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C-H Olefination of Tryptophan Residues in Peptides: Control of Residue Selectivity and Peptide-Amino Acid Cross-linking.

Terrey MJ, Holmes A, Perry CC, Cross WB.

Org Lett. 2019 Sep 16. doi: 10.1021/acs.orglett.9b02894. [Epub ahead of print]


Unique and Shared Epigenetic Programs of the CREBBP and EP300 Acetyltransferases in Germinal Center B Cells Reveal Targetable Dependencies in Lymphoma.

Meyer SN, Scuoppo C, Vlasevska S, Bal E, Holmes AB, Holloman M, Garcia-Ibanez L, Nataraj S, Duval R, Vantrimpont T, Basso K, Brooks N, Dalla-Favera R, Pasqualucci L.

Immunity. 2019 Aug 28. pii: S1074-7613(19)30332-2. doi: 10.1016/j.immuni.2019.08.006. [Epub ahead of print]


Somatosensory-Motor Dysconnectivity Spans Multiple Transdiagnostic Dimensions of Psychopathology.

Kebets V, Holmes AJ, Orban C, Tang S, Li J, Sun N, Kong R, Poldrack RA, Yeo BTT.

Biol Psychiatry. 2019 Jun 25. pii: S0006-3223(19)31475-1. doi: 10.1016/j.biopsych.2019.06.013. [Epub ahead of print]


Correction: Glutamate transporters: a broad review of the most recent archaeal and human structures.

Pavić A, Holmes AOM, Postis VLG, Goldman A.

Biochem Soc Trans. 2019 Sep 5. pii: BST-2019-0316_COR. doi: 10.1042/BST-2019-0316_COR. [Epub ahead of print] No abstract available.


"Celebrating the 20th Anniversary of To Err is Human".

Cooper MR, Holmes A, Seid A, Gonzalez CE, MacDonald LQ.

Am J Med Qual. 2019 Sep/Oct;34(5):519-520. doi: 10.1177/1062860619870639. No abstract available.


The effect of target/masker fundamental frequency contour similarity on masked-speech recognition.

Calandruccio L, Wasiuk PA, Buss E, Leibold LJ, Kong J, Holmes A, Oleson J.

J Acoust Soc Am. 2019 Aug;146(2):1065. doi: 10.1121/1.5121314.


Toward Robust Anxiety Biomarkers: A Machine Learning Approach in a Large-Scale Sample.

Boeke EA, Holmes AJ, Phelps EA.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2019 Jun 21. pii: S2451-9022(19)30171-5. doi: 10.1016/j.bpsc.2019.05.018. [Epub ahead of print]


The potential for inadvertent adverse consequences of open disclosure in Australia: when good intentions cause further harm.

Holmes A, Bugeja L, Ranson D, Griffths D, Ibrahim JE.

Med Sci Law. 2019 Aug 25:25802419872049. doi: 10.1177/0025802419872049. [Epub ahead of print] No abstract available.


Improving the estimation of the global burden of antimicrobial resistant infections.

Limmathurotsakul D, Dunachie S, Fukuda K, Feasey NA, Okeke IN, Holmes AH, Moore CE, Dolecek C, van Doorn HR, Shetty N, Lopez AD, Peacock SJ; Surveillance and Epidemiology of Drug Resistant Infections Consortium (SEDRIC).

Lancet Infect Dis. 2019 Aug 16. pii: S1473-3099(19)30276-2. doi: 10.1016/S1473-3099(19)30276-2. [Epub ahead of print] Review.


International Society for Infectious Diseases - First series of position papers, with a focus on implementing infection prevention and control measures in low- and middle-income settings.

Bulabula ANH, Holmes A, Lassmann B.

Int J Infect Dis. 2019 Aug 14;87:30-31. doi: 10.1016/j.ijid.2019.08.009. [Epub ahead of print] No abstract available.


Picornaviruses and RNA Metabolism: Local and Global Effects of Infection.

Holmes AC, Semler BL.

J Virol. 2019 Aug 14. pii: JVI.02088-17. doi: 10.1128/JVI.02088-17. [Epub ahead of print] Review.


Glutamate transporters: a broad review of the most recent archaeal and human structures.

Pavić A, Holmes AOM, Postis VLG, Goldman A.

Biochem Soc Trans. 2019 Aug 30;47(4):1197-1207. doi: 10.1042/BST20190316. Epub 2019 Aug 5. Review. Erratum in: Biochem Soc Trans. 2019 Sep 5;:.


Automated image analysis with ImageJ of yeast colony forming units from cannabis flowers.

Stolze N, Bader C, Henning C, Mastin J, Holmes AE, Sutlief AL.

