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IL-1 and TNF╬▒ Contribute to the Inflammatory Niche to Enhance Alveolar Regeneration.

Katsura H, Kobayashi Y, Tata PR, Hogan BLM.

Stem Cell Reports. 2019 Apr 9;12(4):657-666. doi: 10.1016/j.stemcr.2019.02.013. Epub 2019 Mar 28.


The endoderm from a diverse perspective.

Dunn NR, Hogan BLM.

Development. 2018 Aug 16;145(17). pii: dev163550. doi: 10.1242/dev.163550. Review.


Ager-CreERT2: A New Genetic Tool for Studying Lung Alveolar Development, Homeostasis, and Repair.

Chung MI, Hogan BLM.

Am J Respir Cell Mol Biol. 2018 Dec;59(6):706-712. doi: 10.1165/rcmb.2018-0125OC.


Niche-mediated BMP/SMAD signaling regulates lung alveolar stem cell proliferation and differentiation.

Chung MI, Bujnis M, Barkauskas CE, Kobayashi Y, Hogan BLM.

Development. 2018 May 11;145(9). pii: dev163014. doi: 10.1242/dev.163014.


Integrating Mechanical Force into Lung Development.

Hogan BLM.

Dev Cell. 2018 Feb 5;44(3):273-275. doi: 10.1016/j.devcel.2018.01.015. Epub 2018 Feb 5.


Lung organoids: current uses and future promise.

Barkauskas CE, Chung MI, Fioret B, Gao X, Katsura H, Hogan BL.

Development. 2017 Mar 15;144(6):986-997. doi: 10.1242/dev.140103. Review.


BMP signaling and cellular dynamics during regeneration of airway epithelium from basal progenitors.

Tadokoro T, Gao X, Hong CC, Hotten D, Hogan BL.

Development. 2016 Mar 1;143(5):764-73. doi: 10.1242/dev.126656. Epub 2016 Jan 25.


GRHL2 coordinates regeneration of a polarized mucociliary epithelium from basal stem cells.

Gao X, Bali AS, Randell SH, Hogan BL.

J Cell Biol. 2015 Nov 9;211(3):669-82. doi: 10.1083/jcb.201506014. Epub 2015 Nov 2.


Plasticity of Hopx(+) type I alveolar cells to regenerate type II cells in the lung.

Jain R, Barkauskas CE, Takeda N, Bowie EJ, Aghajanian H, Wang Q, Padmanabhan A, Manderfield LJ, Gupta M, Li D, Li L, Trivedi CM, Hogan BLM, Epstein JA.

Nat Commun. 2015 Apr 13;6:6727. doi: 10.1038/ncomms7727.


Telomere dysfunction causes alveolar stem cell failure.

Alder JK, Barkauskas CE, Limjunyawong N, Stanley SE, Kembou F, Tuder RM, Hogan BL, Mitzner W, Armanios M.

Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):5099-104. doi: 10.1073/pnas.1504780112. Epub 2015 Apr 3.


The cell of origin and subtype of K-Ras-induced lung tumors are modified by Notch and Sox2.

Xu X, Huang L, Futtner C, Schwab B, Rampersad RR, Lu Y, Sporn TA, Hogan BL, Onaitis MW.

Genes Dev. 2014 Sep 1;28(17):1929-39. doi: 10.1101/gad.243717.114.


IL-6/STAT3 promotes regeneration of airway ciliated cells from basal stem cells.

Tadokoro T, Wang Y, Barak LS, Bai Y, Randell SH, Hogan BL.

Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):E3641-9. doi: 10.1073/pnas.1409781111. Epub 2014 Aug 18.


Repair and regeneration of the respiratory system: complexity, plasticity, and mechanisms of lung stem cell function.

Hogan BL, Barkauskas CE, Chapman HA, Epstein JA, Jain R, Hsia CC, Niklason L, Calle E, Le A, Randell SH, Rock J, Snitow M, Krummel M, Stripp BR, Vu T, White ES, Whitsett JA, Morrisey EE.

