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Items: 1 to 50 of 87

1.

Structure and redox properties of the diheme electron carrier cytochrome c4 from Pseudomonas aeruginosa.

Carpenter JM, Zhong F, Ragusa MJ, Louro RO, Hogan DA, Pletneva EV.

J Inorg Biochem. 2019 Oct 22;203:110889. doi: 10.1016/j.jinorgbio.2019.110889. [Epub ahead of print]

PMID:
31707335
2.

New Mitochondrial Targets in Fungal Pathogens.

Murante D, Hogan DA.

MBio. 2019 Oct 1;10(5). pii: e02258-19. doi: 10.1128/mBio.02258-19.

3.

Pseudomonas aeruginosa Ethanol Oxidation by AdhA in Low-Oxygen Environments.

Crocker AW, Harty CE, Hammond JH, Willger SD, Salazar P, Botelho NJ, Jacobs NJ, Hogan DA.

J Bacteriol. 2019 Nov 5;201(23). pii: e00393-19. doi: 10.1128/JB.00393-19. Print 2019 Dec 1.

PMID:
31527114
4.

Regulation of Pseudomonas aeruginosa-Mediated Neutrophil Extracellular Traps.

Skopelja-Gardner S, Theprungsirikul J, Lewis KA, Hammond JH, Carlson KM, Hazlett HF, Nymon A, Nguyen D, Berwin BL, Hogan DA, Rigby WFC.

Front Immunol. 2019 Jul 18;10:1670. doi: 10.3389/fimmu.2019.01670. eCollection 2019.

5.

Ethanol Decreases Pseudomonas aeruginosa Flagellar Motility through the Regulation of Flagellar Stators.

Lewis KA, Baker AE, Chen AI, Harty CE, Kuchma SL, O'Toole GA, Hogan DA.

J Bacteriol. 2019 Aug 22;201(18). pii: e00285-19. doi: 10.1128/JB.00285-19. Print 2019 Sep 15.

PMID:
31109994
6.

Ethanol Stimulates Trehalose Production through a SpoT-DksA-AlgU-Dependent Pathway in Pseudomonas aeruginosa.

Harty CE, Martins D, Doing G, Mould DL, Clay ME, Occhipinti P, Nguyen D, Hogan DA.

J Bacteriol. 2019 May 22;201(12). pii: e00794-18. doi: 10.1128/JB.00794-18. Print 2019 Jun 15.

PMID:
30936375
7.

Tobramycin reduces key virulence determinants in the proteome of Pseudomonas aeruginosa outer membrane vesicles.

Koeppen K, Barnaby R, Jackson AA, Gerber SA, Hogan DA, Stanton BA.

PLoS One. 2019 Jan 25;14(1):e0211290. doi: 10.1371/journal.pone.0211290. eCollection 2019.

8.

Genetic Analysis of NDT80 Family Transcription Factors in Candida albicans Using New CRISPR-Cas9 Approaches.

Min K, Biermann A, Hogan DA, Konopka JB.

mSphere. 2018 Nov 21;3(6). pii: e00545-18. doi: 10.1128/mSphere.00545-18.

9.

Evolution of drug resistance in an antifungal-naive chronic Candida lusitaniae infection.

Demers EG, Biermann AR, Masonjones S, Crocker AW, Ashare A, Stajich JE, Hogan DA.

Proc Natl Acad Sci U S A. 2018 Nov 20;115(47):12040-12045. doi: 10.1073/pnas.1807698115. Epub 2018 Nov 2.

10.

Work-Related Upper Limb Symptoms in Hand-Intensive Health Care Occupations: A Cross-Sectional Study With a Health and Safety Perspective.

Greiner BA, Nolan S, Hogan DAM.

Phys Ther. 2019 Jan 1;99(1):62-73. doi: 10.1093/ptj/pzy124.

PMID:
30329118
11.

Refining the Application of Microbial Lipids as Tracers of Staphylococcus aureus Growth Rates in Cystic Fibrosis Sputum.

Neubauer C, Kasi AS, Grahl N, Sessions AL, Kopf SH, Kato R, Hogan DA, Newman DK.

J Bacteriol. 2018 Nov 26;200(24). pii: e00365-18. doi: 10.1128/JB.00365-18. Print 2018 Dec 15.

12.

Profiling of Bacterial and Fungal Microbial Communities in Cystic Fibrosis Sputum Using RNA.

Grahl N, Dolben EL, Filkins LM, Crocker AW, Willger SD, Morrison HG, Sogin ML, Ashare A, Gifford AH, Jacobs NJ, Schwartzman JD, Hogan DA.

mSphere. 2018 Aug 8;3(4). pii: e00292-18. doi: 10.1128/mSphere.00292-18.

