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Items: 1 to 50 of 79

1.

The Genomic Basis for Short-Term Evolution of Environmental Adaptation in Maize.

Wisser RJ, Fang Z, Holland JB, Teixeira JEC, Dougherty J, Weldekidan T, de Leon N, Flint-Garcia S, Lauter N, Murray SC, Xu W, Hallauer A.

Genetics. 2019 Oct 15. pii: genetics.302780.2019. doi: 10.1534/genetics.119.302780. [Epub ahead of print]

2.

Validation and Characterization of Maize Multiple Disease Resistance QTL.

Martins LB, Rucker E, Thomason W, Wisser RJ, Holland JB, Balint-Kurti P.

G3 (Bethesda). 2019 Sep 4;9(9):2905-2912. doi: 10.1534/g3.119.400195.

3.

The genetic architecture of teosinte catalyzed and constrained maize domestication.

Yang CJ, Samayoa LF, Bradbury PJ, Olukolu BA, Xue W, York AM, Tuholski MR, Wang W, Daskalska LL, Neumeyer MA, Sanchez-Gonzalez JJ, Romay MC, Glaubitz JC, Sun Q, Buckler ES, Holland JB, Doebley JF.

Proc Natl Acad Sci U S A. 2019 Mar 19;116(12):5643-5652. doi: 10.1073/pnas.1820997116. Epub 2019 Mar 6.

4.

Diverse Components of Resistance to Fusarium verticillioides Infection and Fumonisin Contamination in Four Maize Recombinant Inbred Families.

Morales L, Zila CT, Moreta Mejía DE, Montoya Arbelaez M, Balint-Kurti PJ, Holland JB, Nelson RJ.

Toxins (Basel). 2019 Feb 1;11(2). pii: E86. doi: 10.3390/toxins11020086.

5.

Training population selection and use of fixed effects to optimize genomic predictions in a historical USA winter wheat panel.

Sarinelli JM, Murphy JP, Tyagi P, Holland JB, Johnson JW, Mergoum M, Mason RE, Babar A, Harrison S, Sutton R, Griffey CA, Brown-Guedira G.

Theor Appl Genet. 2019 Apr;132(4):1247-1261. doi: 10.1007/s00122-019-03276-6. Epub 2019 Jan 24.

6.

Optimal Designs for Genomic Selection in Hybrid Crops.

Guo T, Yu X, Li X, Zhang H, Zhu C, Flint-Garcia S, McMullen MD, Holland JB, Szalma SJ, Wisser RJ, Yu J.

Mol Plant. 2019 Mar 4;12(3):390-401. doi: 10.1016/j.molp.2018.12.022. Epub 2019 Jan 6.

PMID:
30625380
7.

A Genome Wide Association Study Reveals Markers and Genes Associated with Resistance to Fusarium verticillioides Infection of Seedlings in a Maize Diversity Panel.

Stagnati L, Lanubile A, Samayoa LF, Bragalanti M, Giorni P, Busconi M, Holland JB, Marocco A.

G3 (Bethesda). 2019 Feb 7;9(2):571-579. doi: 10.1534/g3.118.200916.

8.

Plant Genetics: Two Steps on the Path to Maize Adaptation.

Holland JB.

Curr Biol. 2018 Sep 24;28(18):R1098-R1101. doi: 10.1016/j.cub.2018.07.049.

9.

Dissecting Symptomatology and Fumonisin Contamination Produced by Fusarium verticillioides in Maize Ears.

Morales L, Marino TP, Wenndt AJ, Fouts JQ, Holland JB, Nelson RJ.

Phytopathology. 2018 Dec;108(12):1475-1485. doi: 10.1094/PHYTO-05-18-0167-R. Epub 2018 Nov 5.

PMID:
29989846
10.

Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets.

