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Items: 1 to 50 of 68

1.

A Nearly Complete Genome of Ciona intestinalis Type A (C. robusta) Reveals the Contribution of Inversion to Chromosomal Evolution in the Genus Ciona.

Satou Y, Nakamura R, Yu D, Yoshida R, Hamada M, Fujie M, Hisata K, Takeda H, Satoh N.

Genome Biol Evol. 2019 Nov 1;11(11):3144-3157. doi: 10.1093/gbe/evz228.

2.

Alternative mRNA Splicing in Three Venom Families Underlying a Possible Production of Divergent Venom Proteins of the Habu Snake, Protobothrops flavoviridis.

Ogawa T, Oda-Ueda N, Hisata K, Nakamura H, Chijiwa T, Hattori S, Isomoto A, Yugeta H, Yamasaki S, Fukumaki Y, Ohno M, Satoh N, Shibata H.

Toxins (Basel). 2019 Oct 9;11(10). pii: E581. doi: 10.3390/toxins11100581.

3.

Intrauterine growth restriction affects z-scores of anthropometric parameters during the first 6 years in very low-birth-weight-children born at less than 30 weeks of gestation.

Shoji H, Watanabe A, Awaji A, Ikeda N, Hosozawa M, Ohkawa N, Nishizaki N, Hisata K, Kantake M, Obinata K, Shimizu T.

J Dev Orig Health Dis. 2020 Feb;11(1):44-48. doi: 10.1017/S2040174419000369. Epub 2019 Jun 24.

PMID:
31232255
4.

Amoxicillin effect on bacterial load in group A streptococcal pharyngitis: comparison of single and multiple daily dosage regimens.

Nakao A, Hisata K, Fujimori M, Matsunaga N, Komatsu M, Shimizu T.

BMC Pediatr. 2019 Jun 21;19(1):205. doi: 10.1186/s12887-019-1582-8.

5.

Neonatal oral fluid as a transmission route for bifidobacteria to the infant gut immediately after birth.

Toda K, Hisata K, Satoh T, Katsumata N, Odamaki T, Mitsuyama E, Katayama T, Kuhara T, Aisaka K, Shimizu T, Xiao JZ.

Sci Rep. 2019 Jun 18;9(1):8692. doi: 10.1038/s41598-019-45198-9.

6.

A draft nuclear-genome assembly of the acoel flatworm Praesagittifera naikaiensis.

Arimoto A, Hikosaka-Katayama T, Hikosaka A, Tagawa K, Inoue T, Ueki T, Yoshida MA, Kanda M, Shoguchi E, Hisata K, Satoh N.

Gigascience. 2019 Apr 1;8(4). pii: giz023. doi: 10.1093/gigascience/giz023.

7.

A siphonous macroalgal genome suggests convergent functions of homeobox genes in algae and land plants.

Arimoto A, Nishitsuji K, Higa Y, Arakaki N, Hisata K, Shinzato C, Satoh N, Shoguchi E.

DNA Res. 2019 Apr 1;26(2):183-192. doi: 10.1093/dnares/dsz002.

8.

Diversified secondary metabolite biosynthesis gene repertoire revealed in symbiotic dinoflagellates.

Beedessee G, Hisata K, Roy MC, Van Dolah FM, Satoh N, Shoguchi E.

Sci Rep. 2019 Feb 4;9(1):1204. doi: 10.1038/s41598-018-37792-0.

9.

A draft genome of the striped catfish, Pangasianodon hypophthalmus, for comparative analysis of genes relevant to development and a resource for aquaculture improvement.

Kim OTP, Nguyen PT, Shoguchi E, Hisata K, Vo TTB, Inoue J, Shinzato C, Le BTN, Nishitsuji K, Kanda M, Nguyen VH, Nong HV, Satoh N.

BMC Genomics. 2018 Oct 5;19(1):733. doi: 10.1186/s12864-018-5079-x.

10.

The habu genome reveals accelerated evolution of venom protein genes.

Shibata H, Chijiwa T, Oda-Ueda N, Nakamura H, Yamaguchi K, Hattori S, Matsubara K, Matsuda Y, Yamashita A, Isomoto A, Mori K, Tashiro K, Kuhara S, Yamasaki S, Fujie M, Goto H, Koyanagi R, Takeuchi T, Fukumaki Y, Ohno M, Shoguchi E, Hisata K, Satoh N, Ogawa T.

Sci Rep. 2018 Jul 26;8(1):11300. doi: 10.1038/s41598-018-28749-4.