13.

PathCORE-T: identifying and visualizing globally co-occurring pathways in large transcriptomic compendia.

Chen KM, Tan J, Way GP, Doing G, Hogan DA, Greene CS.

BioData Min. 2018 Jul 3;11:14. doi: 10.1186/s13040-018-0175-7. eCollection 2018.

14.

Role of quorum sensing and chemical communication in fungal biotechnology and pathogenesis.

Barriuso J, Hogan DA, Keshavarz T, Martínez MJ.

FEMS Microbiol Rev. 2018 Sep 1;42(5):627-638. doi: 10.1093/femsre/fuy022.

15.

Pearls collections: What we can learn about infectious disease and cancer.

Knoll LJ, Hogan DA, Leong JM, Heitman J, Condit RC.

PLoS Pathog. 2018 Mar 29;14(3):e1006915. doi: 10.1371/journal.ppat.1006915. eCollection 2018 Mar. No abstract available.

16.

A Multimodal Strategy Used by a Large c-di-GMP Network.

Dahlstrom KM, Collins AJ, Doing G, Taroni JN, Gauvin TJ, Greene CS, Hogan DA, O'Toole GA.

J Bacteriol. 2018 Mar 26;200(8). pii: e00703-17. doi: 10.1128/JB.00703-17. Print 2018 Apr 15.

17.

ADAGE signature analysis: differential expression analysis with data-defined gene sets.

Tan J, Huyck M, Hu D, Zelaya RA, Hogan DA, Greene CS.

BMC Bioinformatics. 2017 Nov 22;18(1):512. doi: 10.1186/s12859-017-1905-4.

18.

An epoxide hydrolase secreted by Pseudomonas aeruginosa decreases mucociliary transport and hinders bacterial clearance from the lung.

Hvorecny KL, Dolben E, Moreau-Marquis S, Hampton TH, Shabaneh TB, Flitter BA, Bahl CD, Bomberger JM, Levy BD, Stanton BA, Hogan DA, Madden DR.

Am J Physiol Lung Cell Mol Physiol. 2018 Jan 1;314(1):L150-L156. doi: 10.1152/ajplung.00383.2017. Epub 2017 Oct 5.

19.

Candida albicans and Pseudomonas aeruginosa Interact To Enhance Virulence of Mucosal Infection in Transparent Zebrafish.

Bergeron AC, Seman BG, Hammond JH, Archambault LS, Hogan DA, Wheeler RT.

Infect Immun. 2017 Oct 18;85(11). pii: e00475-17. doi: 10.1128/IAI.00475-17. Print 2017 Nov.

20.

Unsupervised Extraction of Stable Expression Signatures from Public Compendia with an Ensemble of Neural Networks.

Tan J, Doing G, Lewis KA, Price CE, Chen KM, Cady KC, Perchuk B, Laub MT, Hogan DA, Greene CS.

Cell Syst. 2017 Jul 26;5(1):63-71.e6. doi: 10.1016/j.cels.2017.06.003. Epub 2017 Jul 12.

21.

Use of RNA-Protein Complexes for Genome Editing in Non-albicans Candida Species.

Grahl N, Demers EG, Crocker AW, Hogan DA.

mSphere. 2017 Jun 21;2(3). pii: e00218-17. doi: 10.1128/mSphere.00218-17. eCollection 2017 May-Jun.

22.

Pseudomonas aeruginosa Alginate Overproduction Promotes Coexistence with Staphylococcus aureus in a Model of Cystic Fibrosis Respiratory Infection.

Limoli DH, Whitfield GB, Kitao T, Ivey ML, Davis MR Jr, Grahl N, Hogan DA, Rahme LG, Howell PL, O'Toole GA, Goldberg JB.

MBio. 2017 Mar 21;8(2). pii: e00186-17. doi: 10.1128/mBio.00186-17.

23.

Global Role of Cyclic AMP Signaling in pH-Dependent Responses in Candida albicans.

Hollomon JM, Grahl N, Willger SD, Koeppen K, Hogan DA.

mSphere. 2016 Nov 30;1(6). pii: e00283-16. eCollection 2016 Nov-Dec.

24.
25.

Signaling through Lrg1, Rho1 and Pkc1 Governs Candida albicans Morphogenesis in Response to Diverse Cues.

Xie JL, Grahl N, Sless T, Leach MD, Kim SH, Hogan DA, Robbins N, Cowen LE.

PLoS Genet. 2016 Oct 27;12(10):e1006405. doi: 10.1371/journal.pgen.1006405. eCollection 2016 Oct.

26.

