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Items: 48

1.

Evaluation of thioesterases from Acinetobacter baylyi for production of free fatty acids.

Ukey R, Holmes WE, Bajpai R, Chistoserdov AY.

Can J Microbiol. 2017 Apr;63(4):321-329. doi: 10.1139/cjm-2016-0458. Epub 2017 Mar 23.

PMID:
28335611
2.

Circulating protein synthesis rates reveal skeletal muscle proteome dynamics.

Shankaran M, King CL, Angel TE, Holmes WE, Li KW, Colangelo M, Price JC, Turner SM, Bell C, Hamilton KL, Miller BF, Hellerstein MK.

J Clin Invest. 2016 Jan;126(1):288-302. doi: 10.1172/JCI79639. Epub 2015 Dec 14.

3.

Reduced in vivo hepatic proteome replacement rates but not cell proliferation rates predict maximum lifespan extension in mice.

Thompson AC, Bruss MD, Price JC, Khambatta CF, Holmes WE, Colangelo M, Dalidd M, Roberts LS, Astle CM, Harrison DE, Hellerstein MK.

Aging Cell. 2016 Feb;15(1):118-27. doi: 10.1111/acel.12414. Epub 2015 Nov 6.

4.

Dynamic Proteomics: In Vivo Proteome-Wide Measurement of Protein Kinetics Using Metabolic Labeling.

Holmes WE, Angel TE, Li KW, Hellerstein MK.

Methods Enzymol. 2015;561:219-76. doi: 10.1016/bs.mie.2015.05.018. Epub 2015 Jul 17. Review.

PMID:
26358907
5.

Turnover rates of hepatic collagen and circulating collagen-associated proteins in humans with chronic liver disease.

Decaris ML, Emson CL, Li K, Gatmaitan M, Luo F, Cattin J, Nakamura C, Holmes WE, Angel TE, Peters MG, Turner SM, Hellerstein MK.

PLoS One. 2015 Apr 24;10(4):e0123311. doi: 10.1371/journal.pone.0123311. eCollection 2015.

6.

Proteomic analysis of altered extracellular matrix turnover in bleomycin-induced pulmonary fibrosis.

Decaris ML, Gatmaitan M, FlorCruz S, Luo F, Li K, Holmes WE, Hellerstein MK, Turner SM, Emson CL.

Mol Cell Proteomics. 2014 Jul;13(7):1741-52. doi: 10.1074/mcp.M113.037267. Epub 2014 Apr 16.

7.

Greater muscle protein synthesis and mitochondrial biogenesis in males compared with females during sprint interval training.

Scalzo RL, Peltonen GL, Binns SE, Shankaran M, Giordano GR, Hartley DA, Klochak AL, Lonac MC, Paris HL, Szallar SE, Wood LM, Peelor FF 3rd, Holmes WE, Hellerstein MK, Bell C, Hamilton KL, Miller BF.

FASEB J. 2014 Jun;28(6):2705-14. doi: 10.1096/fj.13-246595. Epub 2014 Mar 5.

PMID:
24599968
8.

Lipid-enhancement of activated sludges obtained from conventional activated sludge and oxidation ditch processes.

Revellame ED, Hernandez R, French WT, Holmes WE, Forks A, Callahan R 2nd.

Bioresour Technol. 2013 Nov;148:487-93. doi: 10.1016/j.biortech.2013.08.158. Epub 2013 Sep 5.

PMID:
24077159
9.

Effect of different C/N ratios on carotenoid and lipid production by Rhodotorula glutinis.

Braunwald T, Schwemmlein L, Graeff-Hönninger S, French WT, Hernandez R, Holmes WE, Claupein W.

Appl Microbiol Biotechnol. 2013 Jul;97(14):6581-8. doi: 10.1007/s00253-013-5005-8. Epub 2013 Jun 1.

PMID:
23728238
10.

Biodegradation of clomazone in a California rice field soil: carbon allocation and community effects.

Tomco PL, Holmes WE, Tjeerdema RS.

J Agric Food Chem. 2013 Mar 20;61(11):2618-24. doi: 10.1021/jf304692c. Epub 2013 Mar 6.

PMID:
23432155
11.

The effect of long term calorie restriction on in vivo hepatic proteostatis: a novel combination of dynamic and quantitative proteomics.

Price JC, Khambatta CF, Li KW, Bruss MD, Shankaran M, Dalidd M, Floreani NA, Roberts LS, Turner SM, Holmes WE, Hellerstein MK.

Mol Cell Proteomics. 2012 Dec;11(12):1801-14. doi: 10.1074/mcp.M112.021204. Epub 2012 Sep 13.

12.

The pathology associated with visceral toxicosis of catfish.

Khoo LH, Goodwin AE, Wise DJ, Holmes WE, Hanson LA, Steadman JM, McIntyre LM, Gaunt PS.