J Microbiol Methods. 2019 Sep;164:105681. doi: 10.1016/j.mimet.2019.105681. Epub 2019 Aug 2.


Medication Exposure Patterns in Primary Care Patients Prescribed Pharmacogenetically Actionable Opioids.

Knisely MR, Carpenter JS, Broome ME, Holmes AM, Von Ah D, Skaar T, Draucker CB.

Qual Rep. 2018 Aug;23(8):1861-1875. Epub 2018 Aug 7.


Understanding determinants of infection control practices in surgery: the role of shared ownership and team hierarchy.

Troughton R, Mariano V, Campbell A, Hettiaratchy S, Holmes A, Birgand G.

Antimicrob Resist Infect Control. 2019 Jul 15;8:116. doi: 10.1186/s13756-019-0565-8. eCollection 2019.


High-Throughput Analysis of Optical Mapping Data Using ElectroMap.

O'Shea C, Holmes AP, Yu TY, Winter J, Wells SP, Parker BA, Fobian D, Johnson DM, Correia J, Kirchhof P, Fabritz L, Rajpoot K, Pavlovic D.

J Vis Exp. 2019 Jun 4;(148). doi: 10.3791/59663.


A Discrete Dorsal Raphe to Basal Amygdala 5-HT Circuit Calibrates Aversive Memory.

Sengupta A, Holmes A.

Neuron. 2019 Aug 7;103(3):489-505.e7. doi: 10.1016/j.neuron.2019.05.029. Epub 2019 Jun 13.


The AWaRe point prevalence study index: simplifying surveillance of antibiotic use in paediatrics.

Islam MS, Charani E, Holmes AH.

Lancet Glob Health. 2019 Jul;7(7):e811-e812. doi: 10.1016/S2214-109X(19)30162-7. No abstract available.


Artificial intelligence can improve decision-making in infection management.

Rawson TM, Ahmad R, Toumazou C, Georgiou P, Holmes AH.

Nat Hum Behav. 2019 Jun;3(6):543-545. doi: 10.1038/s41562-019-0583-9. No abstract available.


Central Amygdala Prepronociceptin-Expressing Neurons Mediate Palatable Food Consumption and Reward.

Hardaway JA, Halladay LR, Mazzone CM, Pati D, Bloodgood DW, Kim M, Jensen J, DiBerto JF, Boyt KM, Shiddapur A, Erfani A, Hon OJ, Neira S, Stanhope CM, Sugam JA, Saddoris MP, Tipton G, McElligott Z, Jhou TC, Stuber GD, Bruchas MR, Bulik CM, Holmes A, Kash TL.

Neuron. 2019 Jun 5;102(5):1088. doi: 10.1016/j.neuron.2019.04.036. No abstract available.


Thermodynamically stable and genetically unstable G-quadruplexes are depleted in genomes across species.

Puig Lombardi E, Holmes A, Verga D, Teulade-Fichou MP, Nicolas A, Londoño-Vallejo A.

Nucleic Acids Res. 2019 Jul 9;47(12):6098-6113. doi: 10.1093/nar/gkz463.


Framework for DNA Quantification and Outlier Detection Using Multidimensional Standard Curves.

Moniri A, Rodriguez-Manzano J, Malpartida-Cardenas K, Yu LS, Didelot X, Holmes A, Georgiou P.

Anal Chem. 2019 Jun 4;91(11):7426-7434. doi: 10.1021/acs.analchem.9b01466. Epub 2019 May 14.


Parkinson's disease and the gastrointestinal microbiome.

Lubomski M, Tan AH, Lim SY, Holmes AJ, Davis RL, Sue CM.

J Neurol. 2019 Apr 30. doi: 10.1007/s00415-019-09320-1. [Epub ahead of print] Review.


Central Amygdala Prepronociceptin-Expressing Neurons Mediate Palatable Food Consumption and Reward.

Hardaway JA, Halladay LR, Mazzone CM, Pati D, Bloodgood DW, Kim M, Jensen J, DiBerto JF, Boyt KM, Shiddapur A, Erfani A, Hon OJ, Neira S, Stanhope CM, Sugam JA, Saddoris MP, Tipton G, McElligott Z, Jhou TC, Stuber GD, Bruchas MR, Bulik CM, Holmes A, Kash TL.

Neuron. 2019 Jun 5;102(5):1037-1052.e7. doi: 10.1016/j.neuron.2019.03.037. Epub 2019 Apr 24. Erratum in: Neuron. 2019 Jun 5;102(5):1088.


Hypothermia in an Adolescent Due to Probable Drug-Drug Interaction Involving Clobazam.

Parman MG, Holmes AP.

