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Items: 1 to 50 of 52

1.

Structural basis of recognition and destabilization of the histone H2B ubiquitinated nucleosome by the DOT1L histone H3 Lys79 methyltransferase.

Jang S, Kang C, Yang HS, Jung T, Hebert H, Chung KY, Kim SJ, Hohng S, Song JJ.

Genes Dev. 2019 Jun 1;33(11-12):620-625. doi: 10.1101/gad.323790.118. Epub 2019 Mar 28.

PMID:
30923167
2.

Accelerated FRET-PAINT microscopy.

Lee J, Park S, Hohng S.

Mol Brain. 2018 Nov 22;11(1):70. doi: 10.1186/s13041-018-0414-3.

3.

ATP Binding to Rad5 Initiates Replication Fork Reversal by Inducing the Unwinding of the Leading Arm and the Formation of the Holliday Junction.

Shin S, Hyun K, Kim J, Hohng S.

Cell Rep. 2018 May 8;23(6):1831-1839. doi: 10.1016/j.celrep.2018.04.029.

4.

Multiple RPAs make WRN syndrome protein a superhelicase.

Lee M, Shin S, Uhm H, Hong H, Kirk J, Hyun K, Kulikowicz T, Kim J, Ahn B, Bohr VA, Hohng S.

Nucleic Acids Res. 2018 May 18;46(9):4689-4698. doi: 10.1093/nar/gky272.

5.

Superresolution fluorescence microscopy for 3D reconstruction of thick samples.

Park S, Kang W, Kwon YD, Shim J, Kim S, Kaang BK, Hohng S.

Mol Brain. 2018 Mar 15;11(1):17. doi: 10.1186/s13041-018-0361-z.

6.

Accelerated super-resolution imaging with FRET-PAINT.

Lee J, Park S, Kang W, Hohng S.

Mol Brain. 2017 Dec 28;10(1):63. doi: 10.1186/s13041-017-0344-5.

7.

Single-molecule FRET studies on the cotranscriptional folding of a thiamine pyrophosphate riboswitch.

Uhm H, Kang W, Ha KS, Kang C, Hohng S.

Proc Natl Acad Sci U S A. 2018 Jan 9;115(2):331-336. doi: 10.1073/pnas.1712983115. Epub 2017 Dec 26.

8.

Extended depth of field for single biomolecule optical imaging-force spectroscopy.

Chang M, Oh J, Kim Y, Hohng S, Lee JB.

Opt Express. 2017 Dec 11;25(25):32189-32197. doi: 10.1364/OE.25.032189.

PMID:
29245882
9.

Increased PKMζ activity impedes lateral movement of GluA2-containing AMPA receptors.

Yu NK, Uhm H, Shim J, Choi JH, Bae S, Sacktor TC, Hohng S, Kaang BK.

Mol Brain. 2017 Nov 29;10(1):56. doi: 10.1186/s13041-017-0334-7.

10.

NAP1L1 accelerates activation and decreases pausing to enhance nucleosome remodeling by CSB.

Lee JY, Lake RJ, Kirk J, Bohr VA, Fan HY, Hohng S.

Nucleic Acids Res. 2017 May 5;45(8):4696-4707. doi: 10.1093/nar/gkx188.

11.

AUF1 facilitates microRNA-mediated gene silencing.

Min KW, Jo MH, Shin S, Davila S, Zealy RW, Kang SI, Lloyd LT, Hohng S, Yoon JH.

Nucleic Acids Res. 2017 Jun 2;45(10):6064-6073. doi: 10.1093/nar/gkx149.

13.

Single-Molecule Multicolor FRET Assay for Studying Structural Dynamics of Biomolecules.

Lee S, Jang Y, Lee SJ, Hohng S.

Methods Enzymol. 2016;581:461-486. doi: 10.1016/bs.mie.2016.08.015. Epub 2016 Oct 7.

PMID:
27793289
14.

Active Control of Repetitive Structural Transitions between Replication Forks and Holliday Junctions by Werner Syndrome Helicase.

Shin S, Lee J, Yoo S, Kulikowicz T, Bohr VA, Ahn B, Hohng S.

Structure. 2016 Aug 2;24(8):1292-1300. doi: 10.1016/j.str.2016.06.004. Epub 2016 Jul 14.

15.

Structure of Human DROSHA.

Kwon SC, Nguyen TA, Choi YG, Jo MH, Hohng S, Kim VN, Woo JS.

Cell. 2016 Jan 14;164(1-2):81-90. doi: 10.1016/j.cell.2015.12.019. Epub 2015 Dec 31.

17.

AUF1 promotes let-7b loading on Argonaute 2.

Yoon JH, Jo MH, White EJ, De S, Hafner M, Zucconi BE, Abdelmohsen K, Martindale JL, Yang X, Wood WH 3rd, Shin YM, Song JJ, Tuschl T, Becker KG, Wilson GM, Hohng S, Gorospe M.

Genes Dev. 2015 Aug 1;29(15):1599-604. doi: 10.1101/gad.263749.115.

