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Pharmacotherapeutic management of co-morbid alcohol and opioid use.

Hood LE, Leyrer-Jackson JM, Olive MF.

Expert Opin Pharmacother. 2020 Feb 27:1-17. doi: 10.1080/14656566.2020.1732349. [Epub ahead of print]


Taking Systems Medicine to Heart.

Trachana K, Bargaje R, Glusman G, Price ND, Huang S, Hood LE.

Circ Res. 2018 Apr 27;122(9):1276-1289. doi: 10.1161/CIRCRESAHA.117.310999. Review.


Transcriptional regulatory networks underlying gene expression changes in Huntington's disease.

Ament SA, Pearl JR, Cantle JP, Bragg RM, Skene PJ, Coffey SR, Bergey DE, Wheeler VC, MacDonald ME, Baliga NS, Rosinski J, Hood LE, Carroll JB, Price ND.

Mol Syst Biol. 2018 Mar 26;14(3):e7435. doi: 10.15252/msb.20167435.


Lessons Learned as President of the Institute for Systems Biology (2000-2018).

Hood LE.

Genomics Proteomics Bioinformatics. 2018 Feb;16(1):1-9. doi: 10.1016/j.gpb.2018.02.002. Epub 2018 Mar 2. No abstract available.


Human Gut Microbiota and Gastrointestinal Cancer.

Meng C, Bai C, Brown TD, Hood LE, Tian Q.

Genomics Proteomics Bioinformatics. 2018 Feb;16(1):33-49. doi: 10.1016/j.gpb.2017.06.002. Epub 2018 Feb 21. Review.


Ultrafast Comparison of Personal Genomes via Precomputed Genome Fingerprints.

Glusman G, Mauldin DE, Hood LE, Robinson M.

Front Genet. 2017 Sep 26;8:136. doi: 10.3389/fgene.2017.00136. eCollection 2017.


The rs16906252:C>T SNP is not associated with increased overall survival or temozolomide response in a Han-Chinese glioma cohort.

Wei KC, Chen CY, Feng LY, Huang WT, Chen CH, Hsu PW, Wang K, Hood LE, Chen LY.

PLoS One. 2017 Jun 2;12(6):e0178842. doi: 10.1371/journal.pone.0178842. eCollection 2017.


High resolution time-course mapping of early transcriptomic, molecular and cellular phenotypes in Huntington's disease CAG knock-in mice across multiple genetic backgrounds.

Ament SA, Pearl JR, Grindeland A, St Claire J, Earls JC, Kovalenko M, Gillis T, Mysore J, Gusella JF, Lee JM, Kwak S, Howland D, Lee MY, Baxter D, Scherler K, Wang K, Geman D, Carroll JB, MacDonald ME, Carlson G, Wheeler VC, Price ND, Hood LE.

Hum Mol Genet. 2017 Mar 1;26(5):913-922. doi: 10.1093/hmg/ddx006.


Immediate early gene expression reveals interactions between social and nicotine rewards on brain activity in adolescent male rats.

Bastle RM, Peartree NA, Goenaga J, Hatch KN, Henricks A, Scott S, Hood LE, Neisewander JL.

Behav Brain Res. 2016 Oct 15;313:244-254. doi: 10.1016/j.bbr.2016.07.024. Epub 2016 Jul 18.


A Common Phenotype Polymorphism in Mammalian Brains Defined by Concomitant Production of Prolactin and Growth Hormone.

Daude N, Lee I, Kim TK, Janus C, Glaves JP, Gapeshina H, Yang J, Sykes BD, Carlson GA, Hood LE, Westaway D.

PLoS One. 2016 Feb 19;11(2):e0149410. doi: 10.1371/journal.pone.0149410. eCollection 2016.


Disrupted SOX10 function causes spongiform neurodegeneration in gray tremor mice.

Anderson SR, Lee I, Ebeling C, Stephenson DA, Schweitzer KM, Baxter D, Moon TM, LaPierre S, Jaques B, Silvius D, Wegner M, Hood LE, Carlson G, Gunn TM.