11.

Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes.

Shoguchi E, Beedessee G, Tada I, Hisata K, Kawashima T, Takeuchi T, Arakaki N, Fujie M, Koyanagi R, Roy MC, Kawachi M, Hidaka M, Satoh N, Shinzato C.

BMC Genomics. 2018 Jun 14;19(1):458. doi: 10.1186/s12864-018-4857-9.

12.

Choline-related metabolites influenced by feeding patterns in preterm and term infants.

Shoji H, Taka H, Kaga N, Ikeda N, Hisata K, Miura Y, Shimizu T.

J Matern Fetal Neonatal Med. 2020 Jan;33(2):230-235. doi: 10.1080/14767058.2018.1488165. Epub 2018 Jul 22.

PMID:
29886808
13.

A Possible Trifunctional β-Carotene Synthase Gene Identified in the Draft Genome of Aurantiochytrium sp. Strain KH105.

Iwasaka H, Koyanagi R, Satoh R, Nagano A, Watanabe K, Hisata K, Satoh N, Aki T.

Genes (Basel). 2018 Apr 9;9(4). pii: E200. doi: 10.3390/genes9040200.

14.

Breast-feeding regulates immune system development via transforming growth factor-β in mice pups.

Sakaguchi K, Koyanagi A, Kamachi F, Harauma A, Chiba A, Hisata K, Moriguchi T, Shimizu T, Miyake S.

Pediatr Int. 2018 Mar;60(3):224-231. doi: 10.1111/ped.13507.

PMID:
29290091
15.

Nemertean and phoronid genomes reveal lophotrochozoan evolution and the origin of bilaterian heads.

Luo YJ, Kanda M, Koyanagi R, Hisata K, Akiyama T, Sakamoto H, Sakamoto T, Satoh N.

Nat Ecol Evol. 2018 Jan;2(1):141-151. doi: 10.1038/s41559-017-0389-y. Epub 2017 Dec 4.

PMID:
29203924
16.

Association of zinc and copper with clinical parameters in the preterm newborn.

Kojima C, Shoji H, Ikeda N, Kitamura T, Hisata K, Shimizu T.

Pediatr Int. 2017 Nov;59(11):1165-1168. doi: 10.1111/ped.13409. Epub 2017 Oct 24.

PMID:
28851072
17.

The crown-of-thorns starfish genome as a guide for biocontrol of this coral reef pest.

Hall MR, Kocot KM, Baughman KW, Fernandez-Valverde SL, Gauthier MEA, Hatleberg WL, Krishnan A, McDougall C, Motti CA, Shoguchi E, Wang T, Xiang X, Zhao M, Bose U, Shinzato C, Hisata K, Fujie M, Kanda M, Cummins SF, Satoh N, Degnan SM, Degnan BM.

Nature. 2017 Apr 5;544(7649):231-234. doi: 10.1038/nature22033.

PMID:
28379940
18.

Relationship between copper and lipids and atherogenic indices soon after birth in Japanese preterm infants of 32-35 weeks.

Shoji H, Ikeda N, Kojima C, Kitamura T, Suganuma H, Hisata K, Hirayama S, Ueno T, Miida T, Shimizu T.

J Dev Orig Health Dis. 2017 Apr;8(2):256-260. doi: 10.1017/S2040174416000684. Epub 2016 Dec 20.

PMID:
27995841
19.

A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of 'mozuku' biology.

Nishitsuji K, Arimoto A, Iwai K, Sudo Y, Hisata K, Fujie M, Arakaki N, Kushiro T, Konishi T, Shinzato C, Satoh N, Shoguchi E.

DNA Res. 2016 Dec;23(6):561-570. Epub 2016 Aug 8.

20.

Influence of gestational age on serum incretin levels in preterm infants.

Shoji H, Watanabe A, Ikeda N, Mori M, Kitamura T, Hisata K, Shimizu T.

J Dev Orig Health Dis. 2016 Dec;7(6):685-688. Epub 2016 Jul 25.

PMID:
27451916
21.

Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle.

Takeuchi T, Koyanagi R, Gyoja F, Kanda M, Hisata K, Fujie M, Goto H, Yamasaki S, Nagai K, Morino Y, Miyamoto H, Endo K, Endo H, Nagasawa H, Kinoshita S, Asakawa S, Watabe S, Satoh N, Kawashima T.

Zoological Lett. 2016 Feb 18;2:3. doi: 10.1186/s40851-016-0039-2. eCollection 2016.

