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Beyond rRNA and snRNA: tRNA as a 2'-O-methylation target for nucleolar and Cajal body box C/D RNPs.

Nostramo RT, Hopper AK.

Genes Dev. 2019 Jul 1;33(13-14):739-740. doi: 10.1101/gad.328443.119. Review.


Molecular determinants of metazoan tricRNA biogenesis.

Schmidt CA, Giusto JD, Bao A, Hopper AK, Matera AG.

Nucleic Acids Res. 2019 Jul 9;47(12):6452-6465. doi: 10.1093/nar/gkz311.


tRNA Processing and Subcellular Trafficking Proteins Multitask in Pathways for Other RNAs.

Hopper AK, Nostramo RT.

Front Genet. 2019 Feb 20;10:96. doi: 10.3389/fgene.2019.00096. eCollection 2019. Review.


From powerhouse to processing plant: conserved roles of mitochondrial outer membrane proteins in tRNA splicing.

Wan Y, Hopper AK.

Genes Dev. 2018 Oct 1;32(19-20):1309-1314. doi: 10.1101/gad.316257.118. Epub 2018 Sep 18.


Size matters: conserved proteins function in length-dependent nuclear export of circular RNAs.

Wan Y, Hopper AK.

Genes Dev. 2018 May 1;32(9-10):600-601. doi: 10.1101/gad.316216.118. Review.


Sharing the load: Mex67-Mtr2 cofunctions with Los1 in primary tRNA nuclear export.

Chatterjee K, Majumder S, Wan Y, Shah V, Wu J, Huang HY, Hopper AK.

Genes Dev. 2017 Nov 1;31(21):2186-2198. doi: 10.1101/gad.305904.117. Epub 2017 Dec 6.


tRNA dynamics between the nucleus, cytoplasm and mitochondrial surface: Location, location, location.

Chatterjee K, Nostramo RT, Wan Y, Hopper AK.

Biochim Biophys Acta Gene Regul Mech. 2018 Apr;1861(4):373-386. doi: 10.1016/j.bbagrm.2017.11.007. Epub 2017 Nov 28. Review.


Multiple Layers of Stress-Induced Regulation in tRNA Biology.

Huang HY, Hopper AK.

Life (Basel). 2016 Mar 23;6(2). pii: E16. doi: 10.3390/life6020016. Review.


Control of Saccharomyces cerevisiae pre-tRNA processing by environmental conditions.

Foretek D, Wu J, Hopper AK, Boguta M.

RNA. 2016 Mar;22(3):339-49. doi: 10.1261/rna.054973.115. Epub 2016 Jan 4.


Genome-wide screen uncovers novel pathways for tRNA processing and nuclear-cytoplasmic dynamics.

Wu J, Bao A, Chatterjee K, Wan Y, Hopper AK.

Genes Dev. 2015 Dec 15;29(24):2633-44. doi: 10.1101/gad.269803.115.


Quality Control Pathways for Nucleus-Encoded Eukaryotic tRNA Biosynthesis and Subcellular Trafficking.

Hopper AK, Huang HY.

Mol Cell Biol. 2015 Jun;35(12):2052-8. doi: 10.1128/MCB.00131-15. Epub 2015 Apr 6. Review.


In vivo biochemical analyses reveal distinct roles of β-importins and eEF1A in tRNA subcellular traffic.

Huang HY, Hopper AK.

Genes Dev. 2015 Apr 1;29(7):772-83. doi: 10.1101/gad.258293.115.


tRNA processing, modification, and subcellular dynamics: past, present, and future.

Phizicky EM, Hopper AK.

RNA. 2015 Apr;21(4):483-5. doi: 10.1261/rna.049932.115. No abstract available.


Requirement of the spindle pole body for targeting and/or tethering proteins to the inner nuclear membrane.

Diaz-Muñoz G, Harchar TA, Lai TP, Shen KF, Hopper AK.

Nucleus. 2014 Jul-Aug;5(4):352-66. doi: 10.4161/nucl.29793.


The cytoplasmic and nuclear populations of the eukaryote tRNA-isopentenyl transferase have distinct functions with implications in human cancer.

Smaldino PJ, Read DF, Pratt-Hyatt M, Hopper AK, Engelke DR.

Gene. 2015 Feb 1;556(1):13-8. doi: 10.1016/j.gene.2014.09.049. Epub 2014 Sep 26. Review.


