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Mining new sources of natural history observations for disease interactions.

Kido A, Hood ME.

Am J Bot. 2020 Jan;107(1):3-11. doi: 10.1002/ajb2.1409. Epub 2019 Dec 29. No abstract available.


Trends in opioid use disorder and overdose among opioid-naive individuals receiving an opioid prescription in Massachusetts from 2011 to 2014.

Burke LG, Zhou X, Boyle KL, Orav EJ, Bernson D, Hood ME, Land T, Bharel M, Frakt AB.

Addiction. 2019 Nov 6. doi: 10.1111/add.14867. [Epub ahead of print]


Higher gene flow in sex-related chromosomes than in autosomes during fungal divergence.

Hartmann FE, Rodríguez de la Vega RC, Gladieux P, Ma WJ, Hood ME, Giraud T.

Mol Biol Evol. 2019 Oct 25. pii: msz252. doi: 10.1093/molbev/msz252. [Epub ahead of print]


Understanding Adaptation, Coevolution, Host Specialization, and Mating System in Castrating Anther-Smut Fungi by Combining Population and Comparative Genomics.

Hartmann FE, Rodríguez de la Vega RC, Carpentier F, Gladieux P, Cornille A, Hood ME, Giraud T.

Annu Rev Phytopathol. 2019 Aug 25;57:431-457. doi: 10.1146/annurev-phyto-082718-095947. Epub 2019 Jul 23.


Sympatry and interference of divergent Microbotryum pathogen species.

Hood ME, Antonovics J, Wolf M, Stern ZL, Giraud T, Abbate JL.

Ecol Evol. 2019 Apr 12;9(9):5457-5467. doi: 10.1002/ece3.5140. eCollection 2019 May.


Convergent recombination cessation between mating-type genes and centromeres in selfing anther-smut fungi.

Carpentier F, Rodríguez de la Vega RC, Branco S, Snirc A, Coelho MA, Hood ME, Giraud T.

Genome Res. 2019 Jun;29(6):944-953. doi: 10.1101/gr.242578.118. Epub 2019 May 1.


Specificity and seasonal prevalence of anther smut disease Microbotryum on sympatric Himalayan Silene species.

Tang H, Hood ME, Ren ZX, Li HD, Zhao YH, Wolfe LM, Li DZ, Wang H.

J Evol Biol. 2019 May;32(5):451-462. doi: 10.1111/jeb.13427. Epub 2019 Mar 4.


The role of infectious disease in the evolution of females: Evidence from anther-smut disease on a gynodioecious alpine carnation.

Bruns EL, Miller I, Hood ME, Carasso V, Antonovics J.

Evolution. 2019 Mar;73(3):497-510. doi: 10.1111/evo.13640. Epub 2018 Nov 28.


Multiple infections, relatedness and virulence in the anther-smut fungus castrating Saponaria plants.

Fortuna TM, Namias A, Snirc A, Branca A, Hood ME, Raquin C, Shykoff JA, Giraud T.

Mol Ecol. 2018 Dec;27(23):4947-4959. doi: 10.1111/mec.14911. Epub 2018 Nov 22.


Co-occurrence among three divergent plant-castrating fungi in the same Silene host species.

Abbate JL, Gladieux P, Hood ME, de Vienne DM, Antonovics J, Snirc A, Giraud T.

Mol Ecol. 2018 Jul 21. doi: 10.1111/mec.14805. [Epub ahead of print]


Effect of the anther-smut fungus Microbotryum on the juvenile growth of its host Silene latifolia.

Antonovics J, Abbate JL, Bruns EL, Fields PD, Forrester NJ, Gilbert KJ, Hood ME, Park T, Taylor DR.

Am J Bot. 2018 Jun;105(6):1088-1095. doi: 10.1002/ajb2.1114. Epub 2018 Jul 11.


Multiple convergent supergene evolution events in mating-type chromosomes.

Branco S, Carpentier F, Rodríguez de la Vega RC, Badouin H, Snirc A, Le Prieur S, Coelho MA, de Vienne DM, Hartmann FE, Begerow D, Hood ME, Giraud T.