22.

Clinically silent seizures in a neonate with tuberous sclerosis.

Ikeno M, Okumura A, Abe S, Igarashi A, Hisata K, Shoji H, Shimizu T.

Pediatr Int. 2016 Jan;58(1):58-61. doi: 10.1111/ped.12738. Epub 2015 Dec 29.

PMID:
26712128
23.

Hemichordate genomes and deuterostome origins.

Simakov O, Kawashima T, Marlétaz F, Jenkins J, Koyanagi R, Mitros T, Hisata K, Bredeson J, Shoguchi E, Gyoja F, Yue JX, Chen YC, Freeman RM Jr, Sasaki A, Hikosaka-Katayama T, Sato A, Fujie M, Baughman KW, Levine J, Gonzalez P, Cameron C, Fritzenwanker JH, Pani AM, Goto H, Kanda M, Arakaki N, Yamasaki S, Qu J, Cree A, Ding Y, Dinh HH, Dugan S, Holder M, Jhangiani SN, Kovar CL, Lee SL, Lewis LR, Morton D, Nazareth LV, Okwuonu G, Santibanez J, Chen R, Richards S, Muzny DM, Gillis A, Peshkin L, Wu M, Humphreys T, Su YH, Putnam NH, Schmutz J, Fujiyama A, Yu JK, Tagawa K, Worley KC, Gibbs RA, Kirschner MW, Lowe CJ, Satoh N, Rokhsar DS, Gerhart J.

Nature. 2015 Nov 26;527(7579):459-65. doi: 10.1038/nature16150. Epub 2015 Nov 18.

24.

Multifunctional polyketide synthase genes identified by genomic survey of the symbiotic dinoflagellate, Symbiodinium minutum.

Beedessee G, Hisata K, Roy MC, Satoh N, Shoguchi E.

BMC Genomics. 2015 Nov 14;16:941. doi: 10.1186/s12864-015-2195-8.

25.

The Large Mitochondrial Genome of Symbiodinium minutum Reveals Conserved Noncoding Sequences between Dinoflagellates and Apicomplexans.

Shoguchi E, Shinzato C, Hisata K, Satoh N, Mungpakdee S.

Genome Biol Evol. 2015 Jul 20;7(8):2237-44. doi: 10.1093/gbe/evv137.

26.
27.

On a possible evolutionary link of the stomochord of hemichordates to pharyngeal organs of chordates.

Satoh N, Tagawa K, Lowe CJ, Yu JK, Kawashima T, Takahashi H, Ogasawara M, Kirschner M, Hisata K, Su YH, Gerhart J.

Genesis. 2014 Dec;52(12):925-34. doi: 10.1002/dvg.22831. Epub 2014 Nov 4. Review.

28.

Effects of breastfeeding on the risk factors for metabolic syndrome in preterm infants.

Ikeda N, Shoji H, Murano Y, Mori M, Matsunaga N, Suganuma H, Ikeno M, Hisata K, Hirayama S, Ueno T, Miida T, Shimizu T.

J Dev Orig Health Dis. 2014 Dec;5(6):459-64. doi: 10.1017/S2040174414000397. Epub 2014 Aug 28.

PMID:
25167084
29.

Massive gene transfer and extensive RNA editing of a symbiotic dinoflagellate plastid genome.

Mungpakdee S, Shinzato C, Takeuchi T, Kawashima T, Koyanagi R, Hisata K, Tanaka M, Goto H, Fujie M, Lin S, Satoh N, Shoguchi E.

Genome Biol Evol. 2014 May 31;6(6):1408-22. doi: 10.1093/gbe/evu109.

30.

Intestinal carriage of methicillin-resistant Staphylococcus aureus in nasal MRSA carriers hospitalized in the neonatal intensive care unit.

Nakao A, Ito T, Han X, Lu YJ, Hisata K, Tsujiwaki A, Matsunaga N, Komatsu M, Hiramatsu K, Shimizu T.

Antimicrob Resist Infect Control. 2014 Apr 23;3:14. doi: 10.1186/2047-2994-3-14. eCollection 2014.

31.

Oxidative stress early in infancy and neurodevelopmental outcome in very low-birthweight infants.

Shoji H, Ikeda N, Hosozawa M, Ohkawa N, Matsunaga N, Suganuma H, Hisata K, Tanaka K, Shimizu T.

Pediatr Int. 2014 Oct;56(5):709-13. doi: 10.1111/ped.12332. Epub 2014 Jun 17.