Separate responses of karyopherins to glucose and amino acid availability regulate nucleocytoplasmic transport.

Huang HY, Hopper AK.

Mol Biol Cell. 2014 Sep 15;25(18):2840-52. doi: 10.1091/mbc.E14-04-0948. Epub 2014 Jul 23.


Retrograde transfer RNA nuclear import provides a new level of tRNA quality control in Saccharomyces cerevisiae.

Kramer EB, Hopper AK.

Proc Natl Acad Sci U S A. 2013 Dec 24;110(52):21042-7. doi: 10.1073/pnas.1316579110. Epub 2013 Dec 2.


Mod5 protein binds to tRNA gene complexes and affects local transcriptional silencing.

Pratt-Hyatt M, Pai DA, Haeusler RA, Wozniak GG, Good PD, Miller EL, McLeod IX, Yates JR 3rd, Hopper AK, Engelke DR.

Proc Natl Acad Sci U S A. 2013 Aug 13;110(33):E3081-9. doi: 10.1073/pnas.1219946110. Epub 2013 Jul 29. Erratum in: Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2397.


Yeast Trm7 interacts with distinct proteins for critical modifications of the tRNAPhe anticodon loop.

Guy MP, Podyma BM, Preston MA, Shaheen HH, Krivos KL, Limbach PA, Hopper AK, Phizicky EM.

RNA. 2012 Oct;18(10):1921-33. doi: 10.1261/rna.035287.112. Epub 2012 Aug 21.


Beyond tRNA cleavage: novel essential function for yeast tRNA splicing endonuclease unrelated to tRNA processing.

Dhungel N, Hopper AK.

Genes Dev. 2012 Mar 1;26(5):503-14. doi: 10.1101/gad.183004.111.


Transfer RNA travels from the cytoplasm to organelles.

Rubio MA, Hopper AK.

Wiley Interdiscip Rev RNA. 2011 Nov-Dec;2(6):802-17. doi: 10.1002/wrna.93. Epub 2011 Jul 11. Review.


Maf1 protein, repressor of RNA polymerase III, indirectly affects tRNA processing.

Karkusiewicz I, Turowski TW, Graczyk D, Towpik J, Dhungel N, Hopper AK, Boguta M.

J Biol Chem. 2011 Nov 11;286(45):39478-88. doi: 10.1074/jbc.M111.253310. Epub 2011 Sep 22.


Yeast ubiquitin ligase Rsp5 contains nuclear localization and export signals.

Cholbinski P, Jastrzebska Z, Wysocka-Kapcinska M, Plochocka D, Gornicka A, Hopper AK, Zoladek T.

Eur J Cell Biol. 2011 Oct;90(10):834-43. doi: 10.1016/j.ejcb.2011.06.008. Epub 2011 Aug 24.


P-body components, Dhh1 and Pat1, are involved in tRNA nuclear-cytoplasmic dynamics.

Hurto RL, Hopper AK.

RNA. 2011 May;17(5):912-24. doi: 10.1261/rna.2558511. Epub 2011 Mar 11.


tRNA biology charges to the front.

Phizicky EM, Hopper AK.

Genes Dev. 2010 Sep 1;24(17):1832-60. doi: 10.1101/gad.1956510. Review.


Regulation of tRNA bidirectional nuclear-cytoplasmic trafficking in Saccharomyces cerevisiae.

Murthi A, Shaheen HH, Huang HY, Preston MA, Lai TP, Phizicky EM, Hopper AK.

Mol Biol Cell. 2010 Feb 15;21(4):639-49. doi: 10.1091/mbc.E09-07-0551. Epub 2009 Dec 23.


Cellular dynamics of tRNAs and their genes.

Hopper AK, Pai DA, Engelke DR.

FEBS Lett. 2010 Jan 21;584(2):310-7. doi: 10.1016/j.febslet.2009.11.053. Review.


Mechanism and a peptide motif for targeting peripheral proteins to the yeast inner nuclear membrane.

Lai TP, Stauffer KA, Murthi A, Shaheen HH, Peng G, Martin NC, Hopper AK.

Traffic. 2009 Sep;10(9):1243-56. doi: 10.1111/j.1600-0854.2009.00956.x. Epub 2009 Jun 15.


A decade of surprises for tRNA nuclear-cytoplasmic dynamics.