J Vet Diagn Invest. 2011 Nov;23(6):1217-21. doi: 10.1177/1040638711425577.

PMID:
22362805
13.
14.

Measurement of human plasma proteome dynamics with (2)H(2)O and liquid chromatography tandem mass spectrometry.

Price JC, Holmes WE, Li KW, Floreani NA, Neese RA, Turner SM, Hellerstein MK.

Anal Biochem. 2012 Jan 1;420(1):73-83. doi: 10.1016/j.ab.2011.09.007. Epub 2011 Sep 14.

PMID:
21964502
15.

Structure and functional expression of a human interleukin-8 receptor. Science. 1991. 253: 1278-1280.

Holmes WE, Lee J, Kuang WJ, Rice GC, Wood WI.

J Immunol. 2009 Sep 1;183(5):2895-7. No abstract available.

16.

Simulated atmospheric NO3- deposition increases soil organic matter by slowing decomposition.

Zak DR, Holmes WE, Burton AJ, Pregitzer KS, Talhelm AF.

Ecol Appl. 2008 Dec;18(8):2016-27. Erratum in: Ecol Appl. 2010 Jun;20(4):1190.

PMID:
19263894
17.

Modelled female sale options demonstrate improved profitability in northern beef herds.

Niethe GE, Holmes WE.

Aust Vet J. 2008 Dec;86(12):458-64. doi: 10.1111/j.1751-0813.2008.00366.x.

PMID:
19076767
18.

Atmospheric CO2 and O3 alter the flow of 15N in developing forest ecosystems.

Zak DR, Holmes WE, Pregitzer KS.

Ecology. 2007 Oct;88(10):2630-9.

19.

Development of a heterogeneous catalytic cracking reactor utilizing online mass spectrometry analysis.

Benson TJ, Holmes WE, White MG, French WT, Alley EG, Hernandez R.

J Chromatogr A. 2007 Nov 23;1172(2):204-8. Epub 2007 Oct 2.

PMID:
17959186
20.

Increases in nitrogen uptake rather than nitrogen-use efficiency support higher rates of temperate forest productivity under elevated CO2.

Finzi AC, Norby RJ, Calfapietra C, Gallet-Budynek A, Gielen B, Holmes WE, Hoosbeek MR, Iversen CM, Jackson RB, Kubiske ME, Ledford J, Liberloo M, Oren R, Polle A, Pritchard S, Zak DR, Schlesinger WH, Ceulemans R.

Proc Natl Acad Sci U S A. 2007 Aug 28;104(35):14014-9. Epub 2007 Aug 20.

21.

Identification of (-)-beta-caryophyllene as a gender-specific terpene produced by the multicolored Asian lady beetle.

Brown AE, Riddick EW, Aldrich JR, Holmes WE.

J Chem Ecol. 2006 Nov;32(11):2489-99.

PMID:
17019620
22.

Oral administration of sucrose solutions and measurement of serum sucrose concentrations to evaluate gastric permeability in adult bottlenose dolphins (Tursiops truncatus).

Buddington KK, Holmes WE, Clemons-Chevis CL, Solangi MA, Vanderpool D, Buddington RK.

Am J Vet Res. 2006 Jun;67(6):931-5.

PMID:
16740082
23.
24.

Influence of adjunct cultures on volatile free fatty acids in reduced-fat Edam cheeses.

Tungjaroenchai W, White CH, Holmes WE, Drake MA.

J Dairy Sci. 2004 Oct;87(10):3224-34.

25.

Determination of abamectin in soil samples using high-performance liquid chromatography with tandem mass spectrometry.

Brewer BN, Armbrust KL, Mead KT, Holmes WE.

Rapid Commun Mass Spectrom. 2004;18(15):1693-6.

PMID:
15282767
26.

Follistatin-related protein and follistatin differentially neutralize endogenous vs. exogenous activin.

Sidis Y, Tortoriello DV, Holmes WE, Pan Y, Keutmann HT, Schneyer AL.

Endocrinology. 2002 May;143(5):1613-24.

PMID:
11956142
27.

Microbial community composition and function beneath temperate trees exposed to elevated atmospheric carbon dioxide and ozone.

Phillips RL, Zak DR, Holmes WE, White DC.

Oecologia. 2002 Apr;131(2):236-244. doi: 10.1007/s00442-002-0868-x. Epub 2002 Apr 1.

28.

Novel genes regulated by the insulin sensitizer rosiglitazone during adipocyte differentiation.

Albrektsen T, Frederiksen KS, Holmes WE, Boel E, Taylor K, Fleckner J.

Diabetes. 2002 Apr;51(4):1042-51.

29.

Human follistatin-related protein: a structural homologue of follistatin with nuclear localization.

Tortoriello DV, Sidis Y, Holtzman DA, Holmes WE, Schneyer AL.

