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Exopolysaccharide production in Ensifer meliloti laboratory and native strains and their effects on alfalfa inoculation.

Primo ED, Cossovich S, Nievas F, Bogino P, Humm EA, Hirsch AM, Giordano W.

Arch Microbiol. 2019 Nov 3. doi: 10.1007/s00203-019-01756-3. [Epub ahead of print]


Trinickia dabaoshanensis sp. nov., a new name for a lost species.

Estrada-de Los Santos P, Palmer M, Steenkamp ET, Maluk M, Beukes C, Hirsch AM, James EK, Venter SN.

Arch Microbiol. 2019 Nov;201(9):1313-1316. doi: 10.1007/s00203-019-01703-2. Epub 2019 Jul 11.


Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources.

Rojas-Rojas FU, Sánchez-López D, Tapia-García EY, Arroyo-Herrera I, Maymon M, Humm E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Ivanova N, Kyrpides N, Woyke T, Shapiro N, Hirsch AM, Ibarra JA, Estrada-de Los Santos P.

Curr Microbiol. 2019 May;76(5):566-574. doi: 10.1007/s00284-019-01657-0. Epub 2019 Feb 28.


Serial imaging after pulmonary embolism and correlation with functional limitation at 12 months: Results of the ELOPE Study.

Ma KA, Kahn SR, Akaberi A, Dennie C, Rush C, Granton JT, Anderson D, Wells PS, Rodger MA, Solymoss S, Kovacs MJ, Rudski L, Shimony A, Hernandez P, Aaron SD, Pena E, Abikhzer G, Hirsch AM; ELOPE Study group.

Res Pract Thromb Haemost. 2018 Jun 17;2(4):670-677. doi: 10.1002/rth2.12123. eCollection 2018 Oct.


Antifungal Activity of Bacillus Species Against Fusarium and Analysis of the Potential Mechanisms Used in Biocontrol.

Khan N, Martínez-Hidalgo P, Ice TA, Maymon M, Humm EA, Nejat N, Sanders ER, Kaplan D, Hirsch AM.

Front Microbiol. 2018 Oct 2;9:2363. doi: 10.3389/fmicb.2018.02363. eCollection 2018.


Engineering root microbiomes for healthier crops and soils using beneficial, environmentally safe bacteria.

Martínez-Hidalgo P, Maymon M, Pule-Meulenberg F, Hirsch AM.

Can J Microbiol. 2019 Feb;65(2):91-104. doi: 10.1139/cjm-2018-0315. Epub 2018 Sep 18. Review.


Cell Autoaggregation, Biofilm Formation, and Plant Attachment in a Sinorhizobium meliloti lpsB Mutant.

Sorroche F, Bogino P, Russo DM, Zorreguieta A, Nievas F, Morales GM, Hirsch AM, Giordano W.

Mol Plant Microbe Interact. 2018 Oct;31(10):1075-1082. doi: 10.1094/MPMI-01-18-0004-R. Epub 2018 Aug 20.


Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae.

Estrada-de Los Santos P, Palmer M, Chávez-Ramírez B, Beukes C, Steenkamp ET, Briscoe L, Khan N, Maluk M, Lafos M, Humm E, Arrabit M, Crook M, Gross E, Simon MF, Dos Reis Junior FB, Whitman WB, Shapiro N, Poole PS, Hirsch AM, Venter SN, James EK.

Genes (Basel). 2018 Aug 1;9(8). pii: E389. doi: 10.3390/genes9080389.


Broad-spectrum antimicrobial activity by Burkholderia cenocepacia TAtl-371, a strain isolated from the tomato rhizosphere.

Rojas-Rojas FU, Salazar-Gómez A, Vargas-Díaz ME, Vásquez-Murrieta MS, Hirsch AM, De Mot R, Ghequire MGK, Ibarra JA, Estrada-de Los Santos P.

Microbiology. 2018 Sep;164(9):1072-1086. doi: 10.1099/mic.0.000675. Epub 2018 Jul 20.


Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium.