Hopper AK, Shaheen HH.

Trends Cell Biol. 2008 Mar;18(3):98-104. doi: 10.1016/j.tcb.2008.01.001. Epub 2008 Feb 11. Review.


tRNA traffic meets a cell-cycle checkpoint.

Weinert T, Hopper AK.

Cell. 2007 Nov 30;131(5):838-40.


Retrograde nuclear accumulation of cytoplasmic tRNA in rat hepatoma cells in response to amino acid deprivation.

Shaheen HH, Horetsky RL, Kimball SR, Murthi A, Jefferson LS, Hopper AK.

Proc Natl Acad Sci U S A. 2007 May 22;104(21):8845-50. Epub 2007 May 14.


Rapid and reversible nuclear accumulation of cytoplasmic tRNA in response to nutrient availability.

Whitney ML, Hurto RL, Shaheen HH, Hopper AK.

Mol Biol Cell. 2007 Jul;18(7):2678-86. Epub 2007 May 2.


Inorganic phosphate deprivation causes tRNA nuclear accumulation via retrograde transport in Saccharomyces cerevisiae.

Hurto RL, Tong AH, Boone C, Hopper AK.

Genetics. 2007 Jun;176(2):841-52. Epub 2007 Apr 3.


Cellular dynamics of small RNAs.

Hopper AK.

Crit Rev Biochem Mol Biol. 2006 Jan-Feb;41(1):3-19. Review.


Importin-beta family members mediate alpharetrovirus gag nuclear entry via interactions with matrix and nucleocapsid.

Butterfield-Gerson KL, Scheifele LZ, Ryan EP, Hopper AK, Parent LJ.

J Virol. 2006 Feb;80(4):1798-806.


Modified view of tRNA: stability amid sequence diversity.

Engelke DR, Hopper AK.

Mol Cell. 2006 Jan 20;21(2):144-5. Review.


Rsp5 ubiquitin ligase modulates translation accuracy in yeast Saccharomyces cerevisiae.

Kwapisz M, Cholbinski P, Hopper AK, Rousset JP, Zoladek T.

RNA. 2005 Nov;11(11):1710-8. Epub 2005 Sep 21. Erratum in: RNA. 2006 Mar;12(3):530.


Depletion of Saccharomyces cerevisiae tRNA(His) guanylyltransferase Thg1p leads to uncharged tRNAHis with additional m(5)C.

Gu W, Hurto RL, Hopper AK, Grayhack EJ, Phizicky EM.

Mol Cell Biol. 2005 Sep;25(18):8191-201.


Retrograde movement of tRNAs from the cytoplasm to the nucleus in Saccharomyces cerevisiae.

Shaheen HH, Hopper AK.

Proc Natl Acad Sci U S A. 2005 Aug 9;102(32):11290-5. Epub 2005 Jul 22.


Division of labor among the yeast Sol proteins implicated in tRNA nuclear export and carbohydrate metabolism.

Stanford DR, Whitney ML, Hurto RL, Eisaman DM, Shen WC, Hopper AK.

Genetics. 2004 Sep;168(1):117-27.


tRNA transfers to the limelight.

Hopper AK, Phizicky EM.

Genes Dev. 2003 Jan 15;17(2):162-80. Review. No abstract available.


Rsp5p, a new link between the actin cytoskeleton and endocytosis in the yeast Saccharomyces cerevisiae.

Kamińska J, Gajewska B, Hopper AK, Zoładek T.

Mol Cell Biol. 2002 Oct;22(20):6946-8.


A Los1p-independent pathway for nuclear export of intronless tRNAs in Saccharomycescerevisiae.

Feng W, Hopper AK.

Proc Natl Acad Sci U S A. 2002 Apr 16;99(8):5412-7.


Maf1p, a negative effector of RNA polymerase III in Saccharomyces cerevisiae.

Pluta K, Lefebvre O, Martin NC, Smagowicz WJ, Stanford DR, Ellis SR, Hopper AK, Sentenac A, Boguta M.

Mol Cell Biol. 2001 Aug;21(15):5031-40.


Role of nuclear pools of aminoacyl-tRNA synthetases in tRNA nuclear export.

Azad AK, Stanford DR, Sarkar S, Hopper AK.

Mol Biol Cell. 2001 May;12(5):1381-92.

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