Endocrinology. 2001 Aug;142(8):3426-34.

PMID:
11459787
30.

Effect of repaglinide on cloned beta cell, cardiac and smooth muscle types of ATP-sensitive potassium channels.

Dabrowski M, Wahl P, Holmes WE, Ashcroft FM.

Diabetologia. 2001 Jun;44(6):747-56.

PMID:
11440368
31.

Twisted gastrulation can function as a BMP antagonist.

Chang C, Holtzman DA, Chau S, Chickering T, Woolf EA, Holmgren LM, Bodorova J, Gearing DP, Holmes WE, Brivanlou AH.

Nature. 2001 Mar 22;410(6827):483-7.

PMID:
11260717
32.

Peroxisome proliferator-activated receptor gamma target gene encoding a novel angiopoietin-related protein associated with adipose differentiation.

Yoon JC, Chickering TW, Rosen ED, Dussault B, Qin Y, Soukas A, Friedman JM, Holmes WE, Spiegelman BM.

Mol Cell Biol. 2000 Jul;20(14):5343-9.

33.

The stimulatory action of tolbutamide on Ca2+-dependent exocytosis in pancreatic beta cells is mediated by a 65-kDa mdr-like P-glycoprotein.

Barg S, Renström E, Berggren PO, Bertorello A, Bokvist K, Braun M, Eliasson L, Holmes WE, Köhler M, Rorsman P, Thévenod F.

Proc Natl Acad Sci U S A. 1999 May 11;96(10):5539-44.

34.

A truncated intracellular HER2/neu receptor produced by alternative RNA processing affects growth of human carcinoma cells.

Scott GK, Robles R, Park JW, Montgomery PA, Daniel J, Holmes WE, Lee J, Keller GA, Li WL, Fendly BM, et al.

Mol Cell Biol. 1993 Apr;13(4):2247-57.

35.

Identification of heregulin, a specific activator of p185erbB2.

Holmes WE, Sliwkowski MX, Akita RW, Henzel WJ, Lee J, Park JW, Yansura D, Abadi N, Raab H, Lewis GD, et al.

Science. 1992 May 22;256(5060):1205-10.

PMID:
1350381
36.

Structure and functional expression of a human interleukin-8 receptor.

Holmes WE, Lee J, Kuang WJ, Rice GC, Wood WI.

Science. 1991 Sep 13;253(5025):1278-80.

PMID:
1840701
37.

Selection for transformation and met protooncogene amplification in NIH 3T3 fibroblasts using tumor necrosis factor alpha.

Hudziak RM, Lewis GD, Holmes WE, Ullrich A, Shepard HM.

Cell Growth Differ. 1990 Mar;1(3):129-34.

39.

Enzymatic properties of single-chain and two-chain forms of a Lys158----Glu158 mutant of urokinase-type plasminogen activator.

Lijnen HR, Van Hoef B, Nelles L, Holmes WE, Collen D.

Eur J Biochem. 1988 Feb 15;172(1):185-8.

40.

Alpha 2-antiplasmin Enschede: alanine insertion and abolition of plasmin inhibitory activity.

Holmes WE, Lijnen HR, Nelles L, Kluft C, Nieuwenhuis HK, Rijken DC, Collen D.

Science. 1987 Oct 9;238(4824):209-11.

PMID:
2958938
41.
43.

Amino-acid sequence of human alpha 2-antiplasmin.

Lijnen HR, Holmes WE, van Hoef B, Wiman B, Rodriguez H, Collen D.

Eur J Biochem. 1987 Aug 3;166(3):565-74.

44.
45.

Primary structure of human alpha 2-antiplasmin, a serine protease inhibitor (serpin).

Holmes WE, Nelles L, Lijnen HR, Collen D.

J Biol Chem. 1987 Feb 5;262(4):1659-64.

46.

Functional role of proteolytic cleavage at arginine-275 of human tissue plasminogen activator as assessed by site-directed mutagenesis.

Tate KM, Higgins DL, Holmes WE, Winkler ME, Heyneker HL, Vehar GA.

Biochemistry. 1987 Jan 27;26(2):338-43.

PMID:
3103680
47.

Generation of antibody activity from immunoglobulin polypeptide chains produced in Escherichia coli.

Cabilly S, Riggs AD, Pande H, Shively JE, Holmes WE, Rey M, Perry LJ, Wetzel R, Heyneker HL.

Proc Natl Acad Sci U S A. 1984 Jun;81(11):3273-7.

48.

Cloning and expression of human tissue-type plasminogen activator cDNA in E. coli.

Pennica D, Holmes WE, Kohr WJ, Harkins RN, Vehar GA, Ward CA, Bennett WF, Yelverton E, Seeburg PH, Heyneker HL, Goeddel DV, Collen D.

Nature. 1983 Jan 20;301(5897):214-21. No abstract available.

PMID:
6337343

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