-0149-y.

27.

Social-media-enabled learning in emergency medicine: a case study of the growth, engagement and impact of a free open access medical education blog.

Carley S, Beardsell I, May N, Crowe L, Baombe J, Grayson A, Carden R, Liebig A, Gray C, Fisher R, Horner D, Howard L, Body R.

Postgrad Med J. 2018 Feb;94(1108):92-96. doi: 10.1136/postgradmedj-2017-135104. Epub 2017 Oct 20.

PMID:
29054933
28.

Major publications in the critical care pharmacotherapy literature: January-December 2016.

Horner D, Altshuler D, Droege C, Feih J, Ferguson K, Fiorenza M, Greathouse K, Hamilton L, Pfaff C, Roller L, Stollings J, Wong A.

J Crit Care. 2018 Feb;43:327-339. doi: 10.1016/j.jcrc.2017.09.178. Epub 2017 Sep 22. Review.

PMID:
28974331
29.

Massive transcriptome sequencing of human spinal cord tissues provides new insights into motor neuron degeneration in ALS.

D'Erchia AM, Gallo A, Manzari C, Raho S, Horner DS, Chiara M, Valletti A, Aiello I, Mastropasqua F, Ciaccia L, Locatelli F, Pisani F, Nicchia GP, Svelto M, Pesole G, Picardi E.

Sci Rep. 2017 Aug 30;7(1):10046. doi: 10.1038/s41598-017-10488-7.

30.

ESCRT genes and regulation of developmental signaling.

Horner DS, Pasini ME, Beltrame M, Mastrodonato V, Morelli E, Vaccari T.

Semin Cell Dev Biol. 2018 Feb;74:29-39. doi: 10.1016/j.semcdb.2017.08.038. Epub 2017 Aug 25. Review.

PMID:
28847745
31.

Transcriptomic analysis of nickel exposure in Sphingobium sp. ba1 cells using RNA-seq.

Volpicella M, Leoni C, Manzari C, Chiara M, Picardi E, Piancone E, Italiano F, D'Erchia A, Trotta M, Horner DS, Pesole G, Ceci LR.

Sci Rep. 2017 Aug 15;7(1):8262. doi: 10.1038/s41598-017-08934-7.

32.

CONSTANS Imparts DNA Sequence Specificity to the Histone Fold NF-YB/NF-YC Dimer.

Gnesutta N, Kumimoto RW, Swain S, Chiara M, Siriwardana C, Horner DS, Holt BF 3rd, Mantovani R.

Plant Cell. 2017 Jun;29(6):1516-1532. doi: 10.1105/tpc.16.00864. Epub 2017 May 19.

33.

Using perimetric data to estimate ganglion cell loss for detecting progression of glaucoma: a comparison of models.

Price DA, Swanson WH, Horner DG.

Ophthalmic Physiol Opt. 2017 Jul;37(4):409-419. doi: 10.1111/opo.12378. Epub 2017 Apr 25.

34.

BET 2: Striking the right balance: anticoagulation and isolated distal deep vein thrombosis.

Jones T, Horner D.

Emerg Med J. 2017 May;34(5):334-336. doi: 10.1136/emermed-2017-206732.2. Review.

PMID:
28428437
35.

BET 1: A glass half full? Thrombolysis for the treatment of submassive pulmonary embolism.

Barrett L, Horner D.

Emerg Med J. 2017 May;34(5):331-334. doi: 10.1136/emermed-2017-206732.1. Review.

PMID:
28428435
36.

Single-cell transcriptomics reveals specific RNA editing signatures in the human brain.

Picardi E, Horner DS, Pesole G.

RNA. 2017 Jun;23(6):860-865. doi: 10.1261/rna.058271.116. Epub 2017 Mar 3.

37.

Mentoring: Positively Influencing Job Satisfaction and Retention of New Hire Nurse Practitioners.

Horner DK.

Plast Surg Nurs. 2017 Jan/Mar;37(1):7-22. doi: 10.1097/PSN.0000000000000169.

PMID:
28244960
38.

Corrigendum: No Change in the Mucosal Gut Microbiome is Associated with Celiac Disease-Specific Microbiome Alteration in Adult Patients.

D'Argenio V, Casaburi G, Precone V, Pagliuca C, Colicchio R, Sarnataro D, Discepolo V, Kim SM, Russo I, Del Vecchio Blanco G, Horner DS, Chiara M, Pesole G, Salvatore P, Monteleone G, Ciacci C, Caporaso GJ, Jabrì B, Salvatore F, Sacchetti L.

Am J Gastroenterol. 2017 Jan;112(1):193. doi: 10.1038/ajg.2016.561. Epub 2016 Dec 13. No abstract available.

PMID:
27958280
39.