J Pediatr Pharmacol Ther. 2019 Mar-Apr;24(2):156-159. doi: 10.5863/1551-6776-24.2.156.


The crystal structure of dGTPase reveals the molecular basis of dGTP selectivity.

Barnes CO, Wu Y, Song J, Lin G, Baxter EL, Brewster AS, Nagarajan V, Holmes A, Soltis SM, Sauter NK, Ahn J, Cohen AE, Calero G.

Proc Natl Acad Sci U S A. 2019 May 7;116(19):9333-9339. doi: 10.1073/pnas.1814999116. Epub 2019 Apr 24.


Effect on Health Care Expenditures During Nationwide Implementation of the Diabetes Prevention Program as a Health Insurance Benefit.

Ackermann RT, Kang R, Cooper AJ, Liss DT, Holmes AM, Moran M, Saha C.

Diabetes Care. 2019 Sep;42(9):1776-1783. doi: 10.2337/dc18-2071. Epub 2019 Apr 22.


Connectivity of rapid-testing diagnostics and surveillance of infectious diseases.

Ming D, Rawson T, Sangkaew S, Rodriguez-Manzano J, Georgiou P, Holmes A.

Bull World Health Organ. 2019 Mar 1;97(3):242-244. doi: 10.2471/BLT.18.219691. Epub 2019 Feb 4. No abstract available.


Functional connectomics of affective and psychotic pathology.

Baker JT, Dillon DG, Patrick LM, Roffman JL, Brady RO Jr, Pizzagalli DA, Öngür D, Holmes AJ.

Proc Natl Acad Sci U S A. 2019 Apr 30;116(18):9050-9059. doi: 10.1073/pnas.1820780116. Epub 2019 Apr 15.


Global signal regression strengthens association between resting-state functional connectivity and behavior.

Li J, Kong R, Liégeois R, Orban C, Tan Y, Sun N, Holmes AJ, Sabuncu MR, Ge T, Yeo BTT.

Neuroimage. 2019 Aug 1;196:126-141. doi: 10.1016/j.neuroimage.2019.04.016. Epub 2019 Apr 8.


A multilevel neo-institutional analysis of infection prevention and control in English hospitals: coerced safety culture change?

Kyratsis Y, Ahmad R, Iwami M, Castro-Sánchez E, Atun R, Holmes AH.

Sociol Health Illn. 2019 Jul;41(6):1138-1158. doi: 10.1111/1467-9566.12897. Epub 2019 Apr 11.


Development of a Minimally Invasive Microneedle-Based Sensor for Continuous Monitoring of β-Lactam Antibiotic Concentrations in Vivo.

Gowers SAN, Freeman DME, Rawson TM, Rogers ML, Wilson RC, Holmes AH, Cass AE, O'Hare D.

ACS Sens. 2019 Apr 26;4(4):1072-1080. doi: 10.1021/acssensors.9b00288. Epub 2019 Apr 17.


The natural history of vascular and other complications in patients treated with nilotinib for chronic myeloid leukemia.

Minson AG, Cummins K, Fox L, Costello B, Yeung D, Cleary R, Forsyth C, Tatarczuch M, Burbury K, Motorna O, Shortt J, Fleming S, McQuillan A, Schwarer A, Harrup R, Holmes A, Ratnasingam S, Chan KL, Hsu WH, Ashraf A, Putt F, Grigg A.

Blood Adv. 2019 Apr 9;3(7):1084-1091. doi: 10.1182/bloodadvances.2018028035.


Models of care for neonatal abstinence syndrome: What works?

Whalen BL, Holmes AV, Blythe S.

Semin Fetal Neonatal Med. 2019 Apr;24(2):121-132. doi: 10.1016/j.siny.2019.01.004. Epub 2019 Jan 29. Review.


A whole-health-economy approach to antimicrobial stewardship: Analysis of current models and future direction.

McLeod M, Ahmad R, Shebl NA, Micallef C, Sim F, Holmes A.

PLoS Med. 2019 Mar 29;16(3):e1002774. doi: 10.1371/journal.pmed.1002774. eCollection 2019 Mar.


Ingestion of resistant starch by mice markedly increases microbiome-derived metabolites.

Koay YC, Wali JA, Luk AWS, Macia L, Cogger VC, Pulpitel TJ, Wahl D, Solon-Biet SM, Holmes A, Simpson SJ, O'Sullivan JF.

FASEB J. 2019 Jul;33(7):8033-8042. doi: 10.1096/fj.201900177R. Epub 2019 Mar 29.


Deaths due to thermal injury from cigarette smoking in a 13-year national cohort of nursing home residents.

Holmes AL, Bugeja L, Young C, Ibrahim JE.

