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H+ transport by K+ EXCHANGE ANTIPORTER3 promotes photosynthesis and growth in chloroplast ATP synthase mutants.

Correa Galvis V, Strand DD, Messer M, Thiele W, Bethmann S, Hübner D, Uflewski M, Kaiser E, Siemiatkowska B, Morris BA, Toth SZ, Watanabe M, Brückner F, Hoefgen R, Jahns P, Schöttler MA, Armbruster U.

Plant Physiol. 2020 Feb 10. pii: pp.01561.2019. doi: 10.1104/pp.19.01561. [Epub ahead of print]


Non-aqueous fractionation revealed changing subcellular metabolite distribution during apple fruit development.

Beshir WF, Tohge T, Watanabe M, Hertog MLATM, Hoefgen R, Fernie AR, Nicolaï BM.

Hortic Res. 2019 Aug 11;6:98. doi: 10.1038/s41438-019-0178-7. eCollection 2019.


Multifaceted regulatory function of tomato SlTAF1 in the response to salinity stress.

Devkar V, Thirumalaikumar VP, Xue GP, Vallarino JG, Turečková V, Strnad M, Fernie AR, Hoefgen R, Mueller-Roeber B, Balazadeh S.

New Phytol. 2020 Feb;225(4):1681-1698. doi: 10.1111/nph.16247. Epub 2019 Nov 11.


Sulphur systems biology-making sense of omics data.

Watanabe M, Hoefgen R.

J Exp Bot. 2019 Aug 19;70(16):4155-4170. doi: 10.1093/jxb/erz260.


The ABCB7-Like Transporter PexA in Rhodobacter capsulatus Is Involved in the Translocation of Reactive Sulfur Species.

Riedel S, Siemiatkowska B, Watanabe M, Müller CS, Schünemann V, Hoefgen R, Leimkühler S.

Front Microbiol. 2019 Mar 13;10:406. doi: 10.3389/fmicb.2019.00406. eCollection 2019.


Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat.

Casartelli A, Melino VJ, Baumann U, Riboni M, Suchecki R, Jayasinghe NS, Mendis H, Watanabe M, Erban A, Zuther E, Hoefgen R, Roessner U, Okamoto M, Heuer S.

Plant Mol Biol. 2019 Mar;99(4-5):477-497. doi: 10.1007/s11103-019-00831-z. Epub 2019 Feb 5.


Plasmodium Para-Aminobenzoate Synthesis and Salvage Resolve Avoidance of Folate Competition and Adaptation to Host Diet.

Matz JM, Watanabe M, Falade M, Tohge T, Hoefgen R, Matuschewski K.

Cell Rep. 2019 Jan 8;26(2):356-363.e4. doi: 10.1016/j.celrep.2018.12.062.


Sulfite Reductase Co-suppression in Tobacco Reveals Detoxification Mechanisms and Downstream Responses Comparable to Sulfate Starvation.

Naumann M, Hubberten HM, Watanabe M, Hänsch R, Schöttler MA, Hoefgen R.

Front Plant Sci. 2018 Oct 15;9:1423. doi: 10.3389/fpls.2018.01423. eCollection 2018.


Metabolome and Lipidome Profiles of Populus × canescens Twig Tissues During Annual Growth Show Phospholipid-Linked Storage and Mobilization of C, N, and S.

Watanabe M, Netzer F, Tohge T, Orf I, Brotman Y, Dubbert D, Fernie AR, Rennenberg H, Hoefgen R, Herschbach C.

Front Plant Sci. 2018 Sep 5;9:1292. doi: 10.3389/fpls.2018.01292. eCollection 2018.


Feeding the Walls: How Does Nutrient Availability Regulate Cell Wall Composition?

Ogden M, Hoefgen R, Roessner U, Persson S, Khan GA.

Int J Mol Sci. 2018 Sep 10;19(9). pii: E2691. doi: 10.3390/ijms19092691. Review.


Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves.

Flis A, Mengin V, Ivakov AA, Mugford ST, Hubberten HM, Encke B, Krohn N, Höhne M, Feil R, Hoefgen R, Lunn JE, Millar AJ, Smith AM, Sulpice R, Stitt M.

Plant Cell Environ. 2019 Feb;42(2):549-573. doi: 10.1111/pce.13440.


Metabolic variation in the pulps of two durian cultivars: Unraveling the metabolites that contribute to the flavor.

Pinsorn P, Oikawa A, Watanabe M, Sasaki R, Ngamchuachit P, Hoefgen R, Saito K, Sirikantaramas S.

Food Chem. 2018 Dec 1;268:118-125. doi: 10.1016/j.foodchem.2018.06.066. Epub 2018 Jun 15.


