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Items: 50

1.

Early Sex-Chromosome Evolution in the Diploid Dioecious Plant Mercurialis annua.

Veltsos P, Ridout KE, Toups MA, González-Martínez SC, Muyle A, Emery O, Rastas P, Hudzieczek V, Hobza R, Vyskot B, Marais GAB, Filatov DA, Pannell JR.

Genetics. 2019 Jul;212(3):815-835. doi: 10.1534/genetics.119.302045. Epub 2019 May 21.

PMID:
31113811
2.

The distribution of epigenetic histone marks differs between the X and Y chromosomes in Silene latifolia.

Bačovský V, Houben A, Kumke K, Hobza R.

Planta. 2019 Aug;250(2):487-494. doi: 10.1007/s00425-019-03182-7. Epub 2019 May 8.

PMID:
31069521
3.

Evolution of sex determination and heterogamety changes in section Otites of the genus Silene.

Balounova V, Gogela R, Cegan R, Cangren P, Zluvova J, Safar J, Kovacova V, Bergero R, Hobza R, Vyskot B, Oxelman B, Charlesworth D, Janousek B.

Sci Rep. 2019 Jan 31;9(1):1045. doi: 10.1038/s41598-018-37412-x.

4.

Genomic imprinting mediates dosage compensation in a young plant XY system.

Muyle A, Zemp N, Fruchard C, Cegan R, Vrana J, Deschamps C, Tavares R, Hobza R, Picard F, Widmer A, Marais GAB.

Nat Plants. 2018 Sep;4(9):677-680. doi: 10.1038/s41477-018-0221-y. Epub 2018 Aug 13.

PMID:
30104649
5.

Sex and the flower - developmental aspects of sex chromosome evolution.

Hobza R, Hudzieczek V, Kubat Z, Cegan R, Vyskot B, Kejnovsky E, Janousek B.

Ann Bot. 2018 Dec 31;122(7):1085-1101. doi: 10.1093/aob/mcy130.

PMID:
30032185
6.

DNA methylation and genetic degeneration of the Y chromosome in the dioecious plant Silene latifolia.

Rodríguez Lorenzo JL, Hobza R, Vyskot B.

BMC Genomics. 2018 Jul 16;19(1):540. doi: 10.1186/s12864-018-4936-y.

7.

Agrobacterium rhizogenes-mediated transformation of a dioecious plant model Silene latifolia.

Hudzieczek V, Cegan R, Cermak T, Bacovska N, Machalkova Z, Dolezal K, Plihalova L, Voytas D, Hobza R, Vyskot B.

N Biotechnol. 2019 Jan 25;48:20-28. doi: 10.1016/j.nbt.2018.04.001. Epub 2018 Apr 12.

8.

The slowdown of Y chromosome expansion in dioecious Silene latifolia due to DNA loss and male-specific silencing of retrotransposons.

Puterova J, Kubat Z, Kejnovsky E, Jesionek W, Cizkova J, Vyskot B, Hobza R.

BMC Genomics. 2018 Feb 20;19(1):153. doi: 10.1186/s12864-018-4547-7.

9.

Impact of Repetitive Elements on the Y Chromosome Formation in Plants.

Hobza R, Cegan R, Jesionek W, Kejnovsky E, Vyskot B, Kubat Z.

Genes (Basel). 2017 Nov 1;8(11). pii: E302. doi: 10.3390/genes8110302. Review.

10.

Technical Review: Cytogenetic Tools for Studying Mitotic Chromosomes.

Bačovský V, Hobza R, Vyskot B.

Methods Mol Biol. 2018;1675:509-535. doi: 10.1007/978-1-4939-7318-7_30. Review.

PMID:
29052211
11.

Transcriptome of barley under three different heavy metal stress reaction.

Kintlová M, Blavet N, Cegan R, Hobza R.

Genom Data. 2017 May 22;13:15-17. doi: 10.1016/j.gdata.2017.05.016. eCollection 2017 Sep.

12.

De novo transcriptome assembly of heavy metal tolerant Silene dioica.

Cegan R, Hudzieczek V, Hobza R.

Genom Data. 2017 Jan 26;11:118-119. doi: 10.1016/j.gdata.2017.01.004. eCollection 2017 Mar.