AlKhalifah N, Campbell DA, Falcon CM, Gardiner JM, Miller ND, Romay MC, Walls R, Walton R, Yeh CT, Bohn M, Bubert J, Buckler ES, Ciampitti I, Flint-Garcia S, Gore MA, Graham C, Hirsch C, Holland JB, Hooker D, Kaeppler S, Knoll J, Lauter N, Lee EC, Lorenz A, Lynch JP, Moose SP, Murray SC, Nelson R, Rocheford T, Rodriguez O, Schnable JC, Scully B, Smith M, Springer N, Thomison P, Tuinstra M, Wisser RJ, Xu W, Ertl D, Schnable PS, De Leon N, Spalding EP, Edwards J, Lawrence-Dill CJ.

BMC Res Notes. 2018 Jul 9;11(1):452. doi: 10.1186/s13104-018-3508-1.

11.

Accounting for Genotype-by-Environment Interactions and Residual Genetic Variation in Genomic Selection for Water-Soluble Carbohydrate Concentration in Wheat.

Ovenden B, Milgate A, Wade LJ, Rebetzke GJ, Holland JB.

G3 (Bethesda). 2018 May 31;8(6):1909-1919. doi: 10.1534/g3.118.200038.

12.

Ecogeography of teosinte.

Sánchez González JJ, Ruiz Corral JA, García GM, Ojeda GR, Larios LC, Holland JB, Medrano RM, García Romero GE.

PLoS One. 2018 Feb 16;13(2):e0192676. doi: 10.1371/journal.pone.0192676. eCollection 2018.

13.

Defining the Role of the MADS-Box Gene, Zea Agamous-like1, a Target of Selection During Maize Domestication.

Wills DM, Fang Z, York AM, Holland JB, Doebley JF.

J Hered. 2018 Mar 16;109(3):333-338. doi: 10.1093/jhered/esx073.

PMID:
28992108
14.

Selection for water-soluble carbohydrate accumulation and investigation of genetic × environment interactions in an elite wheat breeding population.

Ovenden B, Milgate A, Lisle C, Wade LJ, Rebetzke GJ, Holland JB.

Theor Appl Genet. 2017 Nov;130(11):2445-2461. doi: 10.1007/s00122-017-2969-2. Epub 2017 Aug 29.

PMID:
28852799
15.

Genome-Wide Associations for Water-Soluble Carbohydrate Concentration and Relative Maturity in Wheat Using SNP and DArT Marker Arrays.

Ovenden B, Milgate A, Wade LJ, Rebetzke GJ, Holland JB.

G3 (Bethesda). 2017 Aug 7;7(8):2821-2830. doi: 10.1534/g3.117.039842.

16.

Enhancing genomic prediction with genome-wide association studies in multiparental maize populations.

Bian Y, Holland JB.

Heredity (Edinb). 2017 Jun;118(6):585-593. doi: 10.1038/hdy.2017.4. Epub 2017 Feb 15.

17.

High-Throughput Resequencing of Maize Landraces at Genomic Regions Associated with Flowering Time.

Jamann TM, Sood S, Wisser RJ, Holland JB.

PLoS One. 2017 Jan 3;12(1):e0168910. doi: 10.1371/journal.pone.0168910. eCollection 2017.

18.

Modifications to a LATE MERISTEM IDENTITY1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.).

Andres RJ, Coneva V, Frank MH, Tuttle JR, Samayoa LF, Han SW, Kaur B, Zhu L, Fang H, Bowman DT, Rojas-Pierce M, Haigler CH, Jones DC, Holland JB, Chitwood DH, Kuraparthy V.

Proc Natl Acad Sci U S A. 2017 Jan 3;114(1):E57-E66. doi: 10.1073/pnas.1613593114. Epub 2016 Dec 20.

19.

The Genetics of Leaf Flecking in Maize and Its Relationship to Plant Defense and Disease Resistance.

Olukolu BA, Bian Y, De Vries B, Tracy WF, Wisser RJ, Holland JB, Balint-Kurti PJ.

