Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 45

1.

Genomic resources for the study of echinoderm development and evolution.

Cary GA, Cameron RA, Hinman VF.

Methods Cell Biol. 2019;151:65-88. doi: 10.1016/bs.mcb.2018.11.019. Epub 2019 Jan 9. Review.

PMID:
30948032
2.

Analysis of sea star larval regeneration reveals conserved processes of whole-body regeneration across the metazoa.

Cary GA, Wolff A, Zueva O, Pattinato J, Hinman VF.

BMC Biol. 2019 Feb 22;17(1):16. doi: 10.1186/s12915-019-0633-9.

3.

EchinoBase: Tools for Echinoderm Genome Analyses.

Cary GA, Cameron RA, Hinman VF.

Methods Mol Biol. 2018;1757:349-369. doi: 10.1007/978-1-4939-7737-6_12.

PMID:
29761464
4.

Embryonic neurogenesis in echinoderms.

Hinman VF, Burke RD.

Wiley Interdiscip Rev Dev Biol. 2018 Jul;7(4):e316. doi: 10.1002/wdev.316. Epub 2018 Feb 22. Review.

PMID:
29470839
5.

Regulatory heterochronies and loose temporal scaling between sea star and sea urchin regulatory circuits.

Gildor T, Hinman V, Ben-Tabou-De-Leon S.

Int J Dev Biol. 2017;61(3-4-5):347-356. doi: 10.1387/ijdb.160331sb.

6.

Genome-wide use of high- and low-affinity Tbrain transcription factor binding sites during echinoderm development.

Cary GA, Cheatle Jarvela AM, Francolini RD, Hinman VF.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5854-5861. doi: 10.1073/pnas.1610611114.

7.

Paleogenomics of echinoids reveals an ancient origin for the double-negative specification of micromeres in sea urchins.

Thompson JR, Erkenbrack EM, Hinman VF, McCauley BS, Petsios E, Bottjer DJ.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5870-5877. doi: 10.1073/pnas.1610603114.

8.

The evolution of gene regulation.

Hinman V, Cary G.

Elife. 2017 May 12;6. pii: e27291. doi: 10.7554/eLife.27291.

9.

Echinoderm development and evolution in the post-genomic era.

Cary GA, Hinman VF.

Dev Biol. 2017 Jul 15;427(2):203-211. doi: 10.1016/j.ydbio.2017.02.003. Epub 2017 Feb 7. Review.

10.

A gene regulatory network for apical organ neurogenesis and its spatial control in sea star embryos.

Cheatle Jarvela AM, Yankura KA, Hinman VF.

Development. 2016 Nov 15;143(22):4214-4223. Epub 2016 Oct 5.

11.

Eric Davidson (1937-2015) and the past, present and future of EvoDevo.

Hinman V.

Evol Dev. 2016 Mar-Apr;18(2):67-8. doi: 10.1111/ede.12180. Epub 2016 Jan 13. No abstract available.

PMID:
26766743
12.

Unraveling the Tangled Skein: The Evolution of Transcriptional Regulatory Networks in Development.

Rebeiz M, Patel NH, Hinman VF.

Annu Rev Genomics Hum Genet. 2015;16:103-31. doi: 10.1146/annurev-genom-091212-153423. Epub 2015 May 20. Review.

13.

Evolution of transcription factor function as a mechanism for changing metazoan developmental gene regulatory networks.

Cheatle Jarvela AM, Hinman VF.

Evodevo. 2015 Jan 29;6(1):3. doi: 10.1186/2041-9139-6-3. eCollection 2015. Review.

14.

Dose-dependent nuclear β-catenin response segregates endomesoderm along the sea star primary axis.

McCauley BS, Akyar E, Saad HR, Hinman VF.

Development. 2015 Jan 1;142(1):207-17. doi: 10.1242/dev.113043.

15.

A method for microinjection of Patiria miniata zygotes.

Cheatle Jarvela AM, Hinman V.

J Vis Exp. 2014 Sep 1;(91):e51913. doi: 10.3791/51913.

16.

Modular evolution of DNA-binding preference of a Tbrain transcription factor provides a mechanism for modifying gene regulatory networks.

Cheatle Jarvela AM, Brubaker L, Vedenko A, Gupta A, Armitage BA, Bulyk ML, Hinman VF.

Mol Biol Evol. 2014 Oct;31(10):2672-88. doi: 10.1093/molbev/msu213. Epub 2014 Jul 12.

17.

Developmental gene regulatory network evolution: insights from comparative studies in echinoderms.

Hinman VF, Cheatle Jarvela AM.

Genesis. 2014 Mar;52(3):193-207. doi: 10.1002/dvg.22757. Epub 2014 Mar 6. Review.

PMID:
24549884
18.

Expression of wnt and frizzled genes during early sea star development.

McCauley BS, Akyar E, Filliger L, Hinman VF.

Gene Expr Patterns. 2013 Dec;13(8):437-44. doi: 10.1016/j.gep.2013.07.007. Epub 2013 Jul 27.

PMID:
23899422
19.

Gene regulatory network for neurogenesis in a sea star embryo connects broad neural specification and localized patterning.

Yankura KA, Koechlein CS, Cryan AF, Cheatle A, Hinman VF.

Proc Natl Acad Sci U S A. 2013 May 21;110(21):8591-6. doi: 10.1073/pnas.1220903110. Epub 2013 May 6.

