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Items: 41

1.

Integration of protein phosphorylation, acetylation, and methylation data sets to outline lung cancer signaling networks.

Grimes M, Hall B, Foltz L, Levy T, Rikova K, Gaiser J, Cook W, Smirnova E, Wheeler T, Clark NR, Lachmann A, Zhang B, Hornbeck P, Ma'ayan A, Comb M.

Sci Signal. 2018 May 22;11(531). pii: eaaq1087. doi: 10.1126/scisignal.aaq1087.

PMID:
29789295
2.

Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data.

Fernandez NF, Gundersen GW, Rahman A, Grimes ML, Rikova K, Hornbeck P, Ma'ayan A.

Sci Data. 2017 Oct 10;4:170151. doi: 10.1038/sdata.2017.151.

3.

Crk Tyrosine Phosphorylation Regulates PDGF-BB-inducible Src Activation and Breast Tumorigenicity and Metastasis.

Kumar S, Lu B, Davra V, Hornbeck P, Machida K, Birge RB.

Mol Cancer Res. 2018 Jan;16(1):173-183. doi: 10.1158/1541-7786.MCR-17-0242. Epub 2017 Oct 3.

PMID:
28974561
4.

Double-Immunodiffusion Assay for Detecting Specific Antibodies (Ouchterlony).

Hornbeck P.

Curr Protoc Immunol. 2017 Feb 2;116:2.3.1-2.3.4. doi: 10.1002/cpim.18.

PMID:
28150863
5.

Isotype Determination of Antibodies.

Hornbeck P, Fleisher TA, Papadopoulos NM.

Curr Protoc Immunol. 2017 Feb 2;116:2.2.1-2.2.7. doi: 10.1002/cpim.19.

PMID:
28150862
6.

Reciprocal regulation of Abl kinase by Crk Y251 and Abi1 controls invasive phenotypes in glioblastoma.

Kumar S, Lu B, Dixit U, Hossain S, Liu Y, Li J, Hornbeck P, Zheng W, Sowalsky AG, Kotula L, Birge RB.

Oncotarget. 2015 Nov 10;6(35):37792-807. doi: 10.18632/oncotarget.6096.

7.

Enzyme-Linked Immunosorbent Assays.

Hornbeck PV.

Curr Protoc Immunol. 2015 Aug 3;110:2.1.1-23. doi: 10.1002/0471142735.im0201s110.

PMID:
26237010
8.

PhosphoSitePlus, 2014: mutations, PTMs and recalibrations.

Hornbeck PV, Zhang B, Murray B, Kornhauser JM, Latham V, Skrzypek E.

Nucleic Acids Res. 2015 Jan;43(Database issue):D512-20. doi: 10.1093/nar/gku1267. Epub 2014 Dec 16.

9.

Iterative tyrosine phosphorylation controls non-canonical domain utilization in Crk.

Sriram G, Jankowski W, Kasikara C, Reichman C, Saleh T, Nguyen KQ, Li J, Hornbeck P, Machida K, Liu T, Li H, Kalodimos CG, Birge RB.

Oncogene. 2015 Aug 6;34(32):4260-9. doi: 10.1038/onc.2014.361. Epub 2014 Nov 10.

10.

Signatures of natural selection on mutations of residues with multiple posttranslational modifications.

Gray VE, Liu L, Nirankari R, Hornbeck PV, Kumar S.

Mol Biol Evol. 2014 Jul;31(7):1641-5. doi: 10.1093/molbev/msu137. Epub 2014 Apr 16.

11.

PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse.

Hornbeck PV, Kornhauser JM, Tkachev S, Zhang B, Skrzypek E, Murray B, Latham V, Sullivan M.

Nucleic Acids Res. 2012 Jan;40(Database issue):D261-70. doi: 10.1093/nar/gkr1122. Epub 2011 Dec 1.

12.

Phosphorylation of Crk on tyrosine 251 in the RT loop of the SH3C domain promotes Abl kinase transactivation.

Sriram G, Reichman C, Tunceroglu A, Kaushal N, Saleh T, Machida K, Mayer B, Ge Q, Li J, Hornbeck P, Kalodimos CG, Birge RB.