Mamm Genome. 2015 Feb;26(1-2):80-93. doi: 10.1007/s00335-014-9548-5. Epub 2014 Nov 16.


Every life has equal value.

Hood LE, Lazowska ED.

Cell. 2013 Sep 12;154(6):1178-9. doi: 10.1016/j.cell.2013.08.046.


Positive Allosteric Modulation of mGluR5 Accelerates Extinction Learning but Not Relearning Following Methamphetamine Self-Administration.

Kufahl PR, Hood LE, Nemirovsky NE, Barabas P, Halstengard C, Villa A, Moore E, Watterson LR, Olive MF.

Front Pharmacol. 2012 Nov 26;3:194. doi: 10.3389/fphar.2012.00194. eCollection 2012.


Attenuation of reinstatement of methamphetamine-, sucrose-, and food-seeking behavior in rats by fenobam, a metabotropic glutamate receptor 5 negative allosteric modulator.

Watterson LR, Kufahl PR, Nemirovsky NE, Sewalia K, Hood LE, Olive MF.

Psychopharmacology (Berl). 2013 Jan;225(1):151-9. doi: 10.1007/s00213-012-2804-z. Epub 2012 Jul 21.


New and improved proteomics technologies for understanding complex biological systems: addressing a grand challenge in the life sciences.

Hood LE, Omenn GS, Moritz RL, Aebersold R, Yamamoto KR, Amos M, Hunter-Cevera J, Locascio L; Workshop Participants.

Proteomics. 2012 Sep;12(18):2773-83. doi: 10.1002/pmic.201270086.


Attenuation of methamphetamine seeking by the mGluR2/3 agonist LY379268 in rats with histories of restricted and escalated self-administration.

Kufahl PR, Watterson LR, Nemirovsky NE, Hood LE, Villa A, Halstengard C, Zautra N, Olive MF.

Neuropharmacology. 2013 Mar;66:290-301. doi: 10.1016/j.neuropharm.2012.05.037. Epub 2012 May 31.


mGluR5 receptors in the basolateral amygdala and nucleus accumbens regulate cue-induced reinstatement of ethanol-seeking behavior.

Sinclair CM, Cleva RM, Hood LE, Olive MF, Gass JT.

Pharmacol Biochem Behav. 2012 May;101(3):329-35. doi: 10.1016/j.pbb.2012.01.014. Epub 2012 Jan 24.


RNASEQR--a streamlined and accurate RNA-seq sequence analysis program.

Chen LY, Wei KC, Huang AC, Wang K, Huang CY, Yi D, Tang CY, Galas DJ, Hood LE.

Nucleic Acids Res. 2012 Mar;40(6):e42. doi: 10.1093/nar/gkr1248. Epub 2011 Dec 22.


Limited physical contact through a mesh barrier is sufficient for social reward-conditioned place preference in adolescent male rats.

Peartree NA, Hood LE, Thiel KJ, Sanabria F, Pentkowski NS, Chandler KN, Neisewander JL.

Physiol Behav. 2012 Feb 1;105(3):749-56. doi: 10.1016/j.physbeh.2011.10.001. Epub 2011 Oct 8.


QnAs with Leroy E. Hood. Interview by Prashant Nair.

Hood LE.

Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9325. doi: 10.1073/pnas.1105859108. Epub 2011 May 2. No abstract available.


MicroRNA as biomarkers and regulators in B-cell chronic lymphocytic leukemia.

Moussay E, Wang K, Cho JH, van Moer K, Pierson S, Paggetti J, Nazarov PV, Palissot V, Hood LE, Berchem G, Galas DJ.

Proc Natl Acad Sci U S A. 2011 Apr 19;108(16):6573-8. doi: 10.1073/pnas.1019557108. Epub 2011 Apr 1.


A CD133-related gene expression signature identifies an aggressive glioblastoma subtype with excessive mutations.

Yan X, Ma L, Yi D, Yoon JG, Diercks A, Foltz G, Price ND, Hood LE, Tian Q.