Environmentally Endemic Pseudomonas aeruginosa Strains with Mutations in lasR Are Associated with Increased Disease Severity in Corneal Ulcers.

Hammond JH, Hebert WP, Naimie A, Ray K, Van Gelder RD, DiGiandomenico A, Lalitha P, Srinivasan M, Acharya NR, Lietman T, Hogan DA, Zegans ME.

mSphere. 2016 Sep 7;1(5). pii: e00140-16. doi: 10.1128/mSphere.00140-16. eCollection 2016 Sep-Oct.

27.

Use of a Multiplex Transcript Method for Analysis of Pseudomonas aeruginosa Gene Expression Profiles in the Cystic Fibrosis Lung.

Gifford AH, Willger SD, Dolben EL, Moulton LA, Dorman DB, Bean H, Hill JE, Hampton TH, Ashare A, Hogan DA.

Infect Immun. 2016 Sep 19;84(10):2995-3006. doi: 10.1128/IAI.00437-16. Print 2016 Oct.

28.

A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles.

Koeppen K, Hampton TH, Jarek M, Scharfe M, Gerber SA, Mielcarz DW, Demers EG, Dolben EL, Hammond JH, Hogan DA, Stanton BA.

PLoS Pathog. 2016 Jun 13;12(6):e1005672. doi: 10.1371/journal.ppat.1005672. eCollection 2016 Jun.

29.

The Pseudomonas aeruginosa efflux pump MexGHI-OpmD transports a natural phenazine that controls gene expression and biofilm development.

Sakhtah H, Koyama L, Zhang Y, Morales DK, Fields BL, Price-Whelan A, Hogan DA, Shepard K, Dietrich LE.

Proc Natl Acad Sci U S A. 2016 Jun 21;113(25):E3538-47. doi: 10.1073/pnas.1600424113. Epub 2016 Jun 6.

30.

Are Irish therapists at heightened risk for low back pain?

Hogan DA, O'Sullivan LW, Nolan S, Greiner BA.

Occup Med (Lond). 2016 Jul;66(5):351-7. doi: 10.1093/occmed/kqw020. Epub 2016 Mar 11.

31.

Analysis of Lung Microbiota in Bronchoalveolar Lavage, Protected Brush and Sputum Samples from Subjects with Mild-To-Moderate Cystic Fibrosis Lung Disease.

Hogan DA, Willger SD, Dolben EL, Hampton TH, Stanton BA, Morrison HG, Sogin ML, Czum J, Ashare A.

PLoS One. 2016 Mar 4;11(3):e0149998. doi: 10.1371/journal.pone.0149998. eCollection 2016.

32.

COMPUTATIONAL APPROACHES TO STUDY MICROBES AND MICROBIOMES.

Greene CS, Foster JA, Stanton BA, Hogan DA, Bromberg Y.

Pac Symp Biocomput. 2016;21:557-67.

33.

Mitochondrial Activity and Cyr1 Are Key Regulators of Ras1 Activation of C. albicans Virulence Pathways.

Grahl N, Demers EG, Lindsay AK, Harty CE, Willger SD, Piispanen AE, Hogan DA.

PLoS Pathog. 2015 Aug 28;11(8):e1005133. doi: 10.1371/journal.ppat.1005133. eCollection 2015 Aug.

34.

Editorial overview: host-microbe interactions: fungi: heterogeneity in fungal cells, populations, and communities.

Hogan DA, Gladfelter AS.

Curr Opin Microbiol. 2015 Aug;26:vii-ix. doi: 10.1016/j.mib.2015.07.003. Epub 2015 Jul 20. No abstract available.

35.

A self-lysis pathway that enhances the virulence of a pathogenic bacterium.

McFarland KA, Dolben EL, LeRoux M, Kambara TK, Ramsey KM, Kirkpatrick RL, Mougous JD, Hogan DA, Dove SL.

Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):8433-8. doi: 10.1073/pnas.1506299112. Epub 2015 Jun 22.

36.

Links between Anr and Quorum Sensing in Pseudomonas aeruginosa Biofilms.

Hammond JH, Dolben EF, Smith TJ, Bhuju S, Hogan DA.

J Bacteriol. 2015 Sep;197(17):2810-20. doi: 10.1128/JB.00182-15. Epub 2015 Jun 15.

37.

Analysis of the Candida albicans Phosphoproteome.

Willger SD, Liu Z, Olarte RA, Adamo ME, Stajich JE, Myers LC, Kettenbach AN, Hogan DA.

Eukaryot Cell. 2015 May;14(5):474-85. doi: 10.1128/EC.00011-15. Epub 2015 Mar 6.

38.

Characterization and quantification of the fungal microbiome in serial samples from individuals with cystic fibrosis.

