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Synthesis of Perdeuterated 1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine ([D82 ]POPC) and Characterisation of Its Lipid Bilayer Membrane Structure by Neutron Reflectometry.

Yepuri NR, Darwish TA, Krause-Heuer AM, Leung AE, Delhom R, Wacklin HP, Holden PJ.

Chempluschem. 2016 Mar;81(3):315-321. doi: 10.1002/cplu.201500452. Epub 2016 Jan 19.


The novel missense mutation Met48Lys in FKBP22 changes its structure and functions.

Ishikawa Y, Mizuno N, Holden P, Lim PJ, Gould DB, Rohrbach M, Giunta C, Bächinger HP.

Sci Rep. 2020 Jan 16;10(1):497. doi: 10.1038/s41598-019-57374-y.


Soybeans Grown with Carbonaceous Nanomaterials Maintain Nitrogen Stoichiometry by Assimilating Soil Nitrogen to Offset Impaired Dinitrogen Fixation.

Wang Y, Schimel JP, Nisbet RM, Gardea-Torresdey JL, Holden PA.

ACS Nano. 2019 Dec 18. doi: 10.1021/acsnano.9b06970. [Epub ahead of print]


Quantitative genetics of body size evolution on islands: an individual-based simulation approach.

Diniz-Filho JAF, Jardim L, Rangel TF, Holden PB, Edwards NR, Hortal J, Santos AMC, Raia P.

Biol Lett. 2019 Oct 31;15(10):20190481. doi: 10.1098/rsbl.2019.0481. Epub 2019 Oct 9.


Strategies for robust and accurate experimental approaches to quantify nanomaterial bioaccumulation across a broad range of organisms.

Petersen EJ, Mortimer M, Burgess RM, Handy R, Hanna S, Ho KT, Johnson M, Loureiro S, Selck H, Scott-Fordsmand JJ, Spurgeon D, Unrine J, van den Brink N, Wang Y, White J, Holden P.

Environ Sci Nano. 2019;6. doi: 10.1039/C8EN01378K.


Impact of metal oxide nanoparticles on in vitro DNA amplification.

Gao CH, Mortimer M, Zhang M, Holden PA, Cai P, Wu S, Xin Y, Wu Y, Huang Q.

PeerJ. 2019 Jun 27;7:e7228. doi: 10.7717/peerj.7228. eCollection 2019.


Deferoxamine: An Angiogenic and Antioxidant Molecule for Tissue Regeneration.

Holden P, Nair LS.

Tissue Eng Part B Rev. 2019 Dec;25(6):461-470. doi: 10.1089/ten.TEB.2019.0111. Epub 2019 Sep 11.


Calibrating temperature reconstructions from fish otolith oxygen isotope analysis for California's critically endangered Delta Smelt.

Willmes M, Lewis LS, Davis BE, Loiselle L, James HF, Denny C, Baxter R, Conrad JL, Fangue NA, Hung TC, Armstrong RA, Williams IS, Holden P, Hobbs JA.

Rapid Commun Mass Spectrom. 2019 Jul 30;33(14):1207-1220. doi: 10.1002/rcm.8464.


A rapid MS/MS method to assess the deuterium kinetic isotope effect and associated improvement in the metabolic stability of deuterated biological and pharmacological molecules as applied to an imaging agent.

Murphy RB, Wyatt NA, Fraser BH, Yepuri NR, Holden PJ, Wotherspoon ATL, Darwish TA.

Anal Chim Acta. 2019 Aug 8;1064:65-70. doi: 10.1016/j.aca.2019.02.025. Epub 2019 Feb 22.


Revisiting Antarctic ice loss due to marine ice-cliff instability.

Edwards TL, Brandon MA, Durand G, Edwards NR, Golledge NR, Holden PB, Nias IJ, Payne AJ, Ritz C, Wernecke A.

Nature. 2019 Feb;566(7742):58-64. doi: 10.1038/s41586-019-0901-4. Epub 2019 Feb 6.