13.

Multiple horizontal transfers of nuclear ribosomal genes between phylogenetically distinct grass lineages.

Mahelka V, Krak K, Kopecký D, Fehrer J, Šafář J, Bartoš J, Hobza R, Blavet N, Blattner FR.

Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):1726-1731. doi: 10.1073/pnas.1613375114. Epub 2017 Jan 30.

14.

Satellite DNA and Transposable Elements in Seabuckthorn (Hippophae rhamnoides), a Dioecious Plant with Small Y and Large X Chromosomes.

Puterova J, Razumova O, Martinek T, Alexandrov O, Divashuk M, Kubat Z, Hobza R, Karlov G, Kejnovsky E.

Genome Biol Evol. 2017 Jan 1;9(1):197-212. doi: 10.1093/gbe/evw303.

15.

Impact of repetitive DNA on sex chromosome evolution in plants.

Hobza R, Kubat Z, Cegan R, Jesionek W, Vyskot B, Kejnovsky E.

Chromosome Res. 2015 Sep;23(3):561-70. doi: 10.1007/s10577-015-9496-2.

PMID:
26474787
16.

Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia.

Blavet N, Blavet H, Muyle A, Käfer J, Cegan R, Deschamps C, Zemp N, Mousset S, Aubourg S, Bergero R, Charlesworth D, Hobza R, Widmer A, Marais GA.

BMC Genomics. 2015 Jul 25;16:546. doi: 10.1186/s12864-015-1698-7.

17.

The genomics of plant sex chromosomes.

Vyskot B, Hobza R.

Plant Sci. 2015 Jul;236:126-35. doi: 10.1016/j.plantsci.2015.03.019. Epub 2015 Apr 2. Review.

PMID:
26025526
18.

Fully automated pipeline for detection of sex linked genes using RNA-Seq data.

Michalovova M, Kubat Z, Hobza R, Vyskot B, Kejnovsky E.

BMC Bioinformatics. 2015 Mar 11;16:78. doi: 10.1186/s12859-015-0509-0.

19.

The X chromosome is necessary for somatic development in the dioecious Silene latifolia: cytogenetic and molecular evidence and sequencing of a haploid genome.

Soukupova M, Nevrtalova E, Cížková J, Vogel I, Cegan R, Hobza R, Vyskot B.

Cytogenet Genome Res. 2014;143(1-3):96-103. doi: 10.1159/000363431. Epub 2014 Jun 27.

PMID:
24993893
20.

Characterization of the HMA7 gene and transcriptomic analysis of candidate genes for copper tolerance in two Silene vulgaris ecotypes.

Baloun J, Nevrtalova E, Kovacova V, Hudzieczek V, Cegan R, Vyskot B, Hobza R.

J Plant Physiol. 2014 Aug 15;171(13):1188-96. doi: 10.1016/j.jplph.2014.04.014. Epub 2014 May 21.

PMID:
24973591
21.

Identification of a novel retrotransposon with sex chromosome-specific distribution in Silene latifolia.

Kralova T, Cegan R, Kubat Z, Vrana J, Vyskot B, Vogel I, Kejnovsky E, Hobza R.

Cytogenet Genome Res. 2014;143(1-3):87-95. doi: 10.1159/000362142. Epub 2014 Apr 15.

PMID:
24751661
22.

Expression response of duplicated metallothionein 3 gene to copper stress in Silene vulgaris ecotypes.

Nevrtalova E, Baloun J, Hudzieczek V, Cegan R, Vyskot B, Dolezel J, Safar J, Milde D, Hobza R.

Protoplasma. 2014 Nov;251(6):1427-39. doi: 10.1007/s00709-014-0644-x. Epub 2014 Apr 20.

PMID:
24748066
23.

Possible mechanisms responsible for absence of a retrotransposon family on a plant Y chromosome.

Kubat Z, Zluvova J, Vogel I, Kovacova V, Cermak T, Cegan R, Hobza R, Vyskot B, Kejnovsky E.

New Phytol. 2014 Apr;202(2):662-78. doi: 10.1111/nph.12669. Epub 2014 Jan 23.

24.

Strong accumulation of chloroplast DNA in the Y chromosomes of Rumex acetosa and Silene latifolia.

