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Items: 1 to 50 of 117

1.

Transition path times of coupled folding and binding reveal the formation of an encounter complex.

Sturzenegger F, Zosel F, Holmstrom ED, Buholzer KJ, Makarov DE, Nettels D, Schuler B.

Nat Commun. 2018 Nov 9;9(1):4708. doi: 10.1038/s41467-018-07043-x.

PMID:
30413694
2.

Cervical and Amniotic Fluid Matrix Metalloproteinase-8 and Interleukin-6 Concentrations in Preterm Pregnancies with or without Preterm Premature Rupture of Membranes.

Holmström E, Myntti T, Sorsa T, Kruit H, Juhila J, Paavonen J, Rahkonen L, Stefanovic V.

Fetal Diagn Ther. 2018 Oct 11:1-8. doi: 10.1159/000493207. [Epub ahead of print]

PMID:
30308501
3.

Dispersion Correction Alleviates Dye Stacking of Single-Stranded DNA and RNA in Simulations of Single-Molecule Fluorescence Experiments.

Grotz KK, Nueesch MF, Holmstrom ED, Heinz M, Stelzl LS, Schuler B, Hummer G.

J Phys Chem B. 2018 Oct 17. doi: 10.1021/acs.jpcb.8b07537. [Epub ahead of print]

PMID:
30285443
4.

Postoperative management in cataract surgery: nepafenac and preservative-free diclofenac compared.

Ylinen P, Taipale C, Lindholm JM, Laine I, Holmström E, Tuuminen R.

Acta Ophthalmol. 2018 Oct 3. doi: 10.1111/aos.13843. [Epub ahead of print]

PMID:
30284393
5.

Macular edema after cataract surgery in eyes with and without pseudoexfoliation syndrome.

Ilveskoski L, Taipale C, Holmström EJ, Tuuminen R.

Eur J Ophthalmol. 2018 Sep 12:1120672118799622. doi: 10.1177/1120672118799622. [Epub ahead of print]

PMID:
30205708
6.

Systemic use of calcium channel blockers associated with less increase in central retinal thickness after uncomplicated cataract surgery.

Danni R, Taipale C, Holmström EJ, Ilveskoski L, Tuuminen R.

Acta Ophthalmol. 2018 Sep 5. doi: 10.1111/aos.13911. [Epub ahead of print]

PMID:
30187630
7.

Phase-transition assisted mechanical behavior of TiZrHfTax high-entropy alloys.

Huang S, Li W, Holmström E, Vitos L.

Sci Rep. 2018 Aug 22;8(1):12576. doi: 10.1038/s41598-018-30892-x.

8.

Tests of Kramers' Theory at the Single-Molecule Level: Evidence for Folding of an Isolated RNA Tertiary Interaction at the Viscous Speed Limit.

Dupuis NF, Holmstrom ED, Nesbitt DJ.

J Phys Chem B. 2018 Sep 27;122(38):8796-8804. doi: 10.1021/acs.jpcb.8b04014. Epub 2018 Sep 18.

PMID:
30078323
9.

Twinning in metastable high-entropy alloys.

Huang S, Huang H, Li W, Kim D, Lu S, Li X, Holmström E, Kwon SK, Vitos L.

Nat Commun. 2018 Jun 18;9(1):2381. doi: 10.1038/s41467-018-04780-x.

10.

Preoperative visual acuity does not correlate with patient satisfaction for cataract surgery.

Taipale C, Holmström EJ, Tuuminen R.

Acta Ophthalmol. 2018 Apr 20. doi: 10.1111/aos.13792. [Epub ahead of print] No abstract available.

PMID:
29679456
11.

Incorporation of isotopic, fluorescent, and heavy-atom-modified nucleotides into RNAs by position-selective labeling of RNA.

Liu Y, Holmstrom E, Yu P, Tan K, Zuo X, Nesbitt DJ, Sousa R, Stagno JR, Wang YX.

Nat Protoc. 2018 May;13(5):987-1005. doi: 10.1038/nprot.2018.002. Epub 2018 Apr 12.

PMID:
29651055
12.

Directional Sensitivity in Light-Mass Dark Matter Searches with Single-Electron-Resolution Ionization Detectors.

Kadribasic F, Mirabolfathi N, Nordlund K, Sand AE, Holmström E, Djurabekova F.