Plant Physiol. 2016 Nov;172(3):1787-1803. Epub 2016 Sep 26.

20.

Genetic Architecture of Domestication-Related Traits in Maize.

Xue S, Bradbury PJ, Casstevens T, Holland JB.

Genetics. 2016 Sep;204(1):99-113. doi: 10.1534/genetics.116.191106. Epub 2016 Jul 13.

21.

MAGIC maize: a new resource for plant genetics.

Holland JB.

Genome Biol. 2015 Sep 11;16:163. doi: 10.1186/s13059-015-0713-2.

22.

Ensemble Learning of QTL Models Improves Prediction of Complex Traits.

Bian Y, Holland JB.

G3 (Bethesda). 2015 Aug 13;5(10):2073-84. doi: 10.1534/g3.115.021121.

23.

QTL mapping using high-throughput sequencing.

Jamann TM, Balint-Kurti PJ, Holland JB.

Methods Mol Biol. 2015;1284:257-85. doi: 10.1007/978-1-4939-2444-8_13. Review.

PMID:
25757777
24.

Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel.

Samayoa LF, Malvar RA, Olukolu BA, Holland JB, Butrón A.

BMC Plant Biol. 2015 Feb 5;15:35. doi: 10.1186/s12870-014-0403-3.

25.

New insight into a complex plant-fungal pathogen interaction.

Balint-Kurti PJ, Holland JB.

Nat Genet. 2015 Feb;47(2):101-3. doi: 10.1038/ng.3203.

PMID:
25627898
26.

Joint-multiple family linkage analysis predicts within-family variation better than single-family analysis of the maize nested association mapping population.

Ogut F, Bian Y, Bradbury PJ, Holland JB.

Heredity (Edinb). 2015 Jun;114(6):552-63. doi: 10.1038/hdy.2014.123. Epub 2015 Jan 14.

27.

Genome-wide association study of Fusarium ear rot disease in the U.S.A. maize inbred line collection.

Zila CT, Ogut F, Romay MC, Gardner CA, Buckler ES, Holland JB.

BMC Plant Biol. 2014 Dec 30;14:372. doi: 10.1186/s12870-014-0372-6.

28.

Limits on the reproducibility of marker associations with southern leaf blight resistance in the maize nested association mapping population.

Bian Y, Yang Q, Balint-Kurti PJ, Wisser RJ, Holland JB.

BMC Genomics. 2014 Dec 5;15:1068. doi: 10.1186/1471-2164-15-1068.

29.

Hallauer's Tusón: a decade of selection for tropical-to-temperate phenological adaptation in maize.

Teixeira JE, Weldekidan T, de Leon N, Flint-Garcia S, Holland JB, Lauter N, Murray SC, Xu W, Hessel DA, Kleintop AE, Hawk JA, Hallauer A, Wisser RJ.

Heredity (Edinb). 2015 Feb;114(2):229-40. doi: 10.1038/hdy.2014.90. Epub 2014 Nov 5.

30.

A genome-wide association study of the maize hypersensitive defense response identifies genes that cluster in related pathways.

Olukolu BA, Wang GF, Vontimitta V, Venkata BP, Marla S, Ji J, Gachomo E, Chu K, Negeri A, Benson J, Nelson R, Bradbury P, Nielsen D, Holland JB, Balint-Kurti PJ, Johal G.

PLoS Genet. 2014 Aug 28;10(8):e1004562. doi: 10.1371/journal.pgen.1004562. eCollection 2014 Aug.

31.

Insights into the effects of long-term artificial selection on seed size in maize.

Hirsch CN, Flint-Garcia SA, Beissinger TM, Eichten SR, Deshpande S, Barry K, McMullen MD, Holland JB, Buckler ES, Springer N, Buell CR, de Leon N, Kaeppler SM.

Genetics. 2014 Sep;198(1):409-21. doi: 10.1534/genetics.114.167155. Epub 2014 Jul 17.