Modeling the ecology and evolution of biodiversity: Biogeographical cradles, museums, and graves.

Rangel TF, Edwards NR, Holden PB, Diniz-Filho JAF, Gosling WD, Coelho MTP, Cassemiro FAS, Rahbek C, Colwell RK.

Science. 2018 Jul 20;361(6399). pii: eaar5452. doi: 10.1126/science.aar5452.


Carbonaceous Nanomaterials Have Higher Effects on Soybean Rhizosphere Prokaryotic Communities During the Reproductive Growth Phase than During Vegetative Growth.

Ge Y, Shen C, Wang Y, Sun YQ, Schimel JP, Gardea-Torresdey JL, Holden PA.

Environ Sci Technol. 2018 Jun 5;52(11):6636-6646. doi: 10.1021/acs.est.8b00937. Epub 2018 May 15.


Multiwall Carbon Nanotubes Induce More Pronounced Transcriptomic Responses in Pseudomonas aeruginosa PG201 than Graphene, Exfoliated Boron Nitride, or Carbon Black.

Mortimer M, Devarajan N, Li D, Holden PA.

ACS Nano. 2018 Mar 27;12(3):2728-2740. doi: 10.1021/acsnano.7b08977. Epub 2018 Feb 26.


Alginic Acid-Aided Dispersion of Carbon Nanotubes, Graphene, and Boron Nitride Nanomaterials for Microbial Toxicity Testing.

Wang Y, Mortimer M, Chang CH, Holden PA.

Nanomaterials (Basel). 2018 Jan 30;8(2). pii: E76. doi: 10.3390/nano8020076.


Azithromycin Pharmacodynamics against Persistent Haemophilus influenzae in Chronic Obstructive Pulmonary Disease.

Tsuji BT, Fisher J, Boadi-Yeboah R, Holden PN, Sethi S, Pettigrew MM, Murphy TF.

Antimicrob Agents Chemother. 2018 Jan 25;62(2). pii: e01995-17. doi: 10.1128/AAC.01995-17. Print 2018 Feb.


Heat shock protein 47 and 65-kDa FK506-binding protein weakly but synergistically interact during collagen folding in the endoplasmic reticulum.

Ishikawa Y, Holden P, Bächinger HP.

J Biol Chem. 2017 Oct 20;292(42):17216-17224. doi: 10.1074/jbc.M117.802298. Epub 2017 Aug 31.


Authentication of collagen VI antibodies.

Endicott J, Holden P, Fitzgerald J.

BMC Res Notes. 2017 Jul 29;10(1):358. doi: 10.1186/s13104-017-2674-x.


Polymyxin Combinations Combat Escherichia coli Harboring mcr-1 and blaNDM-5: Preparation for a Postantibiotic Era.

Bulman ZP, Chen L, Walsh TJ, Satlin MJ, Qian Y, Bulitta JB, Peloquin CA, Holden PN, Nation RL, Li J, Kreiswirth BN, Tsuji BT.

mBio. 2017 Jul 25;8(4). pii: e00540-17. doi: 10.1128/mBio.00540-17.


Visualization and Quantification of IgG Antibody Adsorbed at the Cellulose-Liquid Interface.

Raghuwanshi VS, Su J, Garvey CJ, Holt SA, Holden PJ, Batchelor WJ, Garnier G.

Biomacromolecules. 2017 Aug 14;18(8):2439-2445. doi: 10.1021/acs.biomac.7b00593. Epub 2017 Jul 12.


Agglomeration Determines Effects of Carbonaceous Nanomaterials on Soybean Nodulation, Dinitrogen Fixation Potential, and Growth in Soil.

Wang Y, Chang CH, Ji Z, Bouchard DC, Nisbet RM, Schimel JP, Gardea-Torresdey JL, Holden PA.

ACS Nano. 2017 Jun 27;11(6):5753-5765. doi: 10.1021/acsnano.7b01337. Epub 2017 Jun 15.