Proc Natl Acad Sci U S A. 2011 Jan 25;108(4):1591-6. doi: 10.1073/pnas.1018696108. Epub 2011 Jan 10.


The interactive effects of environmental enrichment and extinction interventions in attenuating cue-elicited cocaine-seeking behavior in rats.

Thiel KJ, Engelhardt B, Hood LE, Peartree NA, Neisewander JL.

Pharmacol Biochem Behav. 2011 Jan;97(3):595-602. doi: 10.1016/j.pbb.2010.09.014. Epub 2010 Sep 30.


Gene expression relationship between prostate cancer cells of Gleason 3, 4 and normal epithelial cells as revealed by cell type-specific transcriptomes.

Pascal LE, VĂȘncio RZ, Page LS, Liebeskind ES, Shadle CP, Troisch P, Marzolf B, True LD, Hood LE, Liu AY.

BMC Cancer. 2009 Dec 18;9:452. doi: 10.1186/1471-2407-9-452.


A systems approach to prion disease.

Hwang D, Lee IY, Yoo H, Gehlenborg N, Cho JH, Petritis B, Baxter D, Pitstick R, Young R, Spicer D, Price ND, Hohmann JG, Dearmond SJ, Carlson GA, Hood LE.

Mol Syst Biol. 2009;5:252. doi: 10.1038/msb.2009.10. Epub 2009 Mar 24.


Circulating microRNAs, potential biomarkers for drug-induced liver injury.

Wang K, Zhang S, Marzolf B, Troisch P, Brightman A, Hu Z, Hood LE, Galas DJ.

Proc Natl Acad Sci U S A. 2009 Mar 17;106(11):4402-7. doi: 10.1073/pnas.0813371106. Epub 2009 Feb 25.


Wu and Kabat 1970: a transforming view of antibody diversity.

Hood LE.

J Immunol. 2008 Jun 1;180(11):7055-6. No abstract available.


Gene expression dynamics in the macrophage exhibit criticality.

Nykter M, Price ND, Aldana M, Ramsey SA, Kauffman SA, Hood LE, Yli-Harja O, Shmulevich I.

Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):1897-900. doi: 10.1073/pnas.0711525105. Epub 2008 Feb 4.


Learning to care for spiritual needs: connecting spiritually.

Hood LE, Olson JK, Allen M.

Qual Health Res. 2007 Nov;17(9):1198-206.


Transcription factor expression in lipopolysaccharide-activated peripheral-blood-derived mononuclear cells.

Roach JC, Smith KD, Strobe KL, Nissen SM, Haudenschild CD, Zhou D, Vasicek TJ, Held GA, Stolovitzky GA, Hood LE, Aderem A.

Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16245-50. Epub 2007 Oct 3.


Virtual reality: a distraction intervention for chemotherapy.

Schneider SM, Hood LE.

Oncol Nurs Forum. 2007 Jan;34(1):39-46.


Putting evidence into practice: evidence-based interventions for fatigue during and following cancer and its treatment.

Mitchell SA, Beck SL, Hood LE, Moore K, Tanner ER.

Clin J Oncol Nurs. 2007 Feb;11(1):99-113. Review. Update in: Clin J Oncol Nurs. 2014;18 Suppl:38-58.


General transcription factor specified global gene regulation in archaea.

Facciotti MT, Reiss DJ, Pan M, Kaur A, Vuthoori M, Bonneau R, Shannon P, Srivastava A, Donohoe SM, Hood LE, Baliga NS.

Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4630-5. Epub 2007 Mar 7.


Printing your own inkjet microarrays.

Lausted CG, Warren CB, Hood LE, Lasky SR.

Methods Enzymol. 2006;410:168-89. Review.


The evolution of vertebrate Toll-like receptors.

Roach JC, Glusman G, Rowen L, Kaur A, Purcell MK, Smith KD, Hood LE, Aderem A.

Proc Natl Acad Sci U S A. 2005 Jul 5;102(27):9577-82. Epub 2005 Jun 23.


Integrated genomic and proteomic analyses of gene expression in Mammalian cells.

