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Items: 29

1.

Transient and Permanent Reconfiguration of Chromatin and Transcription Factor Occupancy Drive Reprogramming.

Knaupp AS, Buckberry S, Pflueger J, Lim SM, Ford E, Larcombe MR, Rossello FJ, de Mendoza A, Alaei S, Firas J, Holmes ML, Nair SS, Clark SJ, Nefzger CM, Lister R, Polo JM.

Cell Stem Cell. 2017 Dec 7;21(6):834-845.e6. doi: 10.1016/j.stem.2017.11.007.

2.

An improved reprogrammable mouse model harbouring the reverse tetracycline-controlled transcriptional transactivator 3.

Alaei S, Knaupp AS, Lim SM, Chen J, Holmes ML, Änkö ML, Nefzger CM, Polo JM.

Stem Cell Res. 2016 Jul;17(1):49-53. doi: 10.1016/j.scr.2016.05.008. Epub 2016 May 25.

3.

A predictive computational framework for direct reprogramming between human cell types.

Rackham OJ, Firas J, Fang H, Oates ME, Holmes ML, Knaupp AS; FANTOM Consortium, Suzuki H, Nefzger CM, Daub CO, Shin JW, Petretto E, Forrest AR, Hayashizaki Y, Polo JM, Gough J.

Nat Genet. 2016 Mar;48(3):331-5. doi: 10.1038/ng.3487. Epub 2016 Jan 18.

PMID:
26780608
4.

Tai Chi training reduced coupling between respiration and postural control.

Holmes ML, Manor B, Hsieh WH, Hu K, Lipsitz LA, Li L.

Neurosci Lett. 2016 Jan 1;610:60-5. doi: 10.1016/j.neulet.2015.10.053. Epub 2015 Oct 28.

5.

BCL-2 is dispensable for thrombopoiesis and platelet survival.

Debrincat MA, Pleines I, Lebois M, Lane RM, Holmes ML, Corbin J, Vandenberg CJ, Alexander WS, Ng AP, Strasser A, Bouillet P, Sola-Visner M, Kile BT, Josefsson EC.

Cell Death Dis. 2015 Apr 16;6:e1721. doi: 10.1038/cddis.2015.97.

6.

Peripheral natural killer cell maturation depends on the transcription factor Aiolos.

Holmes ML, Huntington ND, Thong RP, Brady J, Hayakawa Y, Andoniou CE, Fleming P, Shi W, Smyth GK, Degli-Esposti MA, Belz GT, Kallies A, Carotta S, Smyth MJ, Nutt SL.

EMBO J. 2014 Nov 18;33(22):2721-34. doi: 10.15252/embj.201487900. Epub 2014 Oct 15.

7.

Cell surface marker mediated purification of iPS cell intermediates from a reprogrammable mouse model.

Nefzger CM, Alaei S, Knaupp AS, Holmes ML, Polo JM.

J Vis Exp. 2014 Sep 6;(91):e51728. doi: 10.3791/51728.

8.

Identification of Pax5 target genes in early B cell differentiation.

Pridans C, Holmes ML, Polli M, Wettenhall JM, Dakic A, Corcoran LM, Smyth GK, Nutt SL.

J Immunol. 2008 Feb 1;180(3):1719-28.

9.

The regulation of the B-cell gene expression programme by Pax5.

Holmes ML, Pridans C, Nutt SL.

Immunol Cell Biol. 2008 Jan;86(1):47-53. Epub 2007 Nov 13. Review.

PMID:
17998914
10.

Pax5 maintains cellular identity by repressing gene expression throughout B cell differentiation.

Carotta S, Holmes ML, Pridans C, Nutt SL.

Cell Cycle. 2006 Nov 1;5(21):2452-6. Epub 2006 Sep 12. Review.

PMID:
17102626
11.

Repression of Flt3 by Pax5 is crucial for B-cell lineage commitment.

Holmes ML, Carotta S, Corcoran LM, Nutt SL.

Genes Dev. 2006 Apr 15;20(8):933-8.

12.

AML1-FOG2 fusion protein in myelodysplasia.