A novel group of IncQ1 plasmids conferring multidrug resistance.

Oliva M, Monno R, D'Addabbo P, Pesole G, Dionisi AM, Scrascia M, Chiara M, Horner DS, Manzari C, Luzzi I, Calia C, D'Erchia AM, Pazzani C.

Plasmid. 2017 Jan;89:22-26. doi: 10.1016/j.plasmid.2016.11.005. Epub 2016 Dec 1.

PMID:
27916622
40.

A Survey of Staff Perceptions of an Emergency Medicine Pharmacist Program in a Community Hospital: A Brief Report.

Splawski J, Horner D, Tao K.

Ann Emerg Med. 2017 Mar;69(3):308-314. doi: 10.1016/j.annemergmed.2016.08.451. Epub 2016 Oct 28.

PMID:
27838070
41.

No Change in the Mucosal Gut Mycobioma Is Associated with Celiac Disease-Specific Microbiome Alteration in Adult Patients.

D'Argenio V, Casaburi G, Precone V, Pagliuca C, Colicchio R, Sarnataro D, Discepolo V, Kim SM, Russo I, Del Vecchio Blanco G, Horner DS, Chiara M, Pesole G, Salvatore P, Monteleone G, Ciacci C, Caporaso GJ, Jabrì B, Salvatore F, Sacchetti L.

Am J Gastroenterol. 2016 Nov;111(11):1659-1661. doi: 10.1038/ajg.2016.227. No abstract available. Erratum in: Am J Gastroenterol. 2017 Jan;112(1):193.

PMID:
27808136
42.

Geographic Population Structure in Epstein-Barr Virus Revealed by Comparative Genomics.

Chiara M, Manzari C, Lionetti C, Mechelli R, Anastasiadou E, Chiara Buscarinu M, Ristori G, Salvetti M, Picardi E, D'Erchia AM, Pesole G, Horner DS.

Genome Biol Evol. 2016 Dec 14;8(11):3284-3291.

43.

Contrast sensitivity perimetry data from adults free of eye disease.

Swanson WH, Dul MW, Horner DG, Malinovsky VE.

Data Brief. 2016 Jun 21;8:654-8. doi: 10.1016/j.dib.2016.06.012. eCollection 2016 Sep.

44.

The Evolution of Olfactory Gene Families in Drosophila and the Genomic Basis of chemical-Ecological Adaptation in Drosophila suzukii.

Ramasamy S, Ometto L, Crava CM, Revadi S, Kaur R, Horner DS, Pisani D, Dekker T, Anfora G, Rota-Stabelli O.

Genome Biol Evol. 2016 Aug 16;8(8):2297-311. doi: 10.1093/gbe/evw160.

45.

BET 2: Should real resuscitationists use airway checklists?

Hardy G, Horner D.

Emerg Med J. 2016 Jun;33(6):439-41. doi: 10.1136/emermed-2016-205871.2.

PMID:
27199142
46.

Individual differences in the shape of the nasal visual field.

Swanson WH, Dul MW, Horner DG, Malinovsky VE.

Vision Res. 2017 Dec;141:23-29. doi: 10.1016/j.visres.2016.04.001. Epub 2016 Jun 16.

47.

Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N. flavescens Strain in Duodenum of Adult Celiac Patients.

D'Argenio V, Casaburi G, Precone V, Pagliuca C, Colicchio R, Sarnataro D, Discepolo V, Kim SM, Russo I, Del Vecchio Blanco G, Horner DS, Chiara M, Pesole G, Salvatore P, Monteleone G, Ciacci C, Caporaso GJ, Jabrì B, Salvatore F, Sacchetti L.

Am J Gastroenterol. 2016 Jun;111(6):879-90. doi: 10.1038/ajg.2016.95. Epub 2016 Apr 5.

48.

Diagnosing brain death.

Jackson MJ, Coleman L, Wilson A, Hanison J, Horner D; North West Research and Audit Group Journal Club.

Anaesthesia. 2016 Feb;71(2):232. doi: 10.1111/anae.13337. No abstract available.

49.

Genome Sequencing of Multiple Isolates Highlights Subtelomeric Genomic Diversity within Fusarium fujikuroi.

Chiara M, Fanelli F, Mulè G, Logrieco AF, Pesole G, Leslie JF, Horner DS, Toomajian C.

Genome Biol Evol. 2015 Oct 15;7(11):3062-9. doi: 10.1093/gbe/evv198.

50.

An analysis of patient safety incident reports describing injuries to staff working in critical care in the North West of England between 2009 and 2013.

Thomas AN, Horner D, Taylor RJ.

J Intensive Care Soc. 2015 Aug;16(3):208-214. doi: 10.1177/1751143715574510. Epub 2015 Mar 2.

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