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Items: 44

1.

Transgressive segregation reveals mechanisms of Arabidopsis immunity to Brassica-infecting races of white rust (Albugo candida).

Cevik V, Boutrot F, Apel W, Robert-Seilaniantz A, Furzer OJ, Redkar A, Castel B, Kover PX, Prince DC, Holub EB, Jones JDG.

Proc Natl Acad Sci U S A. 2019 Feb 12;116(7):2767-2773. doi: 10.1073/pnas.1812911116. Epub 2019 Jan 28.

2.

Restriction associated DNA-genotyping at multiple spatial scales in Arabidopsis lyrata reveals signatures of pathogen-mediated selection.

Buckley J, Holub EB, Koch MA, Vergeer P, Mable BK.

BMC Genomics. 2018 Jun 27;19(1):496. doi: 10.1186/s12864-018-4806-7.

3.

Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium).

Hulin MT, Armitage AD, Vicente JG, Holub EB, Baxter L, Bates HJ, Mansfield JW, Jackson RW, Harrison RJ.

New Phytol. 2018 Jul;219(2):672-696. doi: 10.1111/nph.15182. Epub 2018 May 4.

4.

A Suppressor/Avirulence Gene Combination in Hyaloperonospora arabidopsidis Determines Race Specificity in Arabidopsis thaliana.

Woods-Tör A, Studholme DJ, Cevik V, Telli O, Holub EB, Tör M.

Front Plant Sci. 2018 Mar 1;9:265. doi: 10.3389/fpls.2018.00265. eCollection 2018.

5.

Pathogenic, phenotypic and molecular characterisation of Xanthomonas nasturtii sp. nov. and Xanthomonas floridensis sp. nov., new species of Xanthomonas associated with watercress production in Florida.

Vicente JG, Rothwell S, Holub EB, Studholme DJ.

Int J Syst Evol Microbiol. 2017 Sep;67(9):3645-3654. doi: 10.1099/ijsem.0.002189. Epub 2017 Aug 25.

PMID:
28840805
6.

Genome-Wide Linkage and Association Mapping of Halo Blight Resistance in Common Bean to Race 6 of the Globally Important Bacterial Pathogen.

Tock AJ, Fourie D, Walley PG, Holub EB, Soler A, Cichy KA, Pastor-Corrales MA, Song Q, Porch TG, Hart JP, Vasconcellos RCC, Vicente JG, Barker GC, Miklas PN.

Front Plant Sci. 2017 Jul 7;8:1170. doi: 10.3389/fpls.2017.01170. eCollection 2017.

7.

Albugo-imposed changes to tryptophan-derived antimicrobial metabolite biosynthesis may contribute to suppression of non-host resistance to Phytophthora infestans in Arabidopsis thaliana.

Prince DC, Rallapalli G, Xu D, Schoonbeek HJ, Çevik V, Asai S, Kemen E, Cruz-Mireles N, Kemen A, Belhaj K, Schornack S, Kamoun S, Holub EB, Halkier BA, Jones JD.

BMC Biol. 2017 Mar 20;15(1):20. doi: 10.1186/s12915-017-0360-z.

8.

R-gene variation across Arabidopsis lyrata subspecies: effects of population structure, selection and mating system.

Buckley J, Kilbride E, Cevik V, Vicente JG, Holub EB, Mable BK.

BMC Evol Biol. 2016 May 5;16:93. doi: 10.1186/s12862-016-0665-5.

9.

Autoimmunity conferred by chs3-2D relies on CSA1, its adjacent TNL-encoding neighbour.

Xu F, Zhu C, Cevik V, Johnson K, Liu Y, Sohn K, Jones JD, Holub EB, Li X.

Sci Rep. 2015 Mar 5;5:8792. doi: 10.1038/srep08792.

10.

Parallel Loss-of-Function at the RPM1 Bacterial Resistance Locus in Arabidopsis thaliana.

Rose L, Atwell S, Grant M, Holub EB.

Front Plant Sci. 2012 Dec 26;3:287. doi: 10.3389/fpls.2012.00287. eCollection 2012.

11.

Xanthomonas campestris pv. campestris (cause of black rot of crucifers) in the genomic era is still a worldwide threat to brassica crops.

Vicente JG, Holub EB.

Mol Plant Pathol. 2013 Jan;14(1):2-18. doi: 10.1111/j.1364-3703.2012.00833.x. Epub 2012 Oct 11.

PMID:
23051837
12.

MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis.