The Effect of Single and Multiple SERAT Mutants on Serine and Sulfur Metabolism.

Watanabe M, Tohge T, Fernie AR, Hoefgen R.

Front Plant Sci. 2018 May 28;9:702. doi: 10.3389/fpls.2018.00702. eCollection 2018.


RAPTOR Controls Developmental Growth Transitions by Altering the Hormonal and Metabolic Balance.

Salem MA, Li Y, Bajdzienko K, Fisahn J, Watanabe M, Hoefgen R, Schöttler MA, Giavalisco P.

Plant Physiol. 2018 Jun;177(2):565-593. doi: 10.1104/pp.17.01711. Epub 2018 Apr 23.


CYSTATHIONINE GAMMA-SYNTHASE activity in rice is developmentally regulated and strongly correlated with sulfate.

Whitcomb SJ, Nguyen HC, Brückner F, Hesse H, Hoefgen R.

Plant Sci. 2018 May;270:234-244. doi: 10.1016/j.plantsci.2018.02.016. Epub 2018 Feb 21.


Comprehensive Metabolomics Studies of Plant Developmental Senescence.

Watanabe M, Tohge T, Balazadeh S, Erban A, Giavalisco P, Kopka J, Mueller-Roeber B, Fernie AR, Hoefgen R.

Methods Mol Biol. 2018;1744:339-358. doi: 10.1007/978-1-4939-7672-0_28.


Exploring traditional aus-type rice for metabolites conferring drought tolerance.

Casartelli A, Riewe D, Hubberten HM, Altmann T, Hoefgen R, Heuer S.

Rice (N Y). 2018 Jan 25;11(1):9. doi: 10.1186/s12284-017-0189-7.


Characterization of the Wheat Leaf Metabolome during Grain Filling and under Varied N-Supply.

Heyneke E, Watanabe M, Erban A, Duan G, Buchner P, Walther D, Kopka J, Hawkesford MJ, Hoefgen R.

Front Plant Sci. 2017 Nov 29;8:2048. doi: 10.3389/fpls.2017.02048. eCollection 2017.


The SAL-PAP Chloroplast Retrograde Pathway Contributes to Plant Immunity by Regulating Glucosinolate Pathway and Phytohormone Signaling.

Ishiga Y, Watanabe M, Ishiga T, Tohge T, Matsuura T, Ikeda Y, Hoefgen R, Fernie AR, Mysore KS.

Mol Plant Microbe Interact. 2017 Oct;30(10):829-841. doi: 10.1094/MPMI-03-17-0055-R. Epub 2017 Aug 22.


Tight control of sulfur assimilation: an adaptive mechanism for a plant from a severely phosphorus-impoverished habitat.

Prodhan MA, Jost R, Watanabe M, Hoefgen R, Lambers H, Finnegan PM.

New Phytol. 2017 Aug;215(3):1068-1079. doi: 10.1111/nph.14640. Epub 2017 Jun 28.


Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.).

Moschen S, Di Rienzo JA, Higgins J, Tohge T, Watanabe M, González S, Rivarola M, García-García F, Dopazo J, Hopp HE, Hoefgen R, Fernie AR, Paniego N, Fernández P, Heinz RA.

Plant Mol Biol. 2017 Jul;94(4-5):549-564. doi: 10.1007/s11103-017-0625-5. Epub 2017 Jun 21.


Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana.

Plötner B, Nurmi M, Fischer A, Watanabe M, Schneeberger K, Holm S, Vaid N, Schöttler MA, Walther D, Hoefgen R, Weigel D, Laitinen RAE.

Plant J. 2017 Jul;91(2):251-262. doi: 10.1111/tpj.13560. Epub 2017 May 30.


Tight control of nitrate acquisition in a plant species that evolved in an extremely phosphorus-impoverished environment.

Prodhan MA, Jost R, Watanabe M, Hoefgen R, Lambers H, Finnegan PM.

Plant Cell Environ. 2016 Dec;39(12):2754-2761. doi: 10.1111/pce.12853. Epub 2016 Nov 2.


Sulfur deficiency-induced repressor proteins optimize glucosinolate biosynthesis in plants.

Aarabi F, Kusajima M, Tohge T, Konishi T, Gigolashvili T, Takamune M, Sasazaki Y, Watanabe M, Nakashita H, Fernie AR, Saito K, Takahashi H, Hubberten HM, Hoefgen R, Maruyama-Nakashita A.

Sci Adv. 2016 Oct 7;2(10):e1601087. eCollection 2016 Oct.


Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae.

Tohge T, Wendenburg R, Ishihara H, Nakabayashi R, Watanabe M, Sulpice R, Hoefgen R, Takayama H, Saito K, Stitt M, Fernie AR.