Rojas-Rojas FU, Tapia-García EY, Maymon M, Humm E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Shapiro N, Hirsch AM, Estrada-de Los Santos P.

Stand Genomic Sci. 2017 Dec 16;12:80. doi: 10.1186/s40793-017-0294-7. eCollection 2017.


Combating Fusarium Infection Using Bacillus-Based Antimicrobials.

Khan N, Maymon M, Hirsch AM.

Microorganisms. 2017 Nov 22;5(4). pii: E75. doi: 10.3390/microorganisms5040075. Review.


Monitoring the colonization and infection of legume nodules by Micromonospora in co-inoculation experiments with rhizobia.

Benito P, Alonso-Vega P, Aguado C, Luján R, Anzai Y, Hirsch AM, Trujillo ME.

Sci Rep. 2017 Sep 8;7(1):11051. doi: 10.1038/s41598-017-11428-1.


Chitinase-producing bacteria and their role in biocontrol.

Veliz EA, Martínez-Hidalgo P, Hirsch AM.

AIMS Microbiol. 2017 Aug 4;3(3):689-705. doi: 10.3934/microbiol.2017.3.689. eCollection 2017. Review.


Right ventricular ST-elevation myocardial infarction as a cause of death in idiopathic pulmonary arterial hypertension.

Zhan Y, Burstein B, Abualsaud AO, Nosair M, Hirsch AM, Lesenko L, Langleben D.

Pulm Circ. 2017 Apr-Jun;7(2):555-558. doi: 10.1177/2045893217704435. Epub 2017 May 12.


Quality of Life, Dyspnea, and Functional Exercise Capacity Following a First Episode of Pulmonary Embolism: Results of the ELOPE Cohort Study.

Kahn SR, Akaberi A, Granton JT, Anderson DR, Wells PS, Rodger MA, Solymoss S, Kovacs MJ, Rudski L, Shimony A, Dennie C, Rush C, Hernandez P, Aaron SD, Hirsch AM.

Am J Med. 2017 Aug;130(8):990.e9-990.e21. doi: 10.1016/j.amjmed.2017.03.033. Epub 2017 Apr 8.


N-terminal of prohormone brain natriuretic peptide predicts functional limitation one year following pulmonary embolism: Results from the ELOPE study.

Ma K, Kahn SR, Hirsch AM, Akaberi A, Anderson DR, Wells PS, Rodger M, Solymoss S, Kovacs MJ, Rudski L, Shimony A, Dennie C, Rush C, Hernandez P, Aaron SD, Granton JT.

Thromb Res. 2017 May;153:47-49. doi: 10.1016/j.thromres.2017.03.005. Epub 2017 Mar 8. No abstract available.


Disease Progression-Dependent Effects of TREM2 Deficiency in a Mouse Model of Alzheimer's Disease.

Jay TR, Hirsch AM, Broihier ML, Miller CM, Neilson LE, Ransohoff RM, Lamb BT, Landreth GE.

J Neurosci. 2017 Jan 18;37(3):637-647. doi: 10.1523/JNEUROSCI.2110-16.2016.


Blue light does not inhibit nodulation in Sesbania rostrata.

Shimomura A, Arima S, Hayashi M, Maymon M, Hirsch AM, Suzuki A.

Plant Signal Behav. 2017 Jan 2;12(1):e1268313. doi: 10.1080/15592324.2016.1268313.


Functional and Exercise Limitations After a First Episode of Pulmonary Embolism: Results of the ELOPE Prospective Cohort Study.

Kahn SR, Hirsch AM, Akaberi A, Hernandez P, Anderson DR, Wells PS, Rodger MA, Solymoss S, Kovacs MJ, Rudski L, Shimony A, Dennie C, Rush C, Geerts WH, Aaron SD, Granton JT.

Chest. 2017 May;151(5):1058-1068. doi: 10.1016/j.chest.2016.11.030. Epub 2016 Dec 6.


Blue Light Perception by Both Roots and Rhizobia Inhibits Nodule Formation in Lotus japonicus.