Pharmacodynamics of dose-escalated 'front-loading' polymyxin B regimens against polymyxin-resistant mcr-1-harbouring Escherichia coli.

Smith NM, Bulman ZP, Sieron AO, Bulitta JB, Holden PN, Nation RL, Li J, Wright GD, Tsuji BT.

J Antimicrob Chemother. 2017 Aug 1;72(8):2297-2303. doi: 10.1093/jac/dkx121.


Effect of freshwater sediment characteristics on the persistence of fecal indicator bacteria and genetic markers within a Southern California watershed.

Zimmer-Faust AG, Thulsiraj V, Marambio-Jones C, Cao Y, Griffith JF, Holden PA, Jay JA.

Water Res. 2017 Aug 1;119:1-11. doi: 10.1016/j.watres.2017.04.028. Epub 2017 Apr 18.


Host-Symbiont Interaction Model Explains Non-monotonic Response of Soybean Growth and Seed Production to Nano-CeO2 Exposure.

Klanjšček T, Muller EB, Holden PA, Nisbet RM.

Environ Sci Technol. 2017 May 2;51(9):4944-4950. doi: 10.1021/acs.est.6b06618. Epub 2017 Apr 12.


New Polymyxin B Dosing Strategies To Fortify Old Allies in the War against KPC-2-Producing Klebsiella pneumoniae.

Bulman ZP, Satlin MJ, Chen L, Kreiswirth BN, Shin BS, Walsh TJ, Holden PN, Forrest A, Nation RL, Li J, Tsuji BT.

Antimicrob Agents Chemother. 2017 Mar 24;61(4). pii: e02023-16. doi: 10.1128/AAC.02023-16. Print 2017 Apr.


DEB modeling for nanotoxicology, microbial ecology, and environmental engineering: Comment on: "Physics of metabolic organization" by Marko Jusup et al.

Holden PA.

Phys Life Rev. 2017 Mar;20:49-51. doi: 10.1016/j.plrev.2017.01.013. Epub 2017 Jan 12. No abstract available.


Influence of rhlR and lasR on Polymyxin Pharmacodynamics in Pseudomonas aeruginosa and Implications for Quorum Sensing Inhibition with Azithromycin.

Bulman ZP, Ly NS, Lenhard JR, Holden PN, Bulitta JB, Tsuji BT.

Antimicrob Agents Chemother. 2017 Mar 24;61(4). pii: e00096-16. doi: 10.1128/AAC.00096-16. Print 2017 Apr.


Spatial Models of Sewer Pipe Leakage Predict the Occurrence of Wastewater Indicators in Shallow Urban Groundwater.

Roehrdanz PR, Feraud M, Lee DG, Means JC, Snyder SA, Holden PA.

Environ Sci Technol. 2017 Feb 7;51(3):1213-1223. doi: 10.1021/acs.est.6b05015. Epub 2017 Jan 12.


Damage assessment for soybean cultivated in soil with either CeO2 or ZnO manufactured nanomaterials.

Priester JH, Moritz SC, Espinosa K, Ge Y, Wang Y, Nisbet RM, Schimel JP, Susana Goggi A, Gardea-Torresdey JL, Holden PA.

Sci Total Environ. 2017 Feb 1;579:1756-1768. doi: 10.1016/j.scitotenv.2016.11.149. Epub 2016 Dec 6.


In vitro pharmacodynamic evaluation of ceftolozane/tazobactam against β-lactamase-producing Escherichia coli in a hollow-fibre infection model.

Soon RL, Lenhard JR, Bulman ZP, Holden PN, Kelchlin P, Steenbergen JN, Friedrich LV, Forrest A, Tsuji BT.

Int J Antimicrob Agents. 2017 Jan;49(1):25-30. doi: 10.1016/j.ijantimicag.2016.07.015. Epub 2016 Sep 1.


Separation of Bacteria, Protozoa and Carbon Nanotubes by Density Gradient Centrifugation.

Mortimer M, Petersen EJ, Buchholz BA, Holden PA.