Nat Commun. 2016 Aug 22;7:12399. doi: 10.1038/ncomms12399.


Metabolic and Transcriptional Analysis of Durum Wheat Responses to Elevated CO2 at Low and High Nitrate Supply.

Vicente R, Pérez P, Martínez-Carrasco R, Feil R, Lunn JE, Watanabe M, Arrivault S, Stitt M, Hoefgen R, Morcuende R.

Plant Cell Physiol. 2016 Oct;57(10):2133-2146. Epub 2016 Jul 20.


Trehalose 6-phosphate coordinates organic and amino acid metabolism with carbon availability.

Figueroa CM, Feil R, Ishihara H, Watanabe M, Kölling K, Krause U, Höhne M, Encke B, Plaxton WC, Zeeman SC, Li Z, Schulze WX, Hoefgen R, Stitt M, Lunn JE.

Plant J. 2016 Feb;85(3):410-23. doi: 10.1111/tpj.13114.


The Interplay between Sulfur and Iron Nutrition in Tomato.

Zuchi S, Watanabe M, Hubberten HM, Bromke M, Osorio S, Fernie AR, Celletti S, Paolacci AR, Catarcione G, Ciaffi M, Hoefgen R, Astolfi S.

Plant Physiol. 2015 Dec;169(4):2624-39. doi: 10.1104/pp.15.00995. Epub 2015 Oct 5.


Integrating transcriptomic and metabolomic analysis to understand natural leaf senescence in sunflower.

Moschen S, Bengoa Luoni S, Di Rienzo JA, Caro Mdel P, Tohge T, Watanabe M, Hollmann J, González S, Rivarola M, García-García F, Dopazo J, Hopp HE, Hoefgen R, Fernie AR, Paniego N, Fernández P, Heinz RA.

Plant Biotechnol J. 2016 Feb;14(2):719-34. doi: 10.1111/pbi.12422. Epub 2015 Jul 1.


Medicago truncatula Mtha1-2 mutants loose metabolic responses to mycorrhizal colonization.

Hubberten HM, Sieh D, Zöller D, Hoefgen R, Krajinski F.

Plant Signal Behav. 2015;10(6):e989025. doi: 10.4161/15592324.2014.989025.


Transcriptome and metabolome analysis of plant sulfate starvation and resupply provides novel information on transcriptional regulation of metabolism associated with sulfur, nitrogen and phosphorus nutritional responses in Arabidopsis.

Bielecka M, Watanabe M, Morcuende R, Scheible WR, Hawkesford MJ, Hesse H, Hoefgen R.

Front Plant Sci. 2015 Jan 28;5:805. doi: 10.3389/fpls.2014.00805. eCollection 2014.


Metabolomic profiling of the purple sulfur bacterium Allochromatium vinosum during growth on different reduced sulfur compounds and malate.

Weissgerber T, Watanabe M, Hoefgen R, Dahl C.

Metabolomics. 2014;10(6):1094-1112. doi: 10.1007/s11306-014-0649-7. Epub 2014 May 22.


Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway.

Weits DA, Giuntoli B, Kosmacz M, Parlanti S, Hubberten HM, Riegler H, Hoefgen R, Perata P, van Dongen JT, Licausi F.

Nat Commun. 2014 Mar 6;5:3425. doi: 10.1038/ncomms4425.


SALT-RESPONSIVE ERF1 is a negative regulator of grain filling and gibberellin-mediated seedling establishment in rice.

Schmidt R, Schippers JH, Mieulet D, Watanabe M, Hoefgen R, Guiderdoni E, Mueller-Roeber B.

Mol Plant. 2014 Feb;7(2):404-21. doi: 10.1093/mp/sst131. Epub 2013 Sep 17.


Salt-responsive ERF1 regulates reactive oxygen species-dependent signaling during the initial response to salt stress in rice.

Schmidt R, Mieulet D, Hubberten HM, Obata T, Hoefgen R, Fernie AR, Fisahn J, San Segundo B, Guiderdoni E, Schippers JH, Mueller-Roeber B.

Plant Cell. 2013 Jun;25(6):2115-31. doi: 10.1105/tpc.113.113068. Epub 2013 Jun 25.


Comprehensive dissection of spatiotemporal metabolic shifts in primary, secondary, and lipid metabolism during developmental senescence in Arabidopsis.

Watanabe M, Balazadeh S, Tohge T, Erban A, Giavalisco P, Kopka J, Mueller-Roeber B, Fernie AR, Hoefgen R.

Plant Physiol. 2013 Jul;162(3):1290-310. doi: 10.1104/pp.113.217380. Epub 2013 May 21.