Phys Rev Lett. 2018 Mar 16;120(11):111301. doi: 10.1103/PhysRevLett.120.111301.

PMID:
29601776
13.

Anti-inflammatory medication following cataract surgery: a randomized trial between preservative-free dexamethasone, diclofenac and their combination.

Ylinen P, Holmström E, Laine I, Lindholm JM, Tuuminen R.

Acta Ophthalmol. 2018 Aug;96(5):486-493. doi: 10.1111/aos.13670. Epub 2018 Jan 25.

PMID:
29369527
14.

Electroconvulsive therapy for manic state with mixed and psychotic features in a teenager with bipolar disorder and comorbid episodic obsessive-compulsive disorder: a case report.

Rask O, Suneson K, Holmström E, Bäckström B, Johansson BA.

J Med Case Rep. 2017 Dec 12;11(1):345. doi: 10.1186/s13256-017-1508-8.

15.

Adsorption of Water onto SrTiO3 from Periodic Møller-Plesset Second-Order Perturbation Theory.

Holmström E, Foster AS.

J Chem Theory Comput. 2017 Dec 12;13(12):6301-6307. doi: 10.1021/acs.jctc.7b00549. Epub 2017 Nov 13.

PMID:
29111712
16.

Conformational Plasticity of Hepatitis C Virus Core Protein Enables RNA-Induced Formation of Nucleocapsid-like Particles.

Holmstrom ED, Nettels D, Schuler B.

J Mol Biol. 2018 Aug 3;430(16):2453-2467. doi: 10.1016/j.jmb.2017.10.010. Epub 2017 Oct 16.

17.

First Principles Theory of the hcp-fcc Phase Transition in Cobalt.

Lizárraga R, Pan F, Bergqvist L, Holmström E, Gercsi Z, Vitos L.

Sci Rep. 2017 Jun 19;7(1):3778. doi: 10.1038/s41598-017-03877-5.

18.

The interface of SrTiO3 and H2O from density functional theory molecular dynamics.

Holmström E, Spijker P, Foster AS.

Proc Math Phys Eng Sci. 2016 Sep;472(2193):20160293.

19.

Simvastatin Treatment Upregulates Anti-Fibrotic Bone Morphogenetic Protein-7 Expression at Rat Cardiac Allograft Rejection.

Holmström EJ, Lemström KB, Tuuminen R.

Pharmacology. 2016;98(5-6):204-208. Epub 2016 Jul 1.

PMID:
27359361
20.

Computer Enabled Neuroplasticity Treatment: A Clinical Trial of a Novel Design for Neurofeedback Therapy in Adult ADHD.

Cowley B, Holmström É, Juurmaa K, Kovarskis L, Krause CM.

Front Hum Neurosci. 2016 May 9;10:205. doi: 10.3389/fnhum.2016.00205. eCollection 2016.

21.

Biophysical Insights from Temperature-Dependent Single-Molecule Förster Resonance Energy Transfer.

Holmstrom ED, Nesbitt DJ.

Annu Rev Phys Chem. 2016 May 27;67:441-65. doi: 10.1146/annurev-physchem-040215-112544. Review.

PMID:
27215819
22.

Simvastatin pretreatment reduces caspase-9 and RIPK1 protein activity in rat cardiac allograft ischemia-reperfusion.

Tuuminen R, Holmström E, Raissadati A, Saharinen P, Rouvinen E, Krebs R, Lemström KB.

Transpl Immunol. 2016 Jul;37:40-45. doi: 10.1016/j.trim.2016.05.001. Epub 2016 May 4.

PMID:
27155462
23.

Mechanistic Insights into Cofactor-Dependent Coupling of RNA Folding and mRNA Transcription/Translation by a Cobalamin Riboswitch.

Polaski JT, Holmstrom ED, Nesbitt DJ, Batey RT.

Cell Rep. 2016 May 3;15(5):1100-1110. doi: 10.1016/j.celrep.2016.03.087. Epub 2016 Apr 21.

24.

Effect of endocannabinoid degradation on pain: role of FAAH polymorphisms in experimental and postoperative pain in women treated for breast cancer.

Cajanus K, Holmström EJ, Wessman M, Anttila V, Kaunisto MA, Kalso E.

Pain. 2016 Feb;157(2):361-9. doi: 10.1097/j.pain.0000000000000398.

PMID:
26808012
25.