Çevik V, Kidd BN, Zhang P, Hill C, Kiddle S, Denby KJ, Holub EB, Cahill DM, Manners JM, Schenk PM, Beynon J, Kazan K.

Plant Physiol. 2012 Sep;160(1):541-55. doi: 10.1104/pp.112.202697. Epub 2012 Jul 22.

13.

The molecular basis of host specialization in bean pathovars of Pseudomonas syringae.

Baltrus DA, Nishimura MT, Dougherty KM, Biswas S, Mukhtar MS, Vicente J, Holub EB, Dangl JL.

Mol Plant Microbe Interact. 2012 Jul;25(7):877-88. doi: 10.1094/MPMI-08-11-0218.

14.

Molecular cloning of ATR5(Emoy2) from Hyaloperonospora arabidopsidis, an avirulence determinant that triggers RPP5-mediated defense in Arabidopsis.

Bailey K, Cevik V, Holton N, Byrne-Richardson J, Sohn KH, Coates M, Woods-Tör A, Aksoy HM, Hughes L, Baxter L, Jones JD, Beynon J, Holub EB, Tör M.

Mol Plant Microbe Interact. 2011 Jul;24(7):827-38. doi: 10.1094/MPMI-12-10-0278.

15.

The effect of mating system on growth of Arabidopsis lyrata in response to inoculation with the biotrophic parasite Albugo candida.

Hoebe PN, Stift M, Holub EB, Mable BK.

J Evol Biol. 2011 Feb;24(2):391-401. doi: 10.1111/j.1420-9101.2010.02177.x. Epub 2010 Nov 22.

16.

WRR4, a broad-spectrum TIR-NB-LRR gene from Arabidopsis thaliana that confers white rust resistance in transgenic oilseed Brassica crops.

Borhan MH, Holub EB, Kindrachuk C, Omidi M, Bozorgmanesh-Frad G, Rimmer SR.

Mol Plant Pathol. 2010 Mar;11(2):283-91. doi: 10.1111/j.1364-3703.2009.00599.x.

PMID:
20447277
17.

A new species of Albugo parasitic to Arabidopsis thaliana reveals new evolutionary patterns in white blister rusts (Albuginaceae).

Thines M, Choi YJ, Kemen E, Ploch S, Holub EB, Shin HD, Jones JD.

Persoonia. 2009 Jun;22:123-8. doi: 10.3767/003158509X457931. Epub 2009 May 26.

18.

The scale of population structure in Arabidopsis thaliana.

Platt A, Horton M, Huang YS, Li Y, Anastasio AE, Mulyati NW, Agren J, Bossdorf O, Byers D, Donohue K, Dunning M, Holub EB, Hudson A, Le Corre V, Loudet O, Roux F, Warthmann N, Weigel D, Rivero L, Scholl R, Nordborg M, Bergelson J, Borevitz JO.

PLoS Genet. 2010 Feb 12;6(2):e1000843. doi: 10.1371/journal.pgen.1000843.

19.

Maintenance of genetic variation in plants and pathogens involves complex networks of gene-for-gene interactions.

Hall SA, Allen RL, Baumber RE, Baxter LA, Fisher K, Bittner-Eddy PD, Rose LE, Holub EB, Beynon JL.

Mol Plant Pathol. 2009 Jul;10(4):449-57. doi: 10.1111/j.1364-3703.2009.00544.x.

PMID:
19523099
20.

WRR4 encodes a TIR-NB-LRR protein that confers broad-spectrum white rust resistance in Arabidopsis thaliana to four physiological races of Albugo candida.

Borhan MH, Gunn N, Cooper A, Gulden S, Tör M, Rimmer SR, Holub EB.

Mol Plant Microbe Interact. 2008 Jun;21(6):757-68. doi: 10.1094/MPMI-21-6-0757.

21.

Basic compatibility of Albugo candida in Arabidopsis thaliana and Brassica juncea causes broad-spectrum suppression of innate immunity.

Cooper AJ, Latunde-Dada AO, Woods-Tör A, Lynn J, Lucas JA, Crute IR, Holub EB.

Mol Plant Microbe Interact. 2008 Jun;21(6):745-56. doi: 10.1094/MPMI-21-6-0745.

22.

Natural variation in innate immunity of a pioneer species.

Holub EB.

Curr Opin Plant Biol. 2007 Aug;10(4):415-24. Epub 2007 Jul 12. Review.

PMID:
17631039
23.

Evolution of parasitic symbioses between plants and filamentous microorganisms.

Holub EB.