Cell Stem Cell. 2014 Aug 7;15(2):123-38. doi: 10.1016/j.stem.2014.07.012. Review.


Age-related changes in the cellular composition and epithelial organization of the mouse trachea.

Wansleeben C, Bowie E, Hotten DF, Yu YR, Hogan BL.

PLoS One. 2014 Mar 27;9(3):e93496. doi: 10.1371/journal.pone.0093496. eCollection 2014.


Type 2 alveolar cells are stem cells in adult lung.

Barkauskas CE, Cronce MJ, Rackley CR, Bowie EJ, Keene DR, Stripp BR, Randell SH, Noble PW, Hogan BL.

J Clin Invest. 2013 Jul;123(7):3025-36. doi: 10.1172/JCI68782. Epub 2013 Jun 10.


Stem cells of the adult lung: their development and role in homeostasis, regeneration, and disease.

Wansleeben C, Barkauskas CE, Rock JR, Hogan BL.

Wiley Interdiscip Rev Dev Biol. 2013 Jan-Feb;2(1):131-48. doi: 10.1002/wdev.58. Epub 2012 May 3. Review. Erratum in: Wiley Interdiscip Rev Dev Biol. 2015 May-Jun;4(3):311-2.


Loss of basal cells precedes bronchiolitis obliterans-like pathological changes in a murine model of chlorine gas inhalation.

O'Koren EG, Hogan BL, Gunn MD.

Am J Respir Cell Mol Biol. 2013 Nov;49(5):788-97. doi: 10.1165/rcmb.2012-0369OC.


Evidence for multiple roles for grainyhead-like 2 in the establishment and maintenance of human mucociliary airway epithelium.[corrected].

Gao X, Vockley CM, Pauli F, Newberry KM, Xue Y, Randell SH, Reddy TE, Hogan BL.

Proc Natl Acad Sci U S A. 2013 Jun 4;110(23):9356-61. doi: 10.1073/pnas.1307589110. Epub 2013 May 20. Erratum in: Proc Natl Acad Sci U S A. 2014 Dec 9;111(49):17684.


Calcium-activated chloride channel TMEM16A modulates mucin secretion and airway smooth muscle contraction.

Huang F, Zhang H, Wu M, Yang H, Kudo M, Peters CJ, Woodruff PG, Solberg OD, Donne ML, Huang X, Sheppard D, Fahy JV, Wolters PJ, Hogan BL, Finkbeiner WE, Li M, Jan YN, Jan LY, Rock JR.

Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16354-9. doi: 10.1073/pnas.1214596109. Epub 2012 Sep 17.


Evidence for type II cells as cells of origin of K-Ras-induced distal lung adenocarcinoma.

Xu X, Rock JR, Lu Y, Futtner C, Schwab B, Guinney J, Hogan BL, Onaitis MW.

Proc Natl Acad Sci U S A. 2012 Mar 27;109(13):4910-5. doi: 10.1073/pnas.1112499109. Epub 2012 Mar 12.


Multiple stromal populations contribute to pulmonary fibrosis without evidence for epithelial to mesenchymal transition.

Rock JR, Barkauskas CE, Cronce MJ, Xue Y, Harris JR, Liang J, Noble PW, Hogan BL.

Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):E1475-83. doi: 10.1073/pnas.1117988108. Epub 2011 Nov 28.


Cell plasticity in lung injury and repair: report from an NHLBI workshop, April 19-20, 2010.

Borok Z, Whitsett JA, Bitterman PB, Thannickal VJ, Kotton DN, Reynolds SD, Krasnow MA, Bianchi DW, Morrisey EE, Hogan BL, Kurie JM, Walker DC, Radisky DC, Nishimura SL, Violette SM, Noble PW, Shapiro SD, Blaisdell CJ, Chapman HA, Kiley J, Gail D, Hoshizaki D.