Replacing monocultures with mixed-species stands: Ecosystem service implications of two production forest alternatives in Sweden.

Felton A, Nilsson U, Sonesson J, Felton AM, Roberge JM, Ranius T, Ahlström M, Bergh J, Björkman C, Boberg J, Drössler L, Fahlvik N, Gong P, Holmström E, Keskitalo EC, Klapwijk MJ, Laudon H, Lundmark T, Niklasson M, Nordin A, Pettersson M, Stenlid J, Sténs A, Wallertz K.

Ambio. 2016 Feb;45 Suppl 2:124-39. doi: 10.1007/s13280-015-0749-2.

26.

Single-Molecule FRET Reveals Three Conformations for the TLS Domain of Brome Mosaic Virus Genome.

Vieweger M, Holmstrom ED, Nesbitt DJ.

Biophys J. 2015 Dec 15;109(12):2625-2636. doi: 10.1016/j.bpj.2015.10.006.

27.

Synthesis and applications of RNAs with position-selective labelling and mosaic composition.

Liu Y, Holmstrom E, Zhang J, Yu P, Wang J, Dyba MA, Chen D, Ying J, Lockett S, Nesbitt DJ, Ferré-D'Amaré AR, Sousa R, Stagno JR, Wang YX.

Nature. 2015 Jun 18;522(7556):368-72. doi: 10.1038/nature14352. Epub 2015 May 4.

28.

Spin crossover in ferropericlase from first-principles molecular dynamics.

Holmström E, Stixrude L.

Phys Rev Lett. 2015 Mar 20;114(11):117202. Epub 2015 Mar 19.

PMID:
25839305
29.

Kinetic and thermodynamic origins of osmolyte-influenced nucleic acid folding.

Holmstrom ED, Dupuis NF, Nesbitt DJ.

J Phys Chem B. 2015 Mar 5;119(9):3687-96. doi: 10.1021/jp512491n. Epub 2015 Feb 18.

PMID:
25621404
30.

Single-molecule conformational dynamics of a biologically functional hydroxocobalamin riboswitch.

Holmstrom ED, Polaski JT, Batey RT, Nesbitt DJ.

J Am Chem Soc. 2014 Dec 3;136(48):16832-43. doi: 10.1021/ja5076184. Epub 2014 Nov 19.

31.

Molecular-crowding effects on single-molecule RNA folding/unfolding thermodynamics and kinetics.

Dupuis NF, Holmstrom ED, Nesbitt DJ.

Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8464-9. doi: 10.1073/pnas.1316039111. Epub 2014 May 21.

32.

Disorder-induced room temperature ferromagnetism in glassy chromites.

Araujo CM, Nagar S, Ramzan M, Shukla R, Jayakumar OD, Tyagi AK, Liu YS, Chen JL, Glans PA, Chang C, Blomqvist A, Lizárraga R, Holmström E, Belova L, Guo J, Ahuja R, Rao KV.

Sci Rep. 2014 Apr 15;4:4686. doi: 10.1038/srep04686.

33.

Single-molecule fluorescence resonance energy transfer studies of the human telomerase RNA pseudoknot: temperature-/urea-dependent folding kinetics and thermodynamics.

Holmstrom ED, Nesbitt DJ.

J Phys Chem B. 2014 Apr 10;118(14):3853-63. doi: 10.1021/jp501893c. Epub 2014 Mar 28. Erratum in: J Phys Chem B. 2014 Jun 5;118(22):6048.

34.

Pulsed IR heating studies of single-molecule DNA duplex dissociation kinetics and thermodynamics.

Holmstrom ED, Dupuis NF, Nesbitt DJ.

Biophys J. 2014 Jan 7;106(1):220-31. doi: 10.1016/j.bpj.2013.11.008.

35.
36.

Single-molecule kinetics reveal cation-promoted DNA duplex formation through ordering of single-stranded helices.

Dupuis NF, Holmstrom ED, Nesbitt DJ.

Biophys J. 2013 Aug 6;105(3):756-66. doi: 10.1016/j.bpj.2013.05.061.

37.

A new parametrization of the Stillinger-Weber potential for an improved description of defects and plasticity of silicon.

Pizzagalli L, Godet J, Guénolé J, Brochard S, Holmstrom E, Nordlund K, Albaret T.

J Phys Condens Matter. 2013 Feb 6;25(5):055801. doi: 10.1088/0953-8984/25/5/055801. Epub 2013 Jan 8.