Nat Commun. 2018 May 21;9(1):2000. doi: 10.1038/s41467-018-04380-9.


Evolutionary strata on young mating-type chromosomes despite the lack of sexual antagonism.

Branco S, Badouin H, Rodríguez de la Vega RC, Gouzy J, Carpentier F, Aguileta G, Siguenza S, Brandenburg JT, Coelho MA, Hood ME, Giraud T.

Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):7067-7072. doi: 10.1073/pnas.1701658114. Epub 2017 Jun 19.


Fungal Sex: The Basidiomycota.

Coelho MA, Bakkeren G, Sun S, Hood ME, Giraud T.

Microbiol Spectr. 2017 Jun;5(3). doi: 10.1128/microbiolspec.FUNK-0046-2016. Review.


Maternal Racial and Ethnic Disparities in Neonatal Birth Outcomes With and Without Assisted Reproduction.

Crawford S, Joshi N, Boulet SL, Bailey MA, Hood ME, Manning SE, McKane P, Kirby RS, Kissin DM, Jamieson DJ; States Monitoring Assisted Reproductive Technology (SMART) Collaborative.

Obstet Gynecol. 2017 Jun;129(6):1022-1030. doi: 10.1097/AOG.0000000000002031.


Co-occurrence and hybridization of anther-smut pathogens specialized on Dianthus hosts.

Petit E, Silver C, Cornille A, Gladieux P, Rosenthal L, Bruns E, Yee S, Antonovics J, Giraud T, Hood ME.

Mol Ecol. 2017 Apr;26(7):1877-1890. doi: 10.1111/mec.14073. Epub 2017 Mar 22.


Massive Expansion of Gypsy-Like Retrotransposons in Microbotryum Fungi.

Horns F, Petit E, Hood ME.

Genome Biol Evol. 2017 Feb 1;9(2):363-371. doi: 10.1093/gbe/evx011.


Strong phylogeographic co-structure between the anther-smut fungus and its white campion host.

Feurtey A, Gladieux P, Hood ME, Snirc A, Cornille A, Rosenthal L, Giraud T.

New Phytol. 2016 Nov;212(3):668-679. doi: 10.1111/nph.14125. Epub 2016 Aug 8.


Assisted reproductive technology and perinatal outcomes: conventional versus discordant-sibling design.

Dhalwani NN, Boulet SL, Kissin DM, Zhang Y, McKane P, Bailey MA, Hood ME, Tata LJ.

Fertil Steril. 2016 Sep 1;106(3):710-716.e2. doi: 10.1016/j.fertnstert.2016.04.038. Epub 2016 May 14.


Lower prevalence but similar fitness in a parasitic fungus at higher radiation levels near Chernobyl.

Aguileta G, Badouin H, Hood ME, Møller AP, Le Prieur S, Snirc A, Siguenza S, Mousseau TA, Shykoff JA, Cuomo CA, Giraud T.

Mol Ecol. 2016 Jul;25(14):3370-83. doi: 10.1111/mec.13675. Epub 2016 Jun 6.


Contrasted patterns in mating-type chromosomes in fungi: hotspots versus coldspots of recombination.

Idnurm A, Hood ME, Johannesson H, Giraud T.

Fungal Biol Rev. 2015 Dec 1;29(3-4):220-229.


Distribution and population structure of the anther smut Microbotryum silenes-acaulis parasitizing an arctic-alpine plant.

Bueker B, Eberlein C, Gladieux P, Schaefer A, Snirc A, Bennett DJ, Begerow D, Hood ME, Giraud T.

Mol Ecol. 2016 Feb;25(3):811-24. doi: 10.1111/mec.13512.


Breaking linkage between mating compatibility factors: Tetrapolarity in Microbotryum.

Hood ME, Scott M, Hwang M.

Evolution. 2015 Oct;69(10):2561-72. doi: 10.1111/evo.12765. Epub 2015 Sep 24.


Variation in mate-recognition pheromones of the fungal genus Microbotryum.

Xu L, Petit E, Hood ME.

Heredity (Edinb). 2016 Jan;116(1):44-51. doi: 10.1038/hdy.2015.68. Epub 2015 Aug 26.


Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus.

Perlin MH, Amselem J, Fontanillas E, Toh SS, Chen Z, Goldberg J, Duplessis S, Henrissat B, Young S, Zeng Q, Aguileta G, Petit E, Badouin H, Andrews J, Razeeq D, Gabaldón T, Quesneville H, Giraud T, Hood ME, Schultz DJ, Cuomo CA.

BMC Genomics. 2015 Jun 16;16:461. doi: 10.1186/s12864-015-1660-8.


Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae.

Badouin H, Hood ME, Gouzy J, Aguileta G, Siguenza S, Perlin MH, Cuomo CA, Fairhead C, Branca A, Giraud T.

Genetics. 2015 Aug;200(4):1275-84. doi: 10.1534/genetics.115.177709. Epub 2015 Jun 3.


Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi.

Fontanillas E, Hood ME, Badouin H, Petit E, Barbe V, Gouzy J, de Vienne DM, Aguileta G, Poulain J, Wincker P, Chen Z, Toh SS, Cuomo CA, Perlin MH, Gladieux P, Giraud T.

Mol Biol Evol. 2015 Apr;32(4):928-43. doi: 10.1093/molbev/msu396. Epub 2014 Dec 21.


HIV and hepatitis C mortality in Massachusetts, 2002-2011: spatial cluster and trend analysis of HIV and HCV using multiple cause of death.

Meyers DJ, Hood ME, Stopka TJ.

PLoS One. 2014 Dec 11;9(12):e114822. doi: 10.1371/journal.pone.0114822. eCollection 2014.


Rate of resistance evolution and polymorphism in long- and short-lived hosts.

Bruns E, Hood ME, Antonovics J.

Evolution. 2015 Feb;69(2):551-60. doi: 10.1111/evo.12577. Epub 2015 Jan 19.


The population biology of fungal invasions.

Gladieux P, Feurtey A, Hood ME, Snirc A, Clavel J, Dutech C, Roy M, Giraud T.

Mol Ecol. 2015 May;24(9):1969-86. doi: 10.1111/mec.13028. Epub 2015 Jan 7. Review.


High variability of mitochondrial gene order among fungi.

Aguileta G, de Vienne DM, Ross ON, Hood ME, Giraud T, Petit E, Gabaldón T.

Genome Biol Evol. 2014 Feb;6(2):451-65. doi: 10.1093/gbe/evu028.


Experimental hybridization and backcrossing reveal forces of reproductive isolation in Microbotryum.

Büker B, Petit E, Begerow D, Hood ME.

BMC Evol Biol. 2013 Oct 10;13:224. doi: 10.1186/1471-2148-13-224.


Evolution of uni- and bifactorial sexual compatibility systems in fungi.

Nieuwenhuis BP, Billiard S, Vuilleumier S, Petit E, Hood ME, Giraud T.

Heredity (Edinb). 2013 Dec;111(6):445-55. doi: 10.1038/hdy.2013.67. Epub 2013 Jul 10. Review.


Life-history strategy defends against disease and may select against physiological resistance.

Gibson AK, Petit E, Mena-Ali J, Oxelman B, Hood ME.

Ecol Evol. 2013 Jun;3(6):1741-50. doi: 10.1002/ece3.583. Epub 2013 May 8.


Cospeciation vs host-shift speciation: methods for testing, evidence from natural associations and relation to coevolution.

de Vienne DM, Refrégier G, López-Villavicencio M, Tellier A, Hood ME, Giraud T.

New Phytol. 2013 Apr;198(2):347-85. doi: 10.1111/nph.12150. Epub 2013 Feb 25. Review.


History of the invasion of the anther smut pathogen on Silene latifolia in North America.

Fontaine MC, Gladieux P, Hood ME, Giraud T.

New Phytol. 2013 May;198(3):946-56. doi: 10.1111/nph.12177. Epub 2013 Feb 13.


Extensive divergence between mating-type chromosomes of the anther-smut fungus.

Hood ME, Petit E, Giraud T.