Shimomura A, Naka A, Miyazaki N, Moriuchi S, Arima S, Sato S, Hirakawa H, Hayashi M, Maymon M, Hirsch AM, Suzuki A.

Mol Plant Microbe Interact. 2016 Oct;29(10):786-796. Epub 2016 Oct 21.


Pregnancy as a possible trigger for heritable pulmonary arterial hypertension.

Limoges M, Langleben D, Fox BD, Shear R, Wieczorek P, Rudski LG, Hirsch AM, Schlesinger RD, Lesenko L.

Pulm Circ. 2016 Sep;6(3):381-3. doi: 10.1086/686993.


Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.

De Meyer SE, Briscoe L, Martínez-Hidalgo P, Agapakis CM, de-Los Santos PE, Seshadri R, Reeve W, Weinstock G, O'Hara G, Howieson JG, Hirsch AM.

Mol Plant Microbe Interact. 2016 Aug;29(8):609-19. doi: 10.1094/MPMI-05-16-0091-R. Epub 2016 Jun 30.


Enhanced hyphal growth of arbuscular mycorrhizae by root exudates derived from high R/FR treated Lotus japonicus.

Nagata M, Yamamoto N, Miyamoto T, Shimomura A, Arima S, Hirsch AM, Suzuki A.

Plant Signal Behav. 2016 Jun 2;11(6):e1187356. doi: 10.1080/15592324.2016.1187356.


Mining the phytomicrobiome to understand how bacterial coinoculations enhance plant growth.

Maymon M, Martínez-Hidalgo P, Tran SS, Ice T, Craemer K, Anbarchian T, Sung T, Hwang LH, Chou M, Fujishige NA, Villella W, Ventosa J, Sikorski J, Sanders ER, Faull KF, Hirsch AM.

Front Plant Sci. 2015 Sep 24;6:784. doi: 10.3389/fpls.2015.00784. eCollection 2015.


Red/Far Red Light Controls Arbuscular Mycorrhizal Colonization via Jasmonic Acid and Strigolactone Signaling.

Nagata M, Yamamoto N, Shigeyama T, Terasawa Y, Anai T, Sakai T, Inada S, Arima S, Hashiguchi M, Akashi R, Nakayama H, Ueno D, Hirsch AM, Suzuki A.

Plant Cell Physiol. 2015 Nov;56(11):2100-9. doi: 10.1093/pcp/pcv135. Epub 2015 Sep 26.


A reliable method for the selection and confirmation of transconjugants of plant growth-promoting bacteria especially plant-associated Burkholderia spp.

Tariq M, Lum MR, Chong AW, Amirapu AB, Hameed S, Hirsch AM.

J Microbiol Methods. 2015 Oct;117:49-53. doi: 10.1016/j.mimet.2015.07.008. Epub 2015 Jul 14.


Implementation of a targeted screening program to detect airflow obstruction suggestive of chronic obstructive pulmonary disease within a presurgical screening clinic.

Robitaille C, Dajczman E, Hirsch AM, Small D, Ernst P, Porubska D, Palayew M.

Can Respir J. 2015 Jul-Aug;22(4):209-14. Epub 2015 May 11.


Biofilm formation assessment in Sinorhizobium meliloti reveals interlinked control with surface motility.

Amaya-Gómez CV, Hirsch AM, Soto MJ.

BMC Microbiol. 2015 Mar 3;15:58. doi: 10.1186/s12866-015-0390-z.


DNA-Based Authentication of Botanicals and Plant-Derived Dietary Supplements: Where Have We Been and Where Are We Going?

Coutinho Moraes DF, Still DW, Lum MR, Hirsch AM.

Planta Med. 2015 Jun;81(9):687-95. doi: 10.1055/s-0035-1545843. Epub 2015 Apr 9. Review.


Acute vasodilator responsiveness and microvascular recruitment in idiopathic pulmonary arterial hypertension.

Langleben D, Orfanos SE, Giovinazzo M, Schlesinger RD, Hirsch AM, Blenkhorn F, Lesenko L, Armaganidis A, Catravas JD.

Ann Intern Med. 2015 Jan 20;162(2):154-6. doi: 10.7326/M14-1402. No abstract available.