Willger SD, Grim SL, Dolben EL, Shipunova A, Hampton TH, Morrison HG, Filkins LM, O'Toole GA, Moulton LA, Ashare A, Sogin ML, Hogan DA.

Microbiome. 2014 Nov 3;2:40. doi: 10.1186/2049-2618-2-40. eCollection 2014.

39.

Candida albicans ethanol stimulates Pseudomonas aeruginosa WspR-controlled biofilm formation as part of a cyclic relationship involving phenazines.

Chen AI, Dolben EF, Okegbe C, Harty CE, Golub Y, Thao S, Ha DG, Willger SD, O'Toole GA, Harwood CS, Dietrich LE, Hogan DA.

PLoS Pathog. 2014 Oct 23;10(10):e1004480. doi: 10.1371/journal.ppat.1004480. eCollection 2014 Oct.

40.

Analysis of Candida albicans mutants defective in the Cdk8 module of mediator reveal links between metabolism and biofilm formation.

Lindsay AK, Morales DK, Liu Z, Grahl N, Zhang A, Willger SD, Myers LC, Hogan DA.

PLoS Genet. 2014 Oct 2;10(10):e1004567. doi: 10.1371/journal.pgen.1004567. eCollection 2014 Oct.

41.

Acidosis potentiates the host proinflammatory interleukin-1β response to Pseudomonas aeruginosa infection.

Torres IM, Patankar YR, Shabaneh TB, Dolben E, Hogan DA, Leib DA, Berwin BL.

Infect Immun. 2014 Nov;82(11):4689-97. doi: 10.1128/IAI.02024-14. Epub 2014 Aug 25.

42.

Global regulator Anr represses PlcH phospholipase activity in Pseudomonas aeruginosa when oxygen is limiting.

Jackson AA, Daniels EF, Hammond JH, Willger SD, Hogan DA.

Microbiology. 2014 Oct;160(Pt 10):2215-25. doi: 10.1099/mic.0.081158-0. Epub 2014 Jul 29.

43.

Unique microbial communities persist in individual cystic fibrosis patients throughout a clinical exacerbation.

Price KE, Hampton TH, Gifford AH, Dolben EL, Hogan DA, Morrison HG, Sogin ML, O'Toole GA.

Microbiome. 2013 Nov 1;1(1):27. doi: 10.1186/2049-2618-1-27.

44.

The effect of manual handling training on achieving training transfer, employee's behaviour change and subsequent reduction of work-related musculoskeletal disorders: a systematic review.

Hogan DA, Greiner BA, O'Sullivan L.

Ergonomics. 2014;57(1):93-107. doi: 10.1080/00140139.2013.862307. Epub 2014 Jan 6. Review.

PMID:
24387742
45.

Gene expression studies for the analysis of domoic acid production in the marine diatom Pseudo-nitzschia multiseries.

Boissonneault KR, Henningsen BM, Bates SS, Robertson DL, Milton S, Pelletier J, Hogan DA, Housman DE.

BMC Mol Biol. 2013 Nov 1;14:25. doi: 10.1186/1471-2199-14-25.

46.

Regulated proteolysis of Candida albicans Ras1 is involved in morphogenesis and quorum sensing regulation.

Piispanen AE, Grahl N, Hollomon JM, Hogan DA.

Mol Microbiol. 2013 Jul;89(1):166-78. doi: 10.1111/mmi.12268. Epub 2013 Jun 10.

47.

Bacterial type 6 secreted phospholipases play family feud.

Hogan DA, Hammond JH.

Cell Host Microbe. 2013 May 15;13(5):507-508. doi: 10.1016/j.chom.2013.05.002.

48.

Anr and its activation by PlcH activity in Pseudomonas aeruginosa host colonization and virulence.

Jackson AA, Gross MJ, Daniels EF, Hampton TH, Hammond JH, Vallet-Gely I, Dove SL, Stanton BA, Hogan DA.

J Bacteriol. 2013 Jul;195(13):3093-104. doi: 10.1128/JB.02169-12. Epub 2013 May 10.

49.

Control of Candida albicans metabolism and biofilm formation by Pseudomonas aeruginosa phenazines.

Morales DK, Grahl N, Okegbe C, Dietrich LE, Jacobs NJ, Hogan DA.

MBio. 2013 Jan 29;4(1):e00526-12. doi: 10.1128/mBio.00526-12.

50.

Farnesol and cyclic AMP signaling effects on the hypha-to-yeast transition in Candida albicans.

Lindsay AK, Deveau A, Piispanen AE, Hogan DA.

Eukaryot Cell. 2012 Oct;11(10):1219-25. doi: 10.1128/EC.00144-12. Epub 2012 Aug 10.

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