Curr Opin Plant Biol. 2006 Aug;9(4):397-405. Epub 2006 May 22. Review.

PMID:
16714140
24.

An Arabidopsis NPR1-like gene, NPR4, is required for disease resistance.

Liu G, Holub EB, Alonso JM, Ecker JR, Fobert PR.

Plant J. 2005 Jan;41(2):304-18.

25.

The arabidopsis TIR-NB-LRR gene RAC1 confers resistance to Albugo candida (white rust) and is dependent on EDS1 but not PAD4.

Borhan MH, Holub EB, Beynon JL, Rozwadowski K, Rimmer SR.

Mol Plant Microbe Interact. 2004 Jul;17(7):711-9.

26.

Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance.

Eulgem T, Weigman VJ, Chang HS, McDowell JM, Holub EB, Glazebrook J, Zhu T, Dangl JL.

Plant Physiol. 2004 Jun;135(2):1129-44. Epub 2004 Jun 4.

27.
28.

Matrix, reinvention in plants: how genetics is unveiling secrets of non-host disease resistance.

Holub EB, Cooper A.

Trends Plant Sci. 2004 May;9(5):211-4. Review. No abstract available.

PMID:
15130544
29.

The maintenance of extreme amino acid diversity at the disease resistance gene, RPP13, in Arabidopsis thaliana.

Rose LE, Bittner-Eddy PD, Langley CH, Holub EB, Michelmore RW, Beynon JL.

Genetics. 2004 Mar;166(3):1517-27.

30.

Arabidopsis SGT1b is required for defense signaling conferred by several downy mildew resistance genes.

Tör M, Gordon P, Cuzick A, Eulgem T, Sinapidou E, Mert-Türk F, Can C, Dangl JL, Holub EB.

Plant Cell. 2002 May;14(5):993-1003.

31.

The arms race is ancient history in Arabidopsis, the wildflower.

Holub EB.

Nat Rev Genet. 2001 Jul;2(7):516-27. Review.

PMID:
11433358
32.
34.
36.

Genetic and physical mapping of the RPP13 locus, in Arabidopsis, responsible for specific recognition of several Peronospora parasitica (downy mildew) isolates.

Bittner-Eddy P, Can C, Gunn N, Pinel M, Tör M, Crute I, Holub EB, Beynon J.

Mol Plant Microbe Interact. 1999 Sep;12(9):792-802.

37.

Intragenic recombination and diversifying selection contribute to the evolution of downy mildew resistance at the RPP8 locus of Arabidopsis.

McDowell JM, Dhandaydham M, Long TA, Aarts MG, Goff S, Holub EB, Dangl JL.

Plant Cell. 1998 Nov;10(11):1861-74.

38.

Three genes of the Arabidopsis RPP1 complex resistance locus recognize distinct Peronospora parasitica avirulence determinants.

Botella MA, Parker JE, Frost LN, Bittner-Eddy PD, Beynon JL, Daniels MJ, Holub EB, Jones JD.

Plant Cell. 1998 Nov;10(11):1847-60.

39.

Disease resistance gene homologs correlate with disease resistance loci of Arabidopsis thaliana.

Speulman E, Bouchez D, Holub EB, Beynon JL.

Plant J. 1998 May;14(4):467-74.

40.

Identification of R-gene homologous DNA fragments genetically linked to disease resistance loci in Arabidopsis thaliana.

Aarts MG, te Lintel Hekkert B, Holub EB, Beynon JL, Stiekema WJ, Pereira A.

Mol Plant Microbe Interact. 1998 Apr;11(4):251-8.

41.

Phytoalexin-deficient mutants of Arabidopsis reveal that PAD4 encodes a regulatory factor and that four PAD genes contribute to downy mildew resistance.

Glazebrook J, Zook M, Mert F, Kagan I, Rogers EE, Crute IR, Holub EB, Hammerschmidt R, Ausubel FM.

Genetics. 1997 May;146(1):381-92.

42.
43.

Phenotypic and genotypic variation in the interaction between Arabidopsis thaliana and Albugo candida.

Holub EB, Brose E, Tör M, Clay C, Crute IR, Beynon JL.

Mol Plant Microbe Interact. 1995 Nov-Dec;8(6):916-28.

PMID:
8664502
44.

NDR1, a locus of Arabidopsis thaliana that is required for disease resistance to both a bacterial and a fungal pathogen.

Century KS, Holub EB, Staskawicz BJ.

Proc Natl Acad Sci U S A. 1995 Jul 3;92(14):6597-601.

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