Immersing undergraduate students into research on the metagenomics of the plant rhizosphere: a pedagogical strategy to engage civic-mindedness and retain undergraduates in STEM.

Sanders ER, Hirsch AM.

Front Plant Sci. 2014 Apr 30;5:157. doi: 10.3389/fpls.2014.00157. eCollection 2014. No abstract available.


Plant-associated symbiotic Burkholderia species lack hallmark strategies required in mammalian pathogenesis.

Angus AA, Agapakis CM, Fong S, Yerrapragada S, Estrada-de los Santos P, Yang P, Song N, Kano S, Caballero-Mellado J, de Faria SM, Dakora FD, Weinstock G, Hirsch AM.

PLoS One. 2014 Jan 8;9(1):e83779. doi: 10.1371/journal.pone.0083779. eCollection 2014.


Integrated interdisciplinary care for patients with chronic obstructive pulmonary disease reduces emergency department visits, admissions and costs: a quality assurance study.

Dajczman E, Robitaille C, Ernst P, Hirsch AM, Wolkove N, Small D, Bianco J, Stern H, Palayew M.

Can Respir J. 2013 Sep-Oct;20(5):351-6.


Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules.

Hirsch AM, Alvarado J, Bruce D, Chertkov O, De Hoff PL, Detter JC, Fujishige NA, Goodwin LA, Han J, Han S, Ivanova N, Land ML, Lum MR, Milani-Nejad N, Nolan M, Pati A, Pitluck S, Tran SS, Woyke T, Valdés M.

Genome Announc. 2013 Sep 26;1(5). pii: e00759-13. doi: 10.1128/genomeA.00759-13.


Burkholderia caballeronis sp. nov., a nitrogen fixing species isolated from tomato (Lycopersicon esculentum) with the ability to effectively nodulate Phaseolus vulgaris.

Martínez-Aguilar L, Salazar-Salazar C, Méndez RD, Caballero-Mellado J, Hirsch AM, Vásquez-Murrieta MS, Estrada-de los Santos P.

Antonie Van Leeuwenhoek. 2013 Dec;104(6):1063-71. doi: 10.1007/s10482-013-0028-9. Epub 2013 Sep 22.


Phylogenetic analysis of burkholderia species by multilocus sequence analysis.

Estrada-de los Santos P, Vinuesa P, Martínez-Aguilar L, Hirsch AM, Caballero-Mellado J.

Curr Microbiol. 2013 Jul;67(1):51-60. doi: 10.1007/s00284-013-0330-9. Epub 2013 Feb 13.


Role of Rhizobium endoglucanase CelC2 in cellulose biosynthesis and biofilm formation on plant roots and abiotic surfaces.

Robledo M, Rivera L, Jiménez-Zurdo JI, Rivas R, Dazzo F, Velázquez E, Martínez-Molina E, Hirsch AM, Mateos PF.

Microb Cell Fact. 2012 Sep 12;11:125. doi: 10.1186/1475-2859-11-125.


Hemodynamic stability after transitioning between endothelin receptor antagonists in patients with pulmonary arterial hypertension.

Fox B, Langleben D, Hirsch AM, Schlesinger RD, Eisenberg MJ, Joyal D, Blenkhorn F, Lesenko L.

Can J Cardiol. 2013 Jun;29(6):672-7. doi: 10.1016/j.cjca.2012.05.013. Epub 2012 Jul 21.


Additional cause for reduced JA-Ile in the root of a Lotus japonicus phyB mutant.

Shigeyama T, Tominaga A, Arima S, Sakai T, Inada S, Jikumaru Y, Kamiya Y, Uchiumi T, Abe M, Hashiguchi M, Akashi R, Hirsch AM, Suzuki A.

Plant Signal Behav. 2012 Jul;7(7):746-8. doi: 10.4161/psb.20407. Epub 2012 Jul 1.


Lotus japonicus nodulation is photomorphogenetically controlled by sensing the red/far red (R/FR) ratio through jasmonic acid (JA) signaling.