32.

Protein Profiling Reveals Novel Proteins in Pollen and Pistil of W22 (ga1; Ga1) in Maize.

Yu J, Roy SK, Kamal AH, Cho K, Kwon SJ, Cho SW, So YS, Holland JB, Woo SH.

Proteomes. 2014 May 5;2(2):258-271. doi: 10.3390/proteomes2020258.

33.

The genetic architecture of maize height.

Peiffer JA, Romay MC, Gore MA, Flint-Garcia SA, Zhang Z, Millard MJ, Gardner CA, McMullen MD, Holland JB, Bradbury PJ, Buckler ES.

Genetics. 2014 Apr;196(4):1337-56. doi: 10.1534/genetics.113.159152. Epub 2014 Feb 10.

34.

A genome-wide association study reveals genes associated with fusarium ear rot resistance in a maize core diversity panel.

Zila CT, Samayoa LF, Santiago R, Butrón A, Holland JB.

G3 (Bethesda). 2013 Nov 6;3(11):2095-104. doi: 10.1534/g3.113.007328.

35.

Comprehensive genotyping of the USA national maize inbred seed bank.

Romay MC, Millard MJ, Glaubitz JC, Peiffer JA, Swarts KL, Casstevens TM, Elshire RJ, Acharya CB, Mitchell SE, Flint-Garcia SA, McMullen MD, Holland JB, Buckler ES, Gardner CA.

Genome Biol. 2013 Jun 11;14(6):R55. doi: 10.1186/gb-2013-14-6-r55.

36.

Multivariate mixed linear model analysis of longitudinal data: an information-rich statistical technique for analyzing plant disease resistance.

Veturi Y, Kump K, Walsh E, Ott O, Poland J, Kolkman JM, Balint-Kurti PJ, Holland JB, Wisser RJ.

Phytopathology. 2012 Nov;102(11):1016-25. doi: 10.1094/PHYTO-10-11-0268.

37.

ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize.

Hung HY, Shannon LM, Tian F, Bradbury PJ, Chen C, Flint-Garcia SA, McMullen MD, Ware D, Buckler ES, Doebley JF, Holland JB.

Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):E1913-21. doi: 10.1073/pnas.1203189109. Epub 2012 Jun 18.

38.

QTL Controlling Masculinization of Ear Tips in a Maize (Zea mays L.) Intraspecific Cross.

Holland JB, Coles ND.

G3 (Bethesda). 2011 Oct;1(5):337-41. doi: 10.1534/g3.111.000786. Epub 2011 Oct 1.

39.

Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels.

Cook JP, McMullen MD, Holland JB, Tian F, Bradbury P, Ross-Ibarra J, Buckler ES, Flint-Garcia SA.

Plant Physiol. 2012 Feb;158(2):824-34. doi: 10.1104/pp.111.185033. Epub 2011 Dec 1.

40.

Distinct genetic architectures for male and female inflorescence traits of maize.

Brown PJ, Upadyayula N, Mahone GS, Tian F, Bradbury PJ, Myles S, Holland JB, Flint-Garcia S, McMullen MD, Buckler ES, Rocheford TR.

PLoS Genet. 2011 Nov;7(11):e1002383. doi: 10.1371/journal.pgen.1002383. Epub 2011 Nov 17.

41.

The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population.

Hung HY, Browne C, Guill K, Coles N, Eller M, Garcia A, Lepak N, Melia-Hancock S, Oropeza-Rosas M, Salvo S, Upadyayula N, Buckler ES, Flint-Garcia S, McMullen MD, Rocheford TR, Holland JB.

Heredity (Edinb). 2012 May;108(5):490-9. doi: 10.1038/hdy.2011.103. Epub 2011 Oct 26.

42.

Three new teosintes (Zea spp., Poaceae) from México.

