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Items: 25

1.

Characterization of genes and alleles involved in the control of flowering time in grapevine.

Kamal N, Ochßner I, Schwandner A, Viehöver P, Hausmann L, Töpfer R, Weisshaar B, Holtgräwe D.

PLoS One. 2019 Jul 3;14(7):e0214703. doi: 10.1371/journal.pone.0214703. eCollection 2019.

2.

A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set.

Pucker B, Holtgräwe D, Stadermann KB, Frey K, Huettel B, Reinhardt R, Weisshaar B.

PLoS One. 2019 May 21;14(5):e0216233. doi: 10.1371/journal.pone.0216233. eCollection 2019.

3.

Consideration of non-canonical splice sites improves gene prediction on the Arabidopsis thaliana Niederzenz-1 genome sequence.

Pucker B, Holtgräwe D, Weisshaar B.

BMC Res Notes. 2017 Dec 4;10(1):667. doi: 10.1186/s13104-017-2985-y.

4.

Crop wild relative populations of Beta vulgaris allow direct mapping of agronomically important genes.

Capistrano-Gossmann GG, Ries D, Holtgräwe D, Minoche A, Kraft T, Frerichmann SLM, Rosleff Soerensen T, Dohm JC, González I, Schilhabel M, Varrelmann M, Tschoep H, Uphoff H, Schütze K, Borchardt D, Toerjek O, Mechelke W, Lein JC, Schechert AW, Frese L, Himmelbauer H, Weisshaar B, Kopisch-Obuch FJ.

Nat Commun. 2017 Jun 6;8:15708. doi: 10.1038/ncomms15708.

5.

A De Novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny.

Pucker B, Holtgräwe D, Rosleff Sörensen T, Stracke R, Viehöver P, Weisshaar B.

PLoS One. 2016 Oct 6;11(10):e0164321. doi: 10.1371/journal.pone.0164321. eCollection 2016.

6.

Chloroplast Genome Sequence of Arabidopsis thaliana Accession Landsberg erecta, Assembled from Single-Molecule, Real-Time Sequencing Data.

Stadermann KB, Holtgräwe D, Weisshaar B.

Genome Announc. 2016 Sep 22;4(5). pii: e00975-16. doi: 10.1128/genomeA.00975-16.

7.

Rapid gene identification in sugar beet using deep sequencing of DNA from phenotypic pools selected from breeding panels.

Ries D, Holtgräwe D, Viehöver P, Weisshaar B.

BMC Genomics. 2016 Mar 15;17:236. doi: 10.1186/s12864-016-2566-9.

8.

SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome.

Stadermann KB, Weisshaar B, Holtgräwe D.

BMC Bioinformatics. 2015 Sep 16;16:295. doi: 10.1186/s12859-015-0726-6.

9.

Exploiting single-molecule transcript sequencing for eukaryotic gene prediction.

Minoche AE, Dohm JC, Schneider J, Holtgräwe D, Viehöver P, Montfort M, Sörensen TR, Weisshaar B, Himmelbauer H.

Genome Biol. 2015 Sep 2;16:184. doi: 10.1186/s13059-015-0729-7.

10.

Reliable in silico identification of sequence polymorphisms and their application for extending the genetic map of sugar beet (Beta vulgaris).

Holtgräwe D, Sörensen TR, Viehöver P, Schneider J, Schulz B, Borchardt D, Kraft T, Himmelbauer H, Weisshaar B.

PLoS One. 2014 Oct 10;9(10):e110113. doi: 10.1371/journal.pone.0110113. eCollection 2014.

11.

Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet (Beta vulgaris).

Stracke R, Holtgräwe D, Schneider J, Pucker B, Sörensen TR, Weisshaar B.

BMC Plant Biol. 2014 Sep 25;14:249. doi: 10.1186/s12870-014-0249-8.

12.

QTL analysis of flowering time and ripening traits suggests an impact of a genomic region on linkage group 1 in Vitis.

Fechter I, Hausmann L, Zyprian E, Daum M, Holtgräwe D, Weisshaar B, Töpfer R.

Theor Appl Genet. 2014 Sep;127(9):1857-72. doi: 10.1007/s00122-014-2310-2. Epub 2014 Aug 12.

13.

The B2 flowering time locus of beet encodes a zinc finger transcription factor.