Shikimate and phenylalanine biosynthesis in the green lineage.

Tohge T, Watanabe M, Hoefgen R, Fernie AR.

Front Plant Sci. 2013 Mar 27;4:62. doi: 10.3389/fpls.2013.00062. eCollection 2013.


Phylogenetic aspects of the sulfate assimilation genes from Thalassiosira pseudonana.

Bromke MA, Hoefgen R, Hesse H.

Amino Acids. 2013 May;44(5):1253-65. doi: 10.1007/s00726-013-1462-8. Epub 2013 Jan 26. Review.


The evolution of phenylpropanoid metabolism in the green lineage.

Tohge T, Watanabe M, Hoefgen R, Fernie AR.

Crit Rev Biochem Mol Biol. 2013 Mar-Apr;48(2):123-52. doi: 10.3109/10409238.2012.758083. Epub 2013 Jan 25. Review.


The arbuscular mycorrhizal symbiosis influences sulfur starvation responses of Medicago truncatula.

Sieh D, Watanabe M, Devers EA, Brueckner F, Hoefgen R, Krajinski F.

New Phytol. 2013 Jan;197(2):606-16. doi: 10.1111/nph.12034. Epub 2012 Nov 28.


Activation of R-mediated innate immunity and disease susceptibility is affected by mutations in a cytosolic O-acetylserine (thiol) lyase in Arabidopsis.

Tahir J, Watanabe M, Jing HC, Hunter DA, Tohge T, Nunes-Nesi A, Brotman Y, Fernie AR, Hoefgen R, Dijkwel PP.

Plant J. 2013 Jan;73(1):118-30. doi: 10.1111/tpj.12021. Epub 2012 Nov 5.


Local and systemic regulation of sulfur homeostasis in roots of Arabidopsis thaliana.

Hubberten HM, Drozd A, Tran BV, Hesse H, Hoefgen R.

Plant J. 2012 Nov;72(4):625-35. doi: 10.1111/j.1365-313X.2012.05105.x. Epub 2012 Sep 20.


Additional role of O-acetylserine as a sulfur status-independent regulator during plant growth.

Hubberten HM, Klie S, Caldana C, Degenkolbe T, Willmitzer L, Hoefgen R.

Plant J. 2012 May;70(4):666-77. doi: 10.1111/j.1365-313X.2012.04905.x. Epub 2012 Mar 8.


Perturbation of Arabidopsis amino acid metabolism causes incompatibility with the adapted biotrophic pathogen Hyaloperonospora arabidopsidis.

Stuttmann J, Hubberten HM, Rietz S, Kaur J, Muskett P, Guerois R, Bednarek P, Hoefgen R, Parker JE.

Plant Cell. 2011 Jul;23(7):2788-803. doi: 10.1105/tpc.111.087684. Epub 2011 Jul 22.


Photosynthesis and metabolism interact during acclimation of Arabidopsis thaliana to high irradiance and sulphur depletion.

Wulff-Zottele C, Gatzke N, Kopka J, Orellana A, Hoefgen R, Fisahn J, Hesse H.

Plant Cell Environ. 2010 Nov;33(11):1974-88. doi: 10.1111/j.1365-3040.2010.02199.x.


Identification of Arabidopsis mutants impaired in the systemic regulation of root nitrate uptake by the nitrogen status of the plant.

Girin T, El-Kafafi el-S, Widiez T, Erban A, Hubberten HM, Kopka J, Hoefgen R, Gojon A, Lepetit M.

Plant Physiol. 2010 Jul;153(3):1250-60. doi: 10.1104/pp.110.157354. Epub 2010 May 6.


Impact of sulfur starvation on cysteine biosynthesis in T-DNA mutants deficient for compartment-specific serine-acetyltransferase.

Krueger S, Donath A, Lopez-Martin MC, Hoefgen R, Gotor C, Hesse H.

Amino Acids. 2010 Oct;39(4):1029-42. doi: 10.1007/s00726-010-0580-9. Epub 2010 Apr 9.


General regulatory patterns of plant mineral nutrient depletion as revealed by serat quadruple mutants disturbed in cysteine synthesis.

Watanabe M, Hubberten HM, Saito K, Hoefgen R.

Mol Plant. 2010 Mar;3(2):438-66. doi: 10.1093/mp/ssq009.


Supply of sulphur to S-deficient young barley seedlings restores their capability to cope with iron shortage.

Astolfi S, Zuchi S, Hubberten HM, Pinton R, Hoefgen R.

J Exp Bot. 2010 Mar;61(3):799-806. doi: 10.1093/jxb/erp346. Epub 2009 Dec 16.

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