Suzuki A, Suriyagoda L, Shigeyama T, Tominaga A, Sasaki M, Hiratsuka Y, Yoshinaga A, Arima S, Agarie S, Sakai T, Inada S, Jikumaru Y, Kamiya Y, Uchiumi T, Abe M, Hashiguchi M, Akashi R, Sato S, Kaneko T, Tabata S, Hirsch AM.

Proc Natl Acad Sci U S A. 2011 Oct 4;108(40):16837-42. doi: 10.1073/pnas.1105892108. Epub 2011 Sep 19.


Legume-nodulating betaproteobacteria: diversity, host range, and future prospects.

Gyaneshwar P, Hirsch AM, Moulin L, Chen WM, Elliott GN, Bontemps C, Estrada-de Los Santos P, Gross E, Dos Reis FB, Sprent JI, Young JP, James EK.

Mol Plant Microbe Interact. 2011 Nov;24(11):1276-88. doi: 10.1094/MPMI-06-11-0172. Review.


Report of survey results for newly licensed registered nurses in Washington state.

Hirsch AM.

J Nurs Educ. 2011 Oct;50(10):575-8. doi: 10.3928/01484834-20110616-01. Epub 2011 Jun 16.


Diagnostic evaluation and management of chronic thromboembolic pulmonary hypertension: a clinical practice guideline.

Mehta S, Helmersen D, Provencher S, Hirani N, Rubens FD, De Perrot M, Blostein M, Boutet K, Chandy G, Dennie C, Granton J, Hernandez P, Hirsch AM, Laframboise K, Levy RD, Lien D, Martel S, Shoemaker G, Swiston J, Weinkauf J; Canadian Thoracic Society Pulmonary Vascular Disease - CTEPH CPG Development Committee; Canadian Thoracic Society Canadian Respiratory Guidelines Committee.

Can Respir J. 2010 Nov-Dec;17(6):301-34.


Six-month exercise training program to treat post-thrombotic syndrome: a randomized controlled two-centre trial.

Kahn SR, Shrier I, Shapiro S, Houweling AH, Hirsch AM, Reid RD, Kearon C, Rabhi K, Rodger MA, Kovacs MJ, Anderson DR, Wells PS.

CMAJ. 2011 Jan 11;183(1):37-44. doi: 10.1503/cmaj.100248. Epub 2010 Nov 22.


A SUMO-Groucho Q domain fusion protein: characterization and in vivo Ulp1-mediated cleavage.

Kuo D, Nie M, De Hoff P, Chambers M, Phillips M, Hirsch AM, Courey AJ.

Protein Expr Purif. 2011 Mar;76(1):65-71. doi: 10.1016/j.pep.2010.08.008. Epub 2010 Aug 21.


An open-flower mutant of Melilotus alba: Potential for floral-dip transformation of a papilionoid legume with a short life cycle?

Hirsch AM, Lee A, Deng W, Tucker SC.

Am J Bot. 2010 Mar;97(3):395-404. doi: 10.3732/ajb.0900152. Epub 2010 Feb 5.


Insights into the history of the legume-betaproteobacterial symbiosis.

Angus AA, Hirsch AM.

Mol Ecol. 2010 Jan;19(1):28-30. doi: 10.1111/j.1365-294X.2009.04459.x.


Enhanced nodulation and nitrogen fixation in the abscisic acid low-sensitive mutant enhanced nitrogen fixation1 of Lotus japonicus.

Tominaga A, Nagata M, Futsuki K, Abe H, Uchiumi T, Abe M, Kucho K, Hashiguchi M, Akashi R, Hirsch AM, Arima S, Suzuki A.

Plant Physiol. 2009 Dec;151(4):1965-76. doi: 10.1104/pp.109.142638. Epub 2009 Sep 23.


Plant lectins: the ties that bind in root symbiosis and plant defense.

De Hoff PL, Brill LM, Hirsch AM.

Mol Genet Genomics. 2009 Jul;282(1):1-15. doi: 10.1007/s00438-009-0460-8. Epub 2009 Jun 2. Review.

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