Tian Q, Stepaniants SB, Mao M, Weng L, Feetham MC, Doyle MJ, Yi EC, Dai H, Thorsson V, Eng J, Goodlett D, Berger JP, Gunter B, Linseley PS, Stoughton RB, Aebersold R, Collins SJ, Hanlon WA, Hood LE.

Mol Cell Proteomics. 2004 Oct;3(10):960-9. Epub 2004 Jul 6.


Lineage relationship between LNCaP and LNCaP-derived prostate cancer cell lines.

Liu AY, Brubaker KD, Goo YA, Quinn JE, Kral S, Sorensen CM, Vessella RL, Belldegrun AS, Hood LE.

Prostate. 2004 Jul 1;60(2):98-108.


Chemotherapy in the elderly: supportive measures for chemotherapy-induced myelotoxicity.

Hood LE.

Clin J Oncol Nurs. 2003 Mar-Apr;7(2):185-90. Review.


Testing for differentially-expressed genes by maximum-likelihood analysis of microarray data.

Ideker T, Thorsson V, Siegel AF, Hood LE.

J Comput Biol. 2000;7(6):805-17.


Equipping scientists for the new biology.

Aebersold R, Hood LE, Watts JD.

Nat Biotechnol. 2000 Apr;18(4):359. No abstract available.


Ataxia in prion protein (PrP)-deficient mice is associated with upregulation of the novel PrP-like protein doppel.

Moore RC, Lee IY, Silverman GL, Harrison PM, Strome R, Heinrich C, Karunaratne A, Pasternak SH, Chishti MA, Liang Y, Mastrangelo P, Wang K, Smit AF, Katamine S, Carlson GA, Cohen FE, Prusiner SB, Melton DW, Tremblay P, Hood LE, Westaway D.

J Mol Biol. 1999 Oct 1;292(4):797-817.


T-cell receptor vbeta deletion and valpha polymorphism are responsible for the resistance of SWR mouse to arthritis induction.

Osman GE, Hannibal MC, Anderson JP, Cheunsuk S, Lasky SR, Liggitt HD, Ladiges WC, Hood LE.

Immunogenetics. 1999 Aug;49(9):764-72.


Expression of a type II collagen-specific TCR transgene accelerates the onset of arthritis in mice.

Osman GE, Cheunsuk S, Allen SE, Chi E, Liggitt HD, Hood LE, Ladiges WC.

Int Immunol. 1998 Nov;10(11):1613-22.


OPG/FDCR-1, a TNF receptor family member, is expressed in lymphoid cells and is up-regulated by ligating CD40.

Yun TJ, Chaudhary PM, Shu GL, Frazer JK, Ewings MK, Schwartz SM, Pascual V, Hood LE, Clark EA.

J Immunol. 1998 Dec 1;161(11):6113-21.


Complete genomic sequence and analysis of the prion protein gene region from three mammalian species.

Lee IY, Westaway D, Smit AF, Wang K, Seto J, Chen L, Acharya C, Ankener M, Baskin D, Cooper C, Yao H, Prusiner SB, Hood LE.

Genome Res. 1998 Oct;8(10):1022-37.


Rapid detection of bovine type II collagen-specific T-cell hybridomas.

Varma CK, Li SW, Hood LE, Ladiges W, Osman GE.

Hybridoma. 1997 Jun;16(3):287-90.


SWR: an inbred strain suitable for generating transgenic mice.

Osman GE, Jacobson DP, Li SW, Hood LE, Liggitt HD, Ladiges WC.

Lab Anim Sci. 1997 Apr;47(2):167-71.


Characterization of the mouse Tcra-V22 gene subfamily.

Dattamajumdar AK, Li SW, Jacobson DP, Ladiges W, Hood LE, Osman GE.

Immunogenetics. 1996;44(6):432-40.


Rapid cloning of any rearranged mouse immunoglobulin variable genes.

Dattamajumdar AK, Jacobson DP, Hood LE, Osman GE.

Immunogenetics. 1996;43(3):141-51.


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