Dally N, Xiao K, Holtgräwe D, Jung C.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10365-70. doi: 10.1073/pnas.1404829111. Epub 2014 Jun 25.

14.

Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades.

Heitkam T, Holtgräwe D, Dohm JC, Minoche AE, Himmelbauer H, Weisshaar B, Schmidt T.

Plant J. 2014 Aug;79(3):385-97. doi: 10.1111/tpj.12565. Epub 2014 Jul 2.

15.

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris).

Dohm JC, Minoche AE, Holtgräwe D, Capella-Gutiérrez S, Zakrzewski F, Tafer H, Rupp O, Sörensen TR, Stracke R, Reinhardt R, Goesmann A, Kraft T, Schulz B, Stadler PF, Schmidt T, Gabaldón T, Lehrach H, Weisshaar B, Himmelbauer H.

Nature. 2014 Jan 23;505(7484):546-9. doi: 10.1038/nature12817. Epub 2013 Dec 18.

PMID:
24352233
16.

Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration.

Weber B, Heitkam T, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T.

Mob DNA. 2013 Mar 1;4(1):8. doi: 10.1186/1759-8753-4-8.

17.

Evolutionary reshuffling in the Errantivirus lineage Elbe within the Beta vulgaris genome.

Wollrab C, Heitkam T, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T.

Plant J. 2012 Nov;72(4):636-51. doi: 10.1111/j.1365-313X.2012.05107.x. Epub 2012 Sep 24.

18.

Survey of sugar beet (Beta vulgaris L.) hAT transposons and MITE-like hATpin derivatives.

Menzel G, Krebs C, Diez M, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T.

Plant Mol Biol. 2012 Mar;78(4-5):393-405. doi: 10.1007/s11103-011-9872-z. Epub 2012 Jan 13.

PMID:
22246381
19.

Palaeohexaploid ancestry for Caryophyllales inferred from extensive gene-based physical and genetic mapping of the sugar beet genome (Beta vulgaris).

Dohm JC, Lange C, Holtgräwe D, Sörensen TR, Borchardt D, Schulz B, Lehrach H, Weisshaar B, Himmelbauer H.

Plant J. 2012 May;70(3):528-40. doi: 10.1111/j.1365-313X.2011.04898.x. Epub 2012 Feb 14. Erratum in: Plant J. 2012 Jul;71(1):182.

20.

High-throughput identification of genetic markers using representational oligonucleotide microarray analysis.

Lange C, Mittermayr L, Dohm JC, Holtgräwe D, Weisshaar B, Himmelbauer H.

Theor Appl Genet. 2010 Aug;121(3):549-65. doi: 10.1007/s00122-010-1329-2. Epub 2010 Apr 9.

PMID:
20379697
21.

Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris.

Zakrzewski F, Wenke T, Holtgräwe D, Weisshaar B, Schmidt T.

BMC Plant Biol. 2010 Jan 11;10:8. doi: 10.1186/1471-2229-10-8.

22.

An abundant and heavily truncated non-LTR retrotransposon (LINE) family in Beta vulgaris.

Wenke T, Holtgräwe D, Horn AV, Weisshaar B, Schmidt T.

Plant Mol Biol. 2009 Dec;71(6):585-97. doi: 10.1007/s11103-009-9542-6.

PMID:
19697140
23.

Construction and characterization of a sugar beet (Beta vulgaris) fosmid library.

Lange C, Holtgräwe D, Schulz B, Weisshaar B, Himmelbauer H.

Genome. 2008 Nov;51(11):948-51. doi: 10.1139/G08-071.

PMID:
18956027
24.

Diversity of a complex centromeric satellite and molecular characterization of dispersed sequence families in sugar beet (Beta vulgaris).

Menzel G, Dechyeva D, Wenke T, Holtgräwe D, Weisshaar B, Schmidt T.

Ann Bot. 2008 Oct;102(4):521-30. doi: 10.1093/aob/mcn131. Epub 2008 Aug 5.

25.

Doppelmarkierungen zur Bestimmung der absoluten Insektizid- und Flüssigkeitsaufnahme einer Blattlaus.

Holtgräwe D, Kloft W.

Oecologia. 1974 Sep;14(3):229-236. doi: 10.1007/BF01039794. German.

PMID:
28308621

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