20.

Probabilistic error correction for RNA sequencing.

Le HS, Schulz MH, McCauley BM, Hinman VF, Bar-Joseph Z.

Nucleic Acids Res. 2013 May 1;41(10):e109. doi: 10.1093/nar/gkt215. Epub 2013 Apr 4.

21.
22.

RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star.

Kadri S, Hinman VF, Benos PV.

PLoS One. 2011;6(12):e29217. doi: 10.1371/journal.pone.0029217. Epub 2011 Dec 28.

23.

Uncoupling of complex regulatory patterning during evolution of larval development in echinoderms.

Yankura KA, Martik ML, Jennings CK, Hinman VF.

BMC Biol. 2010 Nov 30;8:143. doi: 10.1186/1741-7007-8-143.

24.

A conserved gene regulatory network subcircuit drives different developmental fates in the vegetal pole of highly divergent echinoderm embryos.

McCauley BS, Weideman EP, Hinman VF.

Dev Biol. 2010 Apr 15;340(2):200-8. doi: 10.1016/j.ydbio.2009.11.020. Epub 2009 Nov 23.

25.

Evolution of gene regulatory network architectures: examples of subcircuit conservation and plasticity between classes of echinoderms.

Hinman VF, Yankura KA, McCauley BS.

Biochim Biophys Acta. 2009 Apr;1789(4):326-32. doi: 10.1016/j.bbagrm.2009.01.004. Epub 2009 Jan 22. Review.

PMID:
19284985
26.

HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models.

Kadri S, Hinman V, Benos PV.

BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S35. doi: 10.1186/1471-2105-10-S1-S35.

27.

Evolutionary plasticity of developmental gene regulatory network architecture.

Hinman VF, Davidson EH.

Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19404-9. Epub 2007 Nov 27.

28.
29.

Developmental expression of transcription factor genes in a demosponge: insights into the origin of metazoan multicellularity.

Larroux C, Fahey B, Liubicich D, Hinman VF, Gauthier M, Gongora M, Green K, Wörheide G, Leys SP, Degnan BM.

Evol Dev. 2006 Mar-Apr;8(2):150-73.

PMID:
16509894
30.
31.

Developmental gene regulatory network architecture across 500 million years of echinoderm evolution.

Hinman VF, Nguyen AT, Cameron RA, Davidson EH.

Proc Natl Acad Sci U S A. 2003 Nov 11;100(23):13356-61. Epub 2003 Oct 31.

33.

Expression of anterior Hox genes during larval development of the gastropod Haliotis asinina.

Hinman VF, O'Brien EK, Richards GS, Degnan BM.

Evol Dev. 2003 Sep-Oct;5(5):508-21.

PMID:
12950629
34.
35.
36.

Evolution and developmental expression of nuclear receptor genes in the ascidian Herdmania.

Devine C, Hinman VF, Degnan BM.

Int J Dev Biol. 2002;46(4):687-92.

37.

Ecological regulation of development: induction of marine invertebrate metamorphosis.

Jackson D, Leys SP, Hinman VF, Woods R, Lavin MF, Degnan BM.

Int J Dev Biol. 2002;46(4):679-86. Review.

38.

A provisional regulatory gene network for specification of endomesoderm in the sea urchin embryo.

Davidson EH, Rast JP, Oliveri P, Ransick A, Calestani C, Yuh CH, Minokawa T, Amore G, Hinman V, Arenas-Mena C, Otim O, Brown CT, Livi CB, Lee PY, Revilla R, Schilstra MJ, Clarke PJ, Rust AG, Pan Z, Arnone MI, Rowen L, Cameron RA, McClay DR, Hood L, Bolouri H.

Dev Biol. 2002 Jun 1;246(1):162-90.

39.
40.

A genomic regulatory network for development.

Davidson EH, Rast JP, Oliveri P, Ransick A, Calestani C, Yuh CH, Minokawa T, Amore G, Hinman V, Arenas-Mena C, Otim O, Brown CT, Livi CB, Lee PY, Revilla R, Rust AG, Pan Zj, Schilstra MJ, Clarke PJ, Arnone MI, Rowen L, Cameron RA, McClay DR, Hood L, Bolouri H.

Science. 2002 Mar 1;295(5560):1669-78. Review.

PMID:
11872831
41.

Expression of a Scr/Hox5 gene in the larval central nervous system of the gastropod Haliotis, a non-segmented spiralian lophotrochozoan.

Giusti AF, Hinman VF, Degnan SM, Degnan BM, Morse DE.

Evol Dev. 2000 Sep-Oct;2(5):294-302.

PMID:
11252558
42.

Neuroectodermal and endodermal expression of the ascidian Cdx gene is separated by metamorphosis.

Hinman VF, Becker E, Degnan BM.

Dev Genes Evol. 2000 Apr;210(4):212-6.

PMID:
11180824
43.

Retinoic acid perturbs Otx gene expression in the ascidian pharynx.

Hinman VF, Degnan BM.

Dev Genes Evol. 2000 Mar;210(3):129-39.

PMID:
11180813
44.

Hemps, a novel EGF-like protein, plays a central role in ascidian metamorphosis.

Eri R, Arnold JM, Hinman VF, Green KM, Jones MK, Degnan BM, Lavin MF.

Development. 1999 Dec;126(24):5809-18.

45.

Supplemental Content

Loading ...
Support Center