Nanomaterials (Basel). 2016;6(10). pii: 181. Epub 2016 Oct 12.


Microfiber Masses Recovered from Conventional Machine Washing of New or Aged Garments.

Hartline NL, Bruce NJ, Karba SN, Ruff EO, Sonar SU, Holden PA.

Environ Sci Technol. 2016 Nov 1;50(21):11532-11538. Epub 2016 Oct 13.


Smooth deuterated cellulose films for the visualisation of adsorbed bio-macromolecules.

Su J, Raghuwanshi VS, Raverty W, Garvey CJ, Holden PJ, Gillon M, Holt SA, Tabor R, Batchelor W, Garnier G.

Sci Rep. 2016 Oct 31;6:36119. doi: 10.1038/srep36119.


Exploring the evolutionary origins of overimitation: a comparison across domesticated and non-domesticated canids.

Johnston AM, Holden PC, Santos LR.

Dev Sci. 2017 Jul;20(4). doi: 10.1111/desc.12460. Epub 2016 Sep 22.


High-intensity meropenem combinations with polymyxin B: new strategies to overcome carbapenem resistance in Acinetobacter baumannii.

Lenhard JR, Bulitta JB, Connell TD, King-Lyons N, Landersdorfer CB, Cheah SE, Thamlikitkul V, Shin BS, Rao G, Holden PN, Walsh TJ, Forrest A, Nation RL, Li J, Tsuji BT.

J Antimicrob Chemother. 2017 Jan;72(1):153-165. Epub 2016 Sep 15.


Advancing Risk Analysis for Nanoscale Materials: Report from an International Workshop on the Role of Alternative Testing Strategies for Advancement.

Shatkin JA, Ong KJ, Beaudrie C, Clippinger AJ, Hendren CO, Haber LT, Hill M, Holden P, Kennedy AJ, Kim B, MacDonell M, Powers CM, Sharma M, Sheremeta L, Stone V, Sultan Y, Turley A, White RH.

Risk Anal. 2016 Aug;36(8):1520-37. doi: 10.1111/risa.12683. Epub 2016 Aug 11. Review.


Polymyxin B in combination with doripenem against heteroresistant Acinetobacter baumannii: pharmacodynamics of new dosing strategies.

Rao GG, Ly NS, Bulitta JB, Soon RL, San Roman MD, Holden PN, Landersdorfer CB, Nation RL, Li J, Forrest A, Tsuji BT.

J Antimicrob Chemother. 2016 Nov;71(11):3148-3156. Epub 2016 Aug 3.


Combinatorial pharmacodynamics of polymyxin B and tigecycline against heteroresistant Acinetobacter baumannii.

Rao GG, Ly NS, Diep J, Forrest A, Bulitta JB, Holden PN, Nation RL, Li J, Tsuji BT.

Int J Antimicrob Agents. 2016 Sep;48(3):331-6. doi: 10.1016/j.ijantimicag.2016.06.006. Epub 2016 Jul 12.


Bioaccumulation of Multiwall Carbon Nanotubes in Tetrahymena thermophila by Direct Feeding or Trophic Transfer.

Mortimer M, Petersen EJ, Buchholz BA, Orias E, Holden PA.

Environ Sci Technol. 2016 Aug 16;50(16):8876-85. doi: 10.1021/acs.est.6b01916. Epub 2016 Jul 26.


Reoxygenation enhances tumour necrosis factor alpha-induced degradation of the extracellular matrix produced by chondrogenic cells.

Markway BD, Cho H, Anderson DE, Holden P, Ravi V, Little CB, Johnstone B.

Eur Cell Mater. 2016 Jun 24;31:425-39.


Defining the Active Fraction of Daptomycin against Methicillin-Resistant Staphylococcus aureus (MRSA) Using a Pharmacokinetic and Pharmacodynamic Approach.

Garonzik SM, Lenhard JR, Forrest A, Holden PN, Bulitta JB, Tsuji BT.