PMID:
24617865
32.

The clinical utility of a near patient care rapid microarray-based diagnostic test for influenza and respiratory syncytial virus infections in the pediatric setting.

Nakao A, Hisata K, Matsunaga N, Fujimori M, Yoshikawa N, Komatsu M, Kikuchi K, Takahashi H, Shimizu T.

Diagn Microbiol Infect Dis. 2014 Apr;78(4):363-7. doi: 10.1016/j.diagmicrobio.2013.11.005. Epub 2013 Nov 15.

PMID:
24582577
33.

MarinegenomicsDB: an integrated genome viewer for community-based annotation of genomes.

Koyanagi R, Takeuchi T, Hisata K, Gyoja F, Shoguchi E, Satoh N, Kawashima T.

Zoolog Sci. 2013 Oct;30(10):797-800. doi: 10.2108/zsj.30.797.

PMID:
24125644
34.

Lipid profile and atherogenic indices soon after birth in Japanese preterm infants.

Shoji H, Murano Y, Mori M, Matsunaga N, Ohkawa N, Suganuma H, Ikeno M, Hisata K, Hirayama S, Ueno T, Miida T, Shimizu T.

Acta Paediatr. 2014 Jan;103(1):22-6. doi: 10.1111/apa.12436. Epub 2013 Nov 9.

PMID:
24117869
35.

Draft assembly of the Symbiodinium minutum nuclear genome reveals dinoflagellate gene structure.

Shoguchi E, Shinzato C, Kawashima T, Gyoja F, Mungpakdee S, Koyanagi R, Takeuchi T, Hisata K, Tanaka M, Fujiwara M, Hamada M, Seidi A, Fujie M, Usami T, Goto H, Yamasaki S, Arakaki N, Suzuki Y, Sugano S, Toyoda A, Kuroki Y, Fujiyama A, Medina M, Coffroth MA, Bhattacharya D, Satoh N.

Curr Biol. 2013 Aug 5;23(15):1399-408. doi: 10.1016/j.cub.2013.05.062. Epub 2013 Jul 11.

36.

Whole-exome sequencing of a unique brain malformation with periventricular heterotopia, cingulate polymicrogyria and midbrain tectal hyperplasia.

Okumura A, Hayashi M, Shimojima K, Ikeno M, Uchida T, Takanashi J, Okamoto N, Hisata K, Shoji H, Saito A, Furukawa T, Kishida T, Shimizu T, Yamamoto T.

Neuropathology. 2013 Oct;33(5):553-60. doi: 10.1111/neup.12007. Epub 2012 Dec 13.

PMID:
23240987
37.

Subtelomeric deletions of 1q43q44 and severe brain impairment associated with delayed myelination.

Shimojima K, Okamoto N, Suzuki Y, Saito M, Mori M, Yamagata T, Momoi MY, Hattori H, Okano Y, Hisata K, Okumura A, Yamamoto T.

J Hum Genet. 2012 Sep;57(9):593-600. doi: 10.1038/jhg.2012.77. Epub 2012 Jun 21.

PMID:
22718018
38.

The pilot study: sphingomyelin-fortified milk has a positive association with the neurobehavioural development of very low birth weight infants during infancy, randomized control trial.

Tanaka K, Hosozawa M, Kudo N, Yoshikawa N, Hisata K, Shoji H, Shinohara K, Shimizu T.

Brain Dev. 2013 Jan;35(1):45-52. doi: 10.1016/j.braindev.2012.03.004. Epub 2012 May 24.

PMID:
22633446
39.

Glucose metabolism soon after birth in very premature infants with small- and appropriate-for-gestational-age birth weights.

Tsubahara M, Shoji H, Mori M, Matsunaga N, Ikeno M, Hisata K, Okumura A, Shimizu T.

Early Hum Dev. 2012 Sep;88(9):735-8. doi: 10.1016/j.earlhumdev.2012.03.003. Epub 2012 Apr 12.

PMID:
22503438
40.

A severe form of epidermal nevus syndrome associated with brainstem and cerebellar malformations and neonatal medulloblastoma.

Okumura A, Lee T, Ikeno M, Shimojima K, Kajino K, Inoue Y, Yoshikawa N, Suganuma H, Suzuki M, Hisata K, Shoji H, Takanashi J, Barkovich AJ, Shimizu T, Yamamoto T, Hayashi M.

Brain Dev. 2012 Nov;34(10):881-5. doi: 10.1016/j.braindev.2012.03.003. Epub 2012 Apr 7.