Genetics. 2013 Jan;193(1):309-15. doi: 10.1534/genetics.112.146266. Epub 2012 Nov 12.


Variation in resistance to multiple pathogen species: anther smuts of Silene uniflora.

Chung E, Petit E, Antonovics J, Pedersen AB, Hood ME.

Ecol Evol. 2012 Sep;2(9):2304-14. doi: 10.1002/ece3.346. Epub 2012 Aug 13.


Linkage to the mating-type locus across the genus Microbotryum: insights into nonrecombining chromosomes.

Petit E, Giraud T, de Vienne DM, Coelho MA, Aguileta G, Amselem J, Kreplak J, Poulain J, Gavory F, Wincker P, Young SK, Cuomo C, Perlin MH, Hood ME.

Evolution. 2012 Nov;66(11):3519-33. doi: 10.1111/j.1558-5646.2012.01703.x. Epub 2012 Jun 26.


The evolution of disease resistance and tolerance in spatially structured populations.

Horns F, Hood ME.

Ecol Evol. 2012 Jul;2(7):1705-11. doi: 10.1002/ece3.290.


Sibling competition arena: selfing and a competition arena can combine to constitute a barrier to gene flow in sympatry.

Gibson AK, Hood ME, Giraud T.

Evolution. 2012 Jun;66(6):1917-30. doi: 10.1111/j.1558-5646.2011.01563.x. Epub 2012 Mar 3.


Sex, outcrossing and mating types: unsolved questions in fungi and beyond.

Billiard S, López-Villavicencio M, Hood ME, Giraud T.

J Evol Biol. 2012 Jun;25(6):1020-38. doi: 10.1111/j.1420-9101.2012.02495.x. Epub 2012 Apr 20. Review.


Patterns of repeat-induced point mutation in transposable elements of basidiomycete fungi.

Horns F, Petit E, Yockteng R, Hood ME.

Genome Biol Evol. 2012;4(3):240-7. doi: 10.1093/gbe/evs005. Epub 2012 Jan 16.


Having sex, yes, but with whom? Inferences from fungi on the evolution of anisogamy and mating types.

Billiard S, López-Villavicencio M, Devier B, Hood ME, Fairhead C, Giraud T.

Biol Rev Camb Philos Soc. 2011 May;86(2):421-42. doi: 10.1111/j.1469-185X.2010.00153.x. Epub 2010 Aug 16. Review.


Glacial refugia in pathogens: European genetic structure of anther smut pathogens on Silene latifolia and Silene dioica.

Vercken E, Fontaine MC, Gladieux P, Hood ME, Jonot O, Giraud T.

PLoS Pathog. 2010 Dec 16;6(12):e1001229. doi: 10.1371/journal.ppat.1001229.


Competition, cooperation among kin, and virulence in multiple infections.

López-Villavicencio M, Courjol F, Gibson AK, Hood ME, Jonot O, Shykoff JA, Giraud T.

Evolution. 2011 May;65(5):1357-66. doi: 10.1111/j.1558-5646.2010.01207.x. Epub 2010 Dec 24.


Maintenance of fungal pathogen species that are specialized to different hosts: allopatric divergence and introgression through secondary contact.

Gladieux P, Vercken E, Fontaine MC, Hood ME, Jonot O, Couloux A, Giraud T.

Mol Biol Evol. 2011 Jan;28(1):459-71. doi: 10.1093/molbev/msq235. Epub 2010 Sep 13.


Dynamic linkage relationships to the mating-type locus in automictic fungi of the genus Microbotryum.

Abbate JL, Hood ME.

J Evol Biol. 2010 Aug;23(8):1800-5. doi: 10.1111/j.1420-9101.2010.02036.x. Epub 2010 Jun 18.


Distribution of the anther-smut pathogen Microbotryum on species of the Caryophyllaceae.

Hood ME, Mena-Alí JI, Gibson AK, Oxelman B, Giraud T, Yockteng R, Arroyo MT, Conti F, Pedersen AB, Gladieux P, Antonovics J.

New Phytol. 2010 Jul;187(1):217-29. doi: 10.1111/j.1469-8137.2010.03268.x. Epub 2010 Apr 12.

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