18.

Human Argonaute 2 Has Diverse Reaction Pathways on Target RNAs.

Jo MH, Shin S, Jung SR, Kim E, Song JJ, Hohng S.

Mol Cell. 2015 Jul 2;59(1):117-24. doi: 10.1016/j.molcel.2015.04.027.

19.

Functional Anatomy of the Human Microprocessor.

Nguyen TA, Jo MH, Choi YG, Park J, Kwon SC, Hohng S, Kim VN, Woo JS.

Cell. 2015 Jun 4;161(6):1374-87. doi: 10.1016/j.cell.2015.05.010. Epub 2015 May 28.

20.

Dicer nuclease-promoted production of Let7a-1 microRNA is enhanced in the presence of tryptophan-containing amphiphilic peptides.

Hyun S, Han A, Jo MH, Hohng S, Yu J.

Chembiochem. 2014 Jul 21;15(11):1651-9. doi: 10.1002/cbic.201402126. Epub 2014 Jul 2.

PMID:
24990414
21.

Protein conformational dynamics dictate the binding affinity for a ligand.

Seo MH, Park J, Kim E, Hohng S, Kim HS.

Nat Commun. 2014 Apr 24;5:3724. doi: 10.1038/ncomms4724.

PMID:
24758940
22.

Distinct Z-DNA binding mode of a PKR-like protein kinase containing a Z-DNA binding domain (PKZ).

Kim D, Hur J, Park K, Bae S, Shin D, Ha SC, Hwang HY, Hohng S, Lee JH, Lee S, Kim YG, Kim KK.

Nucleic Acids Res. 2014 May;42(9):5937-48. doi: 10.1093/nar/gku189. Epub 2014 Mar 20.

23.

An optical trap combined with three-color FRET.

Lee S, Hohng S.

J Am Chem Soc. 2013 Dec 11;135(49):18260-3. doi: 10.1021/ja408767p. Epub 2013 Nov 26.

PMID:
24256200
24.

Dynamic anchoring of the 3'-end of the guide strand controls the target dissociation of Argonaute-guide complex.

Jung SR, Kim E, Hwang W, Shin S, Song JJ, Hohng S.

J Am Chem Soc. 2013 Nov 13;135(45):16865-71. doi: 10.1021/ja403138d. Epub 2013 Oct 31.

PMID:
24175926
25.

Energetics of Z-DNA binding protein-mediated helicity reversals in DNA, RNA, and DNA-RNA duplexes.

Bae S, Kim Y, Kim D, Kim KK, Kim YG, Hohng S.

J Phys Chem B. 2013 Nov 7;117(44):13866-71. doi: 10.1021/jp409862j. Epub 2013 Oct 28.

PMID:
24111542
26.

Sub-diffraction limit imaging of inorganic nanowire networks interfacing cells.

Park J, Lee J, Namgung S, Heo K, Lee H, Hohng S, Hong S.

Small. 2014 Feb 12;10(3):462-8. doi: 10.1002/smll.201301214. Epub 2013 Sep 3. No abstract available.

PMID:
24000240
27.

Structure-based elucidation of the regulatory mechanism for aminopeptidase activity.

Ta HM, Bae S, Han S, Song J, Ahn TK, Hohng S, Lee S, Kim KK.

Acta Crystallogr D Biol Crystallogr. 2013 Sep;69(Pt 9):1738-47. doi: 10.1107/S0907444913012651. Epub 2013 Aug 15.

PMID:
23999297
28.

Z-DNA stabilization is dominated by the Hofmeister effect.

Bae S, Son H, Kim YG, Hohng S.

Phys Chem Chem Phys. 2013 Oct 14;15(38):15829-32. doi: 10.1039/c3cp52047a. Epub 2013 Aug 30.

PMID:
23995025
29.

Maximizing information content of single-molecule FRET experiments: multi-color FRET and FRET combined with force or torque.

Hohng S, Lee S, Lee J, Jo MH.

Chem Soc Rev. 2014 Feb 21;43(4):1007-13. doi: 10.1039/c3cs60184f. Review.

PMID:
23970315
30.

A single-molecule dissection of ligand binding to a protein with intrinsic dynamics.

Kim E, Lee S, Jeon A, Choi JM, Lee HS, Hohng S, Kim HS.

Nat Chem Biol. 2013 May;9(5):313-8. doi: 10.1038/nchembio.1213. Epub 2013 Mar 17.

PMID:
23502425
31.

Autofocusing system based on optical astigmatism analysis of single-molecule images.

Hwang W, Bae S, Hohng S.

Opt Express. 2012 Dec 31;20(28):29353-60. doi: 10.1364/OE.20.029353.

PMID:
23388762
32.

Kinetic mechanism for viral dsRNA length discrimination by MDA5 filaments.

Peisley A, Jo MH, Lin C, Wu B, Orme-Johnson M, Walz T, Hohng S, Hur S.