PLoS One. 2016 Jun 10;11(6):e0156131. doi: 10.1371/journal.pone.0156131. eCollection 2016.


Quantitative analysis of deuterium using the isotopic effect on quaternary (13)C NMR chemical shifts.

Darwish TA, Yepuri NR, Holden PJ, James M.

Anal Chim Acta. 2016 Jul 13;927:89-98. doi: 10.1016/j.aca.2016.05.003. Epub 2016 May 4.


Novel compound heterozygous mutations in inositol polyphosphate phosphatase-like 1 in a family with severe opsismodysplasia.

Feist C, Holden P, Fitzgerald J.

Clin Dysmorphol. 2016 Oct;25(4):152-5. doi: 10.1097/MCD.0000000000000136.


A Socio-Ecological Approach for Identifying and Contextualising Spatial Ecosystem-Based Adaptation Priorities at the Sub-National Level.

Bourne A, Holness S, Holden P, Scorgie S, Donatti CI, Midgley G.

PLoS One. 2016 May 26;11(5):e0155235. doi: 10.1371/journal.pone.0155235. eCollection 2016.


Q&A with Peter Holden.

Holden P, Stempniak M.

Hosp Health Netw. 2016 Mar;90(3):25. No abstract available.


Considerations of Environmentally Relevant Test Conditions for Improved Evaluation of Ecological Hazards of Engineered Nanomaterials.

Holden PA, Gardea-Torresdey JL, Klaessig F, Turco RF, Mortimer M, Hund-Rinke K, Cohen Hubal EA, Avery D, Barceló D, Behra R, Cohen Y, Deydier-Stephan L, Ferguson PL, Fernandes TF, Herr Harthorn B, Henderson WM, Hoke RA, Hristozov D, Johnston JM, Kane AB, Kapustka L, Keller AA, Lenihan HS, Lovell W, Murphy CJ, Nisbet RM, Petersen EJ, Salinas ER, Scheringer M, Sharma M, Speed DE, Sultan Y, Westerhoff P, White JC, Wiesner MR, Wong EM, Xing B, Steele Horan M, Godwin HA, Nel AE.

Environ Sci Technol. 2016 Jun 21;50(12):6124-45. doi: 10.1021/acs.est.6b00608. Epub 2016 Jun 3.


Effect of Fluoroquinolones and Macrolides on Eradication and Resistance of Haemophilus influenzae in Chronic Obstructive Pulmonary Disease.

Pettigrew MM, Tsuji BT, Gent JF, Kong Y, Holden PN, Sethi S, Murphy TF.

Antimicrob Agents Chemother. 2016 Jun 20;60(7):4151-8. doi: 10.1128/AAC.00301-16. Print 2016 Jul.


Paradoxical Effect of Polymyxin B: High Drug Exposure Amplifies Resistance in Acinetobacter baumannii.

Tsuji BT, Landersdorfer CB, Lenhard JR, Cheah SE, Thamlikitkul V, Rao GG, Holden PN, Forrest A, Bulitta JB, Nation RL, Li J.

Antimicrob Agents Chemother. 2016 Jun 20;60(7):3913-20. doi: 10.1128/AAC.02831-15. Print 2016 Jul.


Long-Term Effects of Multiwalled Carbon Nanotubes and Graphene on Microbial Communities in Dry Soil.

Ge Y, Priester JH, Mortimer M, Chang CH, Ji Z, Schimel JP, Holden PA.

Environ Sci Technol. 2016 Apr 5;50(7):3965-74. doi: 10.1021/acs.est.5b05620. Epub 2016 Mar 24.


Optimization of Polymyxin B in Combination with Doripenem To Combat Mutator Pseudomonas aeruginosa.

Ly NS, Bulman ZP, Bulitta JB, Baron C, Rao GG, Holden PN, Li J, Sutton MD, Tsuji BT.

Antimicrob Agents Chemother. 2016 Apr 22;60(5):2870-80. doi: 10.1128/AAC.02377-15. Print 2016 May.

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