Chan EM, Comer EM, Brown FC, Richkind KE, Holmes ML, Chong BH, Shiffman R, Zhang DE, Slovak ML, Willman CL, Noguchi CT, Li Y, Heiber DJ, Kwan L, Chan RJ, Vance GH, Ramsey HC, Hromas RA.

Blood. 2005 Jun 1;105(11):4523-6. Epub 2005 Feb 10.

13.

Novel azido and isothiocyanato analogues of [3-(4-phenylalkylpiperazin-1-yl)propyl]bis(4-fluorophenyl)amines as potential irreversible ligands for the dopamine transporter.

Cao J, Lever JR, Kopajtic T, Katz JL, Pham AT, Holmes ML, Justice JB, Newman AH.

J Med Chem. 2004 Dec 2;47(25):6128-36.

PMID:
15566284
14.

Protein-protein interaction between Fli-1 and GATA-1 mediates synergistic expression of megakaryocyte-specific genes through cooperative DNA binding.

Eisbacher M, Holmes ML, Newton A, Hogg PJ, Khachigian LM, Crossley M, Chong BH.

Mol Cell Biol. 2003 May;23(10):3427-41. Erratum in: Mol Cell Biol. 2004 Jun;24(11):5088.

15.

Taxonomic characterization of Haloferax sp. (" H. alicantei") strain Aa 2.2: description of Haloferax lucentensis sp. nov.

Gutierrez MC, Kamekura M, Holmes ML, Dyall-Smith ML, Ventosa A.

Extremophiles. 2002 Dec;6(6):479-83. Epub 2002 Jul 30.

PMID:
12486456
16.

Cloning and analysis of the thrombopoietin-induced megakaryocyte-specific glycoprotein VI promoter and its regulation by GATA-1, Fli-1, and Sp1.

Holmes ML, Bartle N, Eisbacher M, Chong BH.

J Biol Chem. 2002 Dec 13;277(50):48333-41. Epub 2002 Sep 30.

18.

Sequence and expression of a halobacterial beta-galactosidase gene.

Holmes ML, Dyall-Smith ML.

Mol Microbiol. 2000 Apr;36(1):114-22.

19.

Identification of Id2 as a globin regulatory protein by representational difference analysis of K562 cells induced to express gamma-globin with a fungal compound.

Holmes ML, Haley JD, Cerruti L, Zhou WL, Zogos H, Smith DE, Cunningham JM, Jane SM.

Mol Cell Biol. 1999 Jun;19(6):4182-90.

20.

Characterization of feline immunodeficiency virus integrase and analysis of functional domains.

Shibagaki Y, Holmes ML, Appa RS, Chow SA.

Virology. 1997 Mar 31;230(1):1-10.

21.

Purification and analysis of an extremely halophilic beta-galactosidase from Haloferax alicantei.

Holmes ML, Scopes RK, Moritz RL, Simpson RJ, Englert C, Pfeifer F, Dyall-Smith ML.

Biochim Biophys Acta. 1997 Feb 8;1337(2):276-86.

PMID:
9048905
22.

Analysis of the halobacterial plasmid pHK2 minimal replicon.

Holmes ML, Pfeifer F, Dyall-Smith ML.

Gene. 1995 Feb 3;153(1):117-21.

PMID:
7883174
24.

Construction and use of halobacterial shuttle vectors and further studies on Haloferax DNA gyrase.

Holmes ML, Nuttall SD, Dyall-Smith ML.

J Bacteriol. 1991 Jun;173(12):3807-13.

25.
26.

The halophilic archaebacteria Hb. lacusprofundi and Hb. saccharovorum are closely related: 16S rRNA sequence comparison.

Holmes ML, Olsen GJ, Dyall-Smith ML.

Nucleic Acids Res. 1990 Aug 11;18(15):4607. No abstract available.

27.

A plasmid vector with a selectable marker for halophilic archaebacteria.

Holmes ML, Dyall-Smith ML.

J Bacteriol. 1990 Feb;172(2):756-61.

28.

Psych. clinical nurse specialist spotlighted.

Carter CJ, Holmes ML.

N J Nurse. 1983 Jul-Aug;13(4):10. No abstract available.

PMID:
6579491
29.

Submarine seepage of natural gas in norton sound, alaska.

Cline JD, Holmes ML.

Science. 1977 Dec 16;198(4322):1149-53.

PMID:
17818933

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