Oncogene. 2011 Nov 17;30(46):4645-55. doi: 10.1038/onc.2011.170. Epub 2011 May 23.

13.

The BioPAX community standard for pathway data sharing.

Demir E, Cary MP, Paley S, Fukuda K, Lemer C, Vastrik I, Wu G, D'Eustachio P, Schaefer C, Luciano J, Schacherer F, Martinez-Flores I, Hu Z, Jimenez-Jacinto V, Joshi-Tope G, Kandasamy K, Lopez-Fuentes AC, Mi H, Pichler E, Rodchenkov I, Splendiani A, Tkachev S, Zucker J, Gopinath G, Rajasimha H, Ramakrishnan R, Shah I, Syed M, Anwar N, Babur O, Blinov M, Brauner E, Corwin D, Donaldson S, Gibbons F, Goldberg R, Hornbeck P, Luna A, Murray-Rust P, Neumann E, Ruebenacker O, Samwald M, van Iersel M, Wimalaratne S, Allen K, Braun B, Whirl-Carrillo M, Cheung KH, Dahlquist K, Finney A, Gillespie M, Glass E, Gong L, Haw R, Honig M, Hubaut O, Kane D, Krupa S, Kutmon M, Leonard J, Marks D, Merberg D, Petri V, Pico A, Ravenscroft D, Ren L, Shah N, Sunshine M, Tang R, Whaley R, Letovksy S, Buetow KH, Rzhetsky A, Schachter V, Sobral BS, Dogrusoz U, McWeeney S, Aladjem M, Birney E, Collado-Vides J, Goto S, Hucka M, Le Novère N, Maltsev N, Pandey A, Thomas P, Wingender E, Karp PD, Sander C, Bader GD.

Nat Biotechnol. 2010 Sep;28(9):935-42. doi: 10.1038/nbt.1666. Epub 2010 Sep 9. Erratum in: Nat Biotechnol. 2010 Dec;28(12):1308. Nat Biotechnol. 2012 Apr;30(4):365. Reubenacker, Oliver [corrected to Ruebenacker, Oliver].

14.

Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases.

Moritz A, Li Y, Guo A, Villén J, Wang Y, MacNeill J, Kornhauser J, Sprott K, Zhou J, Possemato A, Ren JM, Hornbeck P, Cantley LC, Gygi SP, Rush J, Comb MJ.

Sci Signal. 2010 Aug 24;3(136):ra64. doi: 10.1126/scisignal.2000998.

15.

Mst4 and Ezrin induce brush borders downstream of the Lkb1/Strad/Mo25 polarization complex.

ten Klooster JP, Jansen M, Yuan J, Oorschot V, Begthel H, Di Giacomo V, Colland F, de Koning J, Maurice MM, Hornbeck P, Clevers H.

Dev Cell. 2009 Apr;16(4):551-62. doi: 10.1016/j.devcel.2009.01.016.

16.

Double-immunodiffusion assay for detecting specific antibodies.

Hornbeck P.

Curr Protoc Immunol. 2001 May;Chapter 2:Unit 2.3. doi: 10.1002/0471142735.im0203s00. Review.

PMID:
18432768
17.

Isotype determination of antibodies.

Hornbeck P, Fleisher TA, Papadopoulos NM.

Curr Protoc Immunol. 2001 May;Chapter 2:Unit 2.2. doi: 10.1002/0471142735.im0202s01. Review.

PMID:
18432767
18.

Enzyme-linked immunosorbent assays.

Hornbeck P.

Curr Protoc Immunol. 2001 May;Chapter 2:Unit 2.1. doi: 10.1002/0471142735.im0201s01. Review.

PMID:
18432761
19.

Isotype determination of antibodies.

Hornbeck P, Fleisher TA, Papadopoulos NM.

Curr Protoc Mol Biol. 2001 May;Chapter 11:Unit11.3. doi: 10.1002/0471142727.mb1103s18.

PMID:
18265075
20.

Enzyme-linked immunosorbent assays (ELISA).

Hornbeck P, Winston SE, Fuller SA.

Curr Protoc Mol Biol. 2001 May;Chapter 11:Unit11.2. doi: 10.1002/0471142727.mb1102s15.

PMID:
18265074
21.

PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation.

Hornbeck PV, Chabra I, Kornhauser JM, Skrzypek E, Zhang B.

Proteomics. 2004 Jun;4(6):1551-61.

PMID:
15174125
22.

Phosphoprotein analysis using antibodies broadly reactive against phosphorylated motifs.

Zhang H, Zha X, Tan Y, Hornbeck PV, Mastrangelo AJ, Alessi DR, Polakiewicz RD, Comb MJ.

J Biol Chem. 2002 Oct 18;277(42):39379-87. Epub 2002 Jul 31.

23.

Exploratory data analysis groupware for qualitative and quantitative electrophoretic gel analysis over the Internet-WebGel.

Lemkin PF, Myrick JM, Lakshmanan Y, Shue MJ, Patrick JL, Hornbeck PV, Thornwal GC, Partin AW.

Electrophoresis. 1999 Dec;20(18):3492-507.

PMID:
10612275
24.

Cigarette smoking, alcohol consumption, and screening mammography among women ages 50 and older.

Fredman L, Sexton M, Cui Y, Althuis M, Wehren L, Hornbeck P, Kanarek N.

Prev Med. 1999 Apr;28(4):407-17.

PMID:
10090870
26.

B cells from M167 mu kappa transgenic mice fail to proliferate after stimulation with soluble anti-Ig antibodies. A model for antigen-induced B cell anergy.

Sieckmann DG, Holmes K, Hornbeck P, Martin E, Guelde G, Bondada S, Longo DL, Kenny JJ.

J Immunol. 1994 May 15;152(10):4873-83.

PMID:
8176209
27.

Vimentin expression is differentially regulated by IL-2 and IL-4 in murine T cells.

Hornbeck PV, Garrels JI, Capetanaki Y, Heimer S.

J Immunol. 1993 Oct 15;151(8):4013-21.

PMID:
7691937
28.

A micro-radioimmunoassay for the measurement of intracellular cAMP.

Berg W, Hornbeck PV.

Biotechniques. 1993 Jul;15(1):56-9.

PMID:
7689853
30.

Interleukin 4 induces membrane Thy-1 expression on normal murine B cells.

Snapper CM, Hornbeck PV, Atasoy U, Pereira GM, Paul WE.

Proc Natl Acad Sci U S A. 1988 Aug;85(16):6107-11.

31.

Lamin B is rapidly phosphorylated in lymphocytes after activation of protein kinase C.

Hornbeck P, Huang KP, Paul WE.

Proc Natl Acad Sci U S A. 1988 Apr;85(7):2279-83.

32.

B lymphocyte activation. The roles of receptor cross-linkage and BSF-1.

Paul WE, Mizuguchi J, Beaven MA, Hornbeck P, Tsang W, Ohara J.

Adv Exp Med Biol. 1987;213:207-14. No abstract available.

PMID:
3498299
33.

Regulation of B-lymphocyte activation, proliferation, and differentiation.

Paul WE, Brown M, Hornbeck P, Mizuguchi J, Ohara J, Rabin E, Snapper C, Tsang W.

Ann N Y Acad Sci. 1987;505:82-9. Review. No abstract available.

PMID:
2825578
35.

Regulation of B-lymphocyte activation, proliferation, and immunoglobulin secretion.

Paul WE, Mizuguchi J, Brown M, Nakanishi K, Hornbeck P, Rabin E, Ohara J.

Cell Immunol. 1986 Apr 15;99(1):7-13.

PMID:
3093104
37.
39.

Strange connections in the unspecific parallel set.

Lewis GK, Hornbeck PV.

Surv Immunol Res. 1982;1(3):262-7. Review. No abstract available.

PMID:
6195716
40.

Antigen-specific molecules from murine T lymphocytes and T cell hybridomas.

Goodman JW, Lewis GK, Primi D, Hornbeck P, Ruddle NH.

Mol Immunol. 1980 Jul;17(7):933-45. No abstract available.

PMID:
6163975
41.

Morphology of the lower fourth premolar of certain cercopithecidae.

Hornbeck PV, Swindler DR.

J Dent Res. 1967 Sep-Oct;46(5):979-83. No abstract available.

PMID:
4964190

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