Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 10

1.

Global identification of functional microRNA-mRNA interactions in Drosophila.

Wessels HH, Lebedeva S, Hirsekorn A, Wurmus R, Akalin A, Mukherjee N, Ohler U.

Nat Commun. 2019 Apr 9;10(1):1626. doi: 10.1038/s41467-019-09586-z.

2.

Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling.

Karabacak Calviello A, Hirsekorn A, Wurmus R, Yusuf D, Ohler U.

Genome Biol. 2019 Feb 21;20(1):42. doi: 10.1186/s13059-019-1654-y.

3.

Determinants of promoter and enhancer transcription directionality in metazoans.

Ibrahim MM, Karabacak A, Glahs A, Kolundzic E, Hirsekorn A, Carda A, Tursun B, Zinzen RP, Lacadie SA, Ohler U.

Nat Commun. 2018 Oct 26;9(1):4472. doi: 10.1038/s41467-018-06962-z.

4.

FACT Sets a Barrier for Cell Fate Reprogramming in Caenorhabditis elegans and Human Cells.

Kolundzic E, Ofenbauer A, Bulut SI, Uyar B, Baytek G, Sommermeier A, Seelk S, He M, Hirsekorn A, Vucicevic D, Akalin A, Diecke S, Lacadie SA, Tursun B.

Dev Cell. 2018 Sep 10;46(5):611-626.e12. doi: 10.1016/j.devcel.2018.07.006. Epub 2018 Aug 2.

5.

A Multi-step Transcriptional and Chromatin State Cascade Underlies Motor Neuron Programming from Embryonic Stem Cells.

Velasco S, Ibrahim MM, Kakumanu A, Garipler G, Aydin B, Al-Sayegh MA, Hirsekorn A, Abdul-Rahman F, Satija R, Ohler U, Mahony S, Mazzoni EO.

Cell Stem Cell. 2017 Feb 2;20(2):205-217.e8. doi: 10.1016/j.stem.2016.11.006. Epub 2016 Dec 8.

6.

Integrative classification of human coding and noncoding genes through RNA metabolism profiles.

Mukherjee N, Calviello L, Hirsekorn A, de Pretis S, Pelizzola M, Ohler U.

Nat Struct Mol Biol. 2017 Jan;24(1):86-96. doi: 10.1038/nsmb.3325. Epub 2016 Nov 21.

PMID:
27870833
7.

Detecting actively translated open reading frames in ribosome profiling data.

Calviello L, Mukherjee N, Wyler E, Zauber H, Hirsekorn A, Selbach M, Landthaler M, Obermayer B, Ohler U.

Nat Methods. 2016 Feb;13(2):165-70. doi: 10.1038/nmeth.3688. Epub 2015 Dec 14.

PMID:
26657557
8.

Identifying RBP Targets with RIP-seq.

Wessels HH, Hirsekorn A, Ohler U, Mukherjee N.

Methods Mol Biol. 2016;1358:141-52. doi: 10.1007/978-1-4939-3067-8_9.

PMID:
26463382
9.

Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus.

Baskaran P, Rödelsperger C, Prabh N, Serobyan V, Markov GV, Hirsekorn A, Dieterich C.

BMC Evol Biol. 2015 Sep 15;15:185. doi: 10.1186/s12862-015-0466-2.

10.

A novel neurotransmitter-independent communication pathway between axons and glial cells.

Hartl S, Heil JE, Hirsekorn A, Lohr C.

Eur J Neurosci. 2007 Feb;25(4):945-56.

PMID:
17331192

Supplemental Content

Loading ...
Support Center