Proc Am Thorac Soc. 2011 Jun;8(3):215-22. doi: 10.1513/pats.201012-067CB.


Epithelial progenitor cells in lung development, maintenance, repair, and disease.

Rock JR, Hogan BL.

Annu Rev Cell Dev Biol. 2011;27:493-512. doi: 10.1146/annurev-cellbio-100109-104040. Epub 2011 May 31. Review.


Notch-dependent differentiation of adult airway basal stem cells.

Rock JR, Gao X, Xue Y, Randell SH, Kong YY, Hogan BL.

Cell Stem Cell. 2011 Jun 3;8(6):639-48. doi: 10.1016/j.stem.2011.04.003.


Role of E-cadherin in the pathogenesis of gastroesophageal reflux disease.

Jovov B, Que J, Tobey NA, Djukic Z, Hogan BL, Orlando RC.

Am J Gastroenterol. 2011 Jun;106(6):1039-47. doi: 10.1038/ajg.2011.102. Epub 2011 Mar 29.


BMP signaling in the development of the mouse esophagus and forestomach.

Rodriguez P, Da Silva S, Oxburgh L, Wang F, Hogan BL, Que J.

Development. 2010 Dec;137(24):4171-6. doi: 10.1242/dev.056077. Epub 2010 Nov 10.


Developmental biology. Branching takes nerve.

Rock JR, Hogan BL.

Science. 2010 Sep 24;329(5999):1610-1. doi: 10.1126/science.1196016. No abstract available.


Airway basal stem cells: a perspective on their roles in epithelial homeostasis and remodeling.

Rock JR, Randell SH, Hogan BL.

Dis Model Mech. 2010 Sep-Oct;3(9-10):545-56. doi: 10.1242/dmm.006031. Epub 2010 Aug 10. Review.


Evidence that SOX2 overexpression is oncogenic in the lung.

Lu Y, Futtner C, Rock JR, Xu X, Whitworth W, Hogan BL, Onaitis MW.

PLoS One. 2010 Jun 10;5(6):e11022. doi: 10.1371/journal.pone.0011022.


Preparing for the first breath: genetic and cellular mechanisms in lung development.

Morrisey EE, Hogan BL.

Dev Cell. 2010 Jan 19;18(1):8-23. doi: 10.1016/j.devcel.2009.12.010. Review.


The Id2+ distal tip lung epithelium contains individual multipotent embryonic progenitor cells.

Rawlins EL, Clark CP, Xue Y, Hogan BL.

Development. 2009 Nov;136(22):3741-5. doi: 10.1242/dev.037317.


Basal cells as stem cells of the mouse trachea and human airway epithelium.

Rock JR, Onaitis MW, Rawlins EL, Lu Y, Clark CP, Xue Y, Randell SH, Hogan BL.

Proc Natl Acad Sci U S A. 2009 Aug 4;106(31):12771-5. doi: 10.1073/pnas.0906850106. Epub 2009 Jul 22.


The role of Scgb1a1+ Clara cells in the long-term maintenance and repair of lung airway, but not alveolar, epithelium.

Rawlins EL, Okubo T, Xue Y, Brass DM, Auten RL, Hasegawa H, Wang F, Hogan BL.

Cell Stem Cell. 2009 Jun 5;4(6):525-34. doi: 10.1016/j.stem.2009.04.002.


Multiple roles for Sox2 in the developing and adult mouse trachea.

Que J, Luo X, Schwartz RJ, Hogan BL.

Development. 2009 Jun;136(11):1899-907. doi: 10.1242/dev.034629. Epub 2009 Apr 29.


Summary: present and future challenges for stem cell research.

Hogan BL.

Cold Spring Harb Symp Quant Biol. 2008;73:593-600. doi: 10.1101/sqb.2008.73.059. Epub 2009 Mar 27.


Cell lineage mapping of taste bud cells and keratinocytes in the mouse tongue and soft palate.

Okubo T, Clark C, Hogan BL.