PMID:
23300192
38.

Vaccination against encapsulated bacteria in hereditary C2 deficiency results in antibody response and opsonization due to antibody-dependent complement activation.

Jönsson G, Lood C, Gullstrand B, Holmström E, Selander B, Braconier JH, Sturfelt G, Bengtsson AA, Truedsson L.

Clin Immunol. 2012 Sep;144(3):214-27. doi: 10.1016/j.clim.2012.06.008. Epub 2012 Jul 6.

PMID:
22842196
39.

The role of counterion valence and size in GAAA tetraloop-receptor docking/undocking kinetics.

Fiore JL, Holmstrom ED, Fiegland LR, Hodak JH, Nesbitt DJ.

J Mol Biol. 2012 Oct 19;423(2):198-216. doi: 10.1016/j.jmb.2012.07.006. Epub 2012 Jul 14.

PMID:
22796627
40.

Health factors in the everyday life and work of public sector employees in Sweden.

Erlandsson LK, Carlsson G, Horstmann V, Gard G, Holmström E.

Work. 2012;42(3):321-30. doi: 10.3233/WOR-2012-1427.

PMID:
22523024
41.

Thermodynamic origins of monovalent facilitated RNA folding.

Holmstrom ED, Fiore JL, Nesbitt DJ.

Biochemistry. 2012 May 8;51(18):3732-43. doi: 10.1021/bi201420a. Epub 2012 Apr 23.

42.

Entropic origin of Mg2+-facilitated RNA folding.

Fiore JL, Holmstrom ED, Nesbitt DJ.

Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2902-7. doi: 10.1073/pnas.1114859109. Epub 2012 Feb 1.

43.

Efficient spin injection through exchange coupling at organic semiconductor/ferromagnet heterojunctions.

Zhan Y, Holmström E, Lizárraga R, Eriksson O, Liu X, Li F, Carlegrim E, Stafström S, Fahlman M.

Adv Mater. 2010 Apr 12;22(14):1626-30. doi: 10.1002/adma.200903556. No abstract available.

PMID:
20496393
44.

ADHD symptoms and maturity - a follow-up study in school children.

Gustafsson P, Holmström E, Besjakov J, Karlsson MK.

Acta Paediatr. 2010 Oct;99(10):1536-9. doi: 10.1111/j.1651-2227.2010.01851.x.

PMID:
20456272
45.

Ab initio method for locating characteristic potential-energy minima of liquids.

Holmström E, Bock N, Peery TB, Lizárraga R, De Lorenzi-Venneri G, Chisolm ED, Wallace DC.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Nov;80(5 Pt 1):051111. Epub 2009 Nov 12.

PMID:
20364951
46.

Influence of prolonged unilateral cervical muscle contraction on head repositioning--decreased overshoot after a 5-min static muscle contraction task.

Malmström EM, Karlberg M, Holmström E, Fransson PA, Hansson GA, Magnusson M.

Man Ther. 2010 Jun;15(3):229-34. doi: 10.1016/j.math.2009.12.003. Epub 2010 Jan 18.

PMID:
20083423
48.

Human complement activation by smooth and rough Proteus mirabilis lipopolysaccharides.

Kaca W, Arabski M, Fudała R, Holmström E, Sjöholm A, Weintraub A, Futoma-Kołoch B, Bugla-Płoskońska G, Doroszkiewicz W.

Arch Immunol Ther Exp (Warsz). 2009 Sep-Oct;57(5):383-91. doi: 10.1007/s00005-009-0043-8. Epub 2009 Aug 18.

PMID:
19707721
49.

Extended Lagrangian Born-Oppenheimer molecular dynamics with dissipation.

Niklasson AM, Steneteg P, Odell A, Bock N, Challacombe M, Tymczak CJ, Holmström E, Zheng G, Weber V.

J Chem Phys. 2009 Jun 7;130(21):214109. doi: 10.1063/1.3148075.

50.

A correlation found between contact allergy to stent material and restenosis of the coronary arteries.

Svedman C, Ekqvist S, Möller H, Björk J, Pripp CM, Gruvberger B, Holmström E, Gustavsson CG, Bruze M.

Contact Dermatitis. 2009 Mar;60(3):158-64. doi: 10.1111/j.1600-0536.2008.01502.x.

PMID:
19260914

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