Proc Natl Acad Sci U S A. 2012 Dec 4;109(49):E3340-9. doi: 10.1073/pnas.1208618109. Epub 2012 Nov 5.

33.

Hidden complexity in the isomerization dynamics of Holliday junctions.

Hyeon C, Lee J, Yoon J, Hohng S, Thirumalai D.

Nat Chem. 2012 Nov;4(11):907-14. doi: 10.1038/nchem.1463. Epub 2012 Oct 7.

PMID:
23089865
34.

Video-rate confocal microscopy for single-molecule imaging in live cells and superresolution fluorescence imaging.

Lee J, Miyanaga Y, Ueda M, Hohng S.

Biophys J. 2012 Oct 17;103(8):1691-7. doi: 10.1016/j.bpj.2012.09.014. Epub 2012 Oct 16.

35.

DNA cleavage and opening reactions of human topoisomerase IIα are regulated via Mg2+-mediated dynamic bending of gate-DNA.

Lee S, Jung SR, Heo K, Byl JA, Deweese JE, Osheroff N, Hohng S.

Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2925-30. doi: 10.1073/pnas.1115704109. Epub 2012 Feb 9.

36.

Single-molecule approach to immunoprecipitated protein complexes: insights into miRNA uridylation.

Yeom KH, Heo I, Lee J, Hohng S, Kim VN, Joo C.

EMBO Rep. 2011 Jul 1;12(7):690-6. doi: 10.1038/embor.2011.100.

37.

Dynamic competition of DsrA and rpoS fragments for the proximal binding site of Hfq as a means for efficient annealing.

Hwang W, Arluison V, Hohng S.

Nucleic Acids Res. 2011 Jul;39(12):5131-9. doi: 10.1093/nar/gkr075. Epub 2011 Feb 27.

38.

Intrinsic Z-DNA is stabilized by the conformational selection mechanism of Z-DNA-binding proteins.

Bae S, Kim D, Kim KK, Kim YG, Hohng S.

J Am Chem Soc. 2011 Feb 2;133(4):668-71. doi: 10.1021/ja107498y.

PMID:
21171590
39.

Single-molecule four-color FRET.

Lee J, Lee S, Ragunathan K, Joo C, Ha T, Hohng S.

Angew Chem Int Ed Engl. 2010 Dec 17;49(51):9922-5. doi: 10.1002/anie.201005402. No abstract available.

40.

Single-molecule three-color FRET with both negligible spectral overlap and long observation time.

Lee S, Lee J, Hohng S.

PLoS One. 2010 Aug 19;5(8):e12270. doi: 10.1371/journal.pone.0012270.

41.

A practical guide to single-molecule FRET.

Roy R, Hohng S, Ha T.

Nat Methods. 2008 Jun;5(6):507-16. doi: 10.1038/nmeth.1208. Review.

42.

Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction.

Hohng S, Zhou R, Nahas MK, Yu J, Schulten K, Lilley DM, Ha T.

Science. 2007 Oct 12;318(5848):279-83.

43.

Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA.

Arluison V, Hohng S, Roy R, Pellegrini O, Régnier P, Ha T.

Nucleic Acids Res. 2007;35(3):999-1006. Epub 2007 Jan 26.

44.

Single-molecule quantum-dot fluorescence resonance energy transfer.

Hohng S, Ha T.

Chemphyschem. 2005 May;6(5):956-60.

PMID:
15884082
45.

Observation of internal cleavage and ligation reactions of a ribozyme.

Nahas MK, Wilson TJ, Hohng S, Jarvie K, Lilley DM, Ha T.

Nat Struct Mol Biol. 2004 Nov;11(11):1107-13. Epub 2004 Oct 10. Erratum in: Nat Struct Mol Biol. 2004 Dec;11(12):1253.

PMID:
15475966
46.

Single-molecule three-color FRET.

Hohng S, Joo C, Ha T.

Biophys J. 2004 Aug;87(2):1328-37.

47.

Diffraction-based solid immersion lens.

Brunner R, Burkhardt M, Pesch A, Sandfuchs O, Ferstl M, Hohng S, White JO.

J Opt Soc Am A Opt Image Sci Vis. 2004 Jul;21(7):1186-91.

PMID:
15260250
48.

Near-complete suppression of quantum dot blinking in ambient conditions.

Hohng S, Ha T.

J Am Chem Soc. 2004 Feb 11;126(5):1324-5.

PMID:
14759174
49.

Conformational flexibility of four-way junctions in RNA.

Hohng S, Wilson TJ, Tan E, Clegg RM, Lilley DM, Ha T.

J Mol Biol. 2004 Feb 6;336(1):69-79.

PMID:
14741204
50.

Microscopic origin of surface-plasmon radiation in plasmonic band-gap nanostructures.

Kim DS, Hohng SC, Malyarchuk V, Yoon YC, Ahn YH, Yee KJ, Park JW, Kim J, Park QH, Lienau C.

Phys Rev Lett. 2003 Oct 3;91(14):143901. Epub 2003 Sep 30.

PMID:
14611523

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