Steflova P, Hobza R, Vyskot B, Kejnovsky E.

Cytogenet Genome Res. 2014;142(1):59-65. doi: 10.1159/000355212. Epub 2013 Sep 14.

PMID:
24051898
25.

Contrasting patterns of transposable element and satellite distribution on sex chromosomes (XY1Y2) in the dioecious plant Rumex acetosa.

Steflova P, Tokan V, Vogel I, Lexa M, Macas J, Novak P, Hobza R, Vyskot B, Kejnovsky E.

Genome Biol Evol. 2013;5(4):769-82. doi: 10.1093/gbe/evt049.

26.

Expansion of microsatellites on evolutionary young Y chromosome.

Kejnovský E, Michalovova M, Steflova P, Kejnovska I, Manzano S, Hobza R, Kubat Z, Kovarik J, Jamilena M, Vyskot B.

PLoS One. 2013;8(1):e45519. doi: 10.1371/journal.pone.0045519. Epub 2013 Jan 16.

27.

Comparative analysis of a plant pseudoautosomal region (PAR) in Silene latifolia with the corresponding S. vulgaris autosome.

Blavet N, Blavet H, Cegan R, Zemp N, Zdanska J, Janoušek B, Hobza R, Widmer A.

BMC Genomics. 2012 Jun 8;13:226. doi: 10.1186/1471-2164-13-226.

28.

Genomic diversity in two related plant species with and without sex chromosomes--Silene latifolia and S. vulgaris.

Cegan R, Vyskot B, Kejnovsky E, Kubat Z, Blavet H, Šafář J, Doležel J, Blavet N, Hobza R.

PLoS One. 2012;7(2):e31898. doi: 10.1371/journal.pone.0031898. Epub 2012 Feb 29.

29.

Plant centromeric retrotransposons: a structural and cytogenetic perspective.

Neumann P, Navrátilová A, Koblížková A, Kejnovský E, Hřibová E, Hobza R, Widmer A, Doležel J, Macas J.

Mob DNA. 2011 Mar 3;2(1):4. doi: 10.1186/1759-8753-2-4.

30.

Structure and evolution of Apetala3, a sex-linked gene in Silene latifolia.

Cegan R, Marais GA, Kubekova H, Blavet N, Widmer A, Vyskot B, Dolezel J, Safár J, Hobza R.

BMC Plant Biol. 2010 Aug 18;10:180. doi: 10.1186/1471-2229-10-180.

31.

The role of repetitive DNA in structure and evolution of sex chromosomes in plants.

Kejnovsky E, Hobza R, Cermak T, Kubat Z, Vyskot B.

Heredity (Edinb). 2009 Jun;102(6):533-41. doi: 10.1038/hdy.2009.17. Epub 2009 Mar 11. Review.

32.

Efficient molecular sexing in dioecious Silene latifolia and S. dioica and paternity analysis in F(1) hybrids.

Hobza R, Widmer A.

Mol Ecol Resour. 2008 Nov;8(6):1274-6. doi: 10.1111/j.1755-0998.2008.02344.x.

PMID:
21586019
33.

Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes.

Cermak T, Kubat Z, Hobza R, Koblizkova A, Widmer A, Macas J, Vyskot B, Kejnovsky E.

Chromosome Res. 2008;16(7):961-76. doi: 10.1007/s10577-008-1254-2. Epub 2008 Oct 15.

PMID:
18853265
34.

Independent origin of sex chromosomes in two species of the genus Silene.

Mrackova M, Nicolas M, Hobza R, Negrutiu I, Monéger F, Widmer A, Vyskot B, Janousek B.

Genetics. 2008 Jun;179(2):1129-33. doi: 10.1534/genetics.107.085670.

35.

Microsatellite accumulation on the Y chromosome in Silene latifolia.

Kubat Z, Hobza R, Vyskot B, Kejnovsky E.

Genome. 2008 May;51(5):350-6. doi: 10.1139/G08-024.

PMID:
18438438
36.

Evidence for degeneration of the Y chromosome in the dioecious plant Silene latifolia.

Marais GA, Nicolas M, Bergero R, Chambrier P, Kejnovsky E, Monéger F, Hobza R, Widmer A, Charlesworth D.