Stem Cells. 2009 Feb;27(2):442-50. doi: 10.1634/stemcells.2008-0611.


Mouse primordial germ cells: isolation and in vitro culture.

Labosky PA, Hogan BL.

Methods Mol Biol. 2008;461:187-99. doi: 10.1007/978-1-60327-483-8_12. Review. No abstract available.


Epithelial stem/progenitor cells in lung postnatal growth, maintenance, and repair.

Rawlins EL, Okubo T, Que J, Xue Y, Clark C, Luo X, Hogan BL.

Cold Spring Harb Symp Quant Biol. 2008;73:291-5. doi: 10.1101/sqb.2008.73.037. Epub 2008 Nov 21. Review.


Mesothelium contributes to vascular smooth muscle and mesenchyme during lung development.

Que J, Wilm B, Hasegawa H, Wang F, Bader D, Hogan BL.

Proc Natl Acad Sci U S A. 2008 Oct 28;105(43):16626-30. doi: 10.1073/pnas.0808649105. Epub 2008 Oct 15.


Culture of endodermal stem/progenitor cells of the mouse tongue.

Luo X, Okubo T, Randell S, Hogan BL.

In Vitro Cell Dev Biol Anim. 2009 Jan-Feb;45(1-2):44-54. doi: 10.1007/s11626-008-9149-2. Epub 2008 Oct 2.


Ciliated epithelial cell lifespan in the mouse trachea and lung.

Rawlins EL, Hogan BL.

Am J Physiol Lung Cell Mol Physiol. 2008 Jul;295(1):L231-4. doi: 10.1152/ajplung.90209.2008. Epub 2008 May 16.


Bmp4 is essential for the formation of the vestibular apparatus that detects angular head movements.

Chang W, Lin Z, Kulessa H, Hebert J, Hogan BL, Wu DK.

PLoS Genet. 2008 Apr 11;4(4):e1000050. doi: 10.1371/journal.pgen.1000050.


Epithelial progenitor cells of the embryonic lung and the role of microRNAs in their proliferation.

Lu Y, Okubo T, Rawlins E, Hogan BL.

Proc Am Thorac Soc. 2008 Apr 15;5(3):300-4. doi: 10.1513/pats.200710-162DR.


Endothelial Bmp4 is induced during arterial remodeling: effects on smooth muscle cell migration and proliferation.

Corriere MA, Rogers CM, Eliason JL, Faulk J, Kume T, Hogan BL, Guzman RJ.

J Surg Res. 2008 Mar;145(1):142-9. Epub 2007 Aug 16.


Ankyrin-G is a molecular partner of E-cadherin in epithelial cells and early embryos.

Kizhatil K, Davis JQ, Davis L, Hoffman J, Hogan BL, Bennett V.

J Biol Chem. 2007 Sep 7;282(36):26552-61. Epub 2007 Jul 9.


Global gene expression profiling reveals similarities and differences among mouse pluripotent stem cells of different origins and strains.

Sharova LV, Sharov AA, Piao Y, Shaik N, Sullivan T, Stewart CL, Hogan BL, Ko MS.

Dev Biol. 2007 Jul 15;307(2):446-59. Epub 2007 May 10.


Multiple dose-dependent roles for Sox2 in the patterning and differentiation of anterior foregut endoderm.

Que J, Okubo T, Goldenring JR, Nam KT, Kurotani R, Morrisey EE, Taranova O, Pevny LH, Hogan BL.

Development. 2007 Jul;134(13):2521-31. Epub 2007 May 23.


Lung development and repair: contribution of the ciliated lineage.

Rawlins EL, Ostrowski LE, Randell SH, Hogan BL.

Proc Natl Acad Sci U S A. 2007 Jan 9;104(2):410-7. Epub 2006 Dec 28.


Sox2 is required for development of taste bud sensory cells.

Okubo T, Pevny LH, Hogan BL.

Genes Dev. 2006 Oct 1;20(19):2654-9.

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