Int J Older People Nurs. 2019 Sep;14(3):e12233. doi: 10.1111/opn.12233. Epub 2019 Mar 29.


Evaluation of Lactation Compatibility Reference Recommendations.

Holmes AP, Harris JB, Ware S.

Ann Pharmacother. 2019 Sep;53(9):899-904. doi: 10.1177/1060028019839389. Epub 2019 Mar 24.


Cardiac Optogenetics and Optical Mapping - Overcoming Spectral Congestion in All-Optical Cardiac Electrophysiology.

O'Shea C, Holmes AP, Winter J, Correia J, Ou X, Dong R, He S, Kirchhof P, Fabritz L, Rajpoot K, Pavlovic D.

Front Physiol. 2019 Mar 7;10:182. doi: 10.3389/fphys.2019.00182. eCollection 2019. Review.


Extragenic Suppression of Elongation Factor P Gene Mutant Phenotypes in Erwinia amylovora.

Klee SM, Sinn JP, Holmes AC, Lehman BL, Krawczyk T, Peter KA, McNellis TW.

J Bacteriol. 2019 May 8;201(11). pii: e00722-18. doi: 10.1128/JB.00722-18. Print 2019 Jun 1.


Optical Characterization of Zinc Pyrithione.

Sandiford L, Holmes AM, Mangion SE, Mohammed YH, Zvyagin AV, Roberts MS.

Photochem Photobiol. 2019 Mar 18. doi: 10.1111/php.13100. [Epub ahead of print]


Creating Consensus: Revisiting the Emergency Medicine Resident Scholarly Activity Requirement.

Kane BG, Totten VY, Kraus CK, Allswede M, Diercks DB, Garg N, Ling L, McDonald EN, Rosenau AM, Wilk M, Holmes AD, Hemminger A, Greenberg MR.

West J Emerg Med. 2019 Mar;20(2):369-375. doi: 10.5811/westjem.2018.10.39293. Epub 2018 Dec 5.


Managing risk for aging patients in long-term care: a narrative review of practices to support communication, documentation, and safe patient care practices.

Ibrahim JE, Holmes A, Young C, Bugeja L.

Risk Manag Healthc Policy. 2019 Feb 27;12:31-39. doi: 10.2147/RMHP.S159073. eCollection 2019. Review.


Adherence to antibiotic guidelines and reported penicillin allergy: pooled cohort data on prescribing and allergy documentation from two English National Health Service (NHS) trusts.

Phillips CJ, Gilchrist M, Cooke FJ, Franklin BD, Enoch DA, Murphy ME, Santos R, Brannigan ET, Holmes AH.

BMJ Open. 2019 Mar 1;9(2):e026624. doi: 10.1136/bmjopen-2018-026624.


Antibiotic management of urinary tract infection in elderly patients in primary care and its association with bloodstream infections and all cause mortality: population based cohort study.

Gharbi M, Drysdale JH, Lishman H, Goudie R, Molokhia M, Johnson AP, Holmes AH, Aylin P.

BMJ. 2019 Feb 27;364:l525. doi: 10.1136/bmj.l525.


Implementation of antibiotic stewardship in different settings - results of an international survey.

Charani E, Castro-Sanchéz E, Bradley S, Nathwani D, Holmes AH, Davey P.

Antimicrob Resist Infect Control. 2019 Feb 12;8:34. doi: 10.1186/s13756-019-0493-7. eCollection 2019.


Case report on intravenous octreotide for the treatment of intraoperative vasoplegia following thymoma resection.

Williams WH 3rd, Browne RC, Bui TP, Holmes AA, Thakar D.

SAGE Open Med Case Rep. 2019 Feb 8;7:2050313X19827744. doi: 10.1177/2050313X19827744. eCollection 2019.


Global infection prevention gaps, needs, and utilization of educational resources: A cross-sectional assessment by the International Society for Infectious Diseases.

Desai AN, Ramatowski JW, Lassmann B, Holmes A, Mehtar S, Bearman G.

Int J Infect Dis. 2019 May;82:54-60. doi: 10.1016/j.ijid.2019.02.017. Epub 2019 Feb 19.


Correction: Behavioral and synaptic alterations relevant to obsessivecompulsive disorder in mice with increased EAAT3 expression.

Delgado-Acevedo C, Estay SF, Radke AK, Sengupta A, Escobar AP, Henríquez-Belmar F, Reyes CA, Haro-Acuña V, Utreras E, Sotomayor-Zárate R, Cho A, Wendland JR, Kulkarni AB, Holmes A, Murphy DL, Chávez AE, Moya PR.

Neuropsychopharmacology. 2019 May;44(6):1177. doi: 10.1038/s41386-019-0331-x.

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