PMID:
22483529
41.

Detection of antibodies against the non-calcium-dependent epitopes of desmoglein 3 in pemphigus vulgaris and their pathogenic significance.

Kamiya K, Aoyama Y, Shirafuji Y, Hamada T, Morizane S, Fujii K, Hisata K, Iwatsuki K.

Br J Dermatol. 2012 Aug;167(2):252-61. doi: 10.1111/j.1365-2133.2012.10929.x. Epub 2012 Jun 11.

42.

Draft genome of the pearl oyster Pinctada fucata: a platform for understanding bivalve biology.

Takeuchi T, Kawashima T, Koyanagi R, Gyoja F, Tanaka M, Ikuta T, Shoguchi E, Fujiwara M, Shinzato C, Hisata K, Fujie M, Usami T, Nagai K, Maeyama K, Okamoto K, Aoki H, Ishikawa T, Masaoka T, Fujiwara A, Endo K, Endo H, Nagasawa H, Kinoshita S, Asakawa S, Watabe S, Satoh N.

DNA Res. 2012 Apr;19(2):117-30. doi: 10.1093/dnares/dss005. Epub 2012 Feb 6.

43.

Using the Acropora digitifera genome to understand coral responses to environmental change.

Shinzato C, Shoguchi E, Kawashima T, Hamada M, Hisata K, Tanaka M, Fujie M, Fujiwara M, Koyanagi R, Ikuta T, Fujiyama A, Miller DJ, Satoh N.

Nature. 2011 Jul 24;476(7360):320-3. doi: 10.1038/nature10249.

PMID:
21785439
44.

[Community-associated MRSA: current status and molecular epidemiological perspective].

Ito T, Kuwahara K, Hisata K, Okuma K, Cui L, Hiramatsu K.

Kansenshogaku Zasshi. 2010 Sep;84(5 Suppl 1):23-33. Review. Japanese. No abstract available.

PMID:
21656990
45.

Effects of parenteral soybean oil lipid emulsion on the long-chain polyunsaturated fatty acid profile in very-low-birth-weight infants.

Shoji H, Hisata K, Suzuki M, Yoshikawa N, Suganuma H, Ohkawa N, Shimizu T.

Acta Paediatr. 2011 Jul;100(7):972-6. doi: 10.1111/j.1651-2227.2011.02183.x. Epub 2011 Mar 3.

46.

Dissemination of multiple MRSA clones among community-associated methicillin-resistant Staphylococcus aureus infections from Japanese children with impetigo.

Hisata K, Ito T, Matsunaga N, Komatsu M, Jin J, Li S, Watanabe S, Shimizu T, Hiramatsu K.

J Infect Chemother. 2011 Oct;17(5):609-21. doi: 10.1007/s10156-011-0223-4. Epub 2011 Feb 17.

PMID:
21327935
47.

Efficacy of bacterial ribosomal RNA-targeted reverse transcription-quantitative PCR for detecting neonatal sepsis: a case control study.

Fujimori M, Hisata K, Nagata S, Matsunaga N, Komatsu M, Shoji H, Sato H, Yamashiro Y, Asahara T, Nomoto K, Shimizu T.

BMC Pediatr. 2010 Jul 29;10:53. doi: 10.1186/1471-2431-10-53.

48.

Association between iron status and neurodevelopmental outcomes among VLBW infants.

Kon N, Tanaka K, Sekigawa M, Negishi Y, Yoshikawa N, Hisata K, Shoji H, Shimizu T.

Brain Dev. 2010 Nov;32(10):849-54. doi: 10.1016/j.braindev.2009.12.003. Epub 2010 Apr 24.

PMID:
20456882
49.

Effects of early enteral feeding on fecal elastase 1 and plasma secretin.

Kaneko N, Hisata K, Shoji H, Tanaka K, Nakazawa T, Shimizu T.

Pediatr Int. 2010 Aug;52(4):607-10. doi: 10.1111/j.1442-200X.2010.03125.x.

PMID:
20337981
50.

Phenotypic overlapping of trisomy 12p and Pallister-Killian syndrome.

Inage E, Suzuki M, Minowa K, Akimoto N, Hisata K, Shoji H, Okumura A, Shimojima K, Shimizu T, Yamamoto T.

Eur J Med Genet. 2010 May-Jun;53(3):159-61. doi: 10.1016/j.ejmg.2010.02.009. Epub 2010 Feb 26.

PMID:
20219705

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