Curr Biol. 2008 Apr 8;18(7):545-9. doi: 10.1016/j.cub.2008.03.023.

37.

The role of chromosomal rearrangements in the evolution of Silene latifolia sex chromosomes.

Hobza R, Kejnovsky E, Vyskot B, Widmer A.

Mol Genet Genomics. 2007 Dec;278(6):633-8. Epub 2007 Aug 2.

PMID:
17671795
38.

Laser microdissection-based analysis of plant sex chromosomes.

Hobza R, Vyskot B.

Methods Cell Biol. 2007;82:433-53.

PMID:
17586267
39.

Chromosomal location and gene paucity of the male specific region on papaya Y chromosome.

Yu Q, Hou S, Hobza R, Feltus FA, Wang X, Jin W, Skelton RL, Blas A, Lemke C, Saw JH, Moore PH, Alam M, Jiang J, Paterson AH, Vyskot B, Ming R.

Mol Genet Genomics. 2007 Aug;278(2):177-85. Epub 2007 May 23.

PMID:
17520292
40.

High intrachromosomal similarity of retrotransposon long terminal repeats: evidence for homogenization by gene conversion on plant sex chromosomes?

Kejnovsky E, Hobza R, Kubat Z, Widmer A, Marais GA, Vyskot B.

Gene. 2007 Apr 1;390(1-2):92-7. Epub 2006 Oct 24.

PMID:
17134852
41.

Accumulation of chloroplast DNA sequences on the Y chromosome of Silene latifolia.

Kejnovsky E, Kubat Z, Hobza R, Lengerova M, Sato S, Tabata S, Fukui K, Matsunaga S, Vyskot B.

Genetica. 2006 Sep-Nov;128(1-3):167-75.

PMID:
17028949
42.

Retand: a novel family of gypsy-like retrotransposons harboring an amplified tandem repeat.

Kejnovsky E, Kubat Z, Macas J, Hobza R, Mracek J, Vyskot B.

Mol Genet Genomics. 2006 Sep;276(3):254-63. Epub 2006 Jul 7.

PMID:
16826419
43.

MK17, a specific marker closely linked to the gynoecium suppression region on the Y chromosome in Silene latifolia.

Hobza R, Hrusakova P, Safar J, Bartos J, Janousek B, Zluvova J, Michu E, Dolezel J, Vyskot B.

Theor Appl Genet. 2006 Jul;113(2):280-7. Epub 2006 May 18.

PMID:
16791694
44.

An accumulation of tandem DNA repeats on the Y chromosome in Silene latifolia during early stages of sex chromosome evolution.

Hobza R, Lengerova M, Svoboda J, Kubekova H, Kejnovsky E, Vyskot B.

Chromosoma. 2006 Oct;115(5):376-82. Epub 2006 Apr 13.

PMID:
16612641
45.

The inter-specific hybrid Silene latifolia x S. viscosa reveals early events of sex chromosome evolution.

Zluvova J, Lengerova M, Markova M, Hobza R, Nicolas M, Vyskot B, Charlesworth D, Negrutiu I, Janousek B.

Evol Dev. 2005 Jul-Aug;7(4):327-36.

PMID:
15982369
46.

Gender in plants: sex chromosomes are emerging from the fog.

Vyskot B, Hobza R.

Trends Genet. 2004 Sep;20(9):432-8. Review.

PMID:
15313552
47.

FAST-FISH with laser beam microdissected DOP-PCR probe distinguishes the sex chromosomes of Silene latifolia.

Hobza R, Lengerova M, Cernohorska H, Rubes J, Vyskot B.

Chromosome Res. 2004;12(3):245-50.

PMID:
15125638
48.

Multicolor FISH mapping of the dioecious model plant, Silene latifolia.

Lengerova M, Kejnovsky E, Hobza R, Macas J, Grant SR, Vyskot B.

Theor Appl Genet. 2004 May;108(7):1193-9. Epub 2004 Jan 16.

PMID:
14727034
49.
50.

Trypanosoma avium: large minicircles in the kinetoplast DNA.

Yurchenko V, Hobza R, Benada O, Lukes J.

Exp Parasitol. 1999 Jul;92(3):215-8. No abstract available.

PMID:
10403763

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