Sánchez G JJ, De La Cruz L L, Vidal M VA, Ron P J, Taba S, Santacruz-Ruvalcaba F, Sood S, Holland JB, Ruíz C JA, Carvajal S, Aragón C F, Chávez T VH, Morales R MM, Barba-González R.

Am J Bot. 2011 Sep;98(9):1537-48. doi: 10.3732/ajb.1100193. Epub 2011 Aug 29.

43.

Multivariate analysis of maize disease resistances suggests a pleiotropic genetic basis and implicates a GST gene.

Wisser RJ, Kolkman JM, Patzoldt ME, Holland JB, Yu J, Krakowsky M, Nelson RJ, Balint-Kurti PJ.

Proc Natl Acad Sci U S A. 2011 May 3;108(18):7339-44. doi: 10.1073/pnas.1011739108. Epub 2011 Apr 13.

44.

Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population.

Kump KL, Bradbury PJ, Wisser RJ, Buckler ES, Belcher AR, Oropeza-Rosas MA, Zwonitzer JC, Kresovich S, McMullen MD, Ware D, Balint-Kurti PJ, Holland JB.

Nat Genet. 2011 Feb;43(2):163-8. doi: 10.1038/ng.747. Epub 2011 Jan 9.

PMID:
21217757
45.

Genome-wide association study of leaf architecture in the maize nested association mapping population.

Tian F, Bradbury PJ, Brown PJ, Hung H, Sun Q, Flint-Garcia S, Rocheford TR, McMullen MD, Holland JB, Buckler ES.

Nat Genet. 2011 Feb;43(2):159-62. doi: 10.1038/ng.746. Epub 2011 Jan 9.

PMID:
21217756
46.

Genetic control of photoperiod sensitivity in maize revealed by joint multiple population analysis.

Coles ND, McMullen MD, Balint-Kurti PJ, Pratt RC, Holland JB.

Genetics. 2010 Mar;184(3):799-812. doi: 10.1534/genetics.109.110304. Epub 2009 Dec 14.

47.

Mapping resistance quantitative trait Loci for three foliar diseases in a maize recombinant inbred line population-evidence for multiple disease resistance?

Zwonitzer JC, Coles ND, Krakowsky MD, Arellano C, Holland JB, McMullen MD, Pratt RC, Balint-Kurti PJ.

Phytopathology. 2010 Jan;100(1):72-9. doi: 10.1094/PHYTO-100-1-0072.

48.

Direct mapping of density response in a population of B73 x Mo17 recombinant inbred lines of maize (Zea Mays L.).

Gonzalo M, Holland JB, Vyn TJ, McIntyre LM.

Heredity (Edinb). 2010 Jun;104(6):583-99. doi: 10.1038/hdy.2009.140. Epub 2009 Nov 4.

49.

Genetic properties of the maize nested association mapping population.

McMullen MD, Kresovich S, Villeda HS, Bradbury P, Li H, Sun Q, Flint-Garcia S, Thornsberry J, Acharya C, Bottoms C, Brown P, Browne C, Eller M, Guill K, Harjes C, Kroon D, Lepak N, Mitchell SE, Peterson B, Pressoir G, Romero S, Oropeza Rosas M, Salvo S, Yates H, Hanson M, Jones E, Smith S, Glaubitz JC, Goodman M, Ware D, Holland JB, Buckler ES.

Science. 2009 Aug 7;325(5941):737-40. doi: 10.1126/science.1174320.

50.

The genetic architecture of maize flowering time.

Buckler ES, Holland JB, Bradbury PJ, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroon DE, Larsson S, Lepak NK, Li H, Mitchell SE, Pressoir G, Peiffer JA, Rosas MO, Rocheford TR, Romay MC, Romero S, Salvo S, Sanchez Villeda H, da Silva HS, Sun Q, Tian F, Upadyayula N, Ware D, Yates H, Yu J, Zhang Z, Kresovich S, McMullen MD.

Science. 2009 Aug 7;325(5941):714-8. doi: 10.1126/science.1174276.

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