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Items: 29

1.

Uneven Distribution of Mutational Variance Across the Transcriptome of Drosophila serrata Revealed by High-Dimensional Analysis of Gene Expression.

Hine E, Runcie DE, McGuigan K, Blows MW.

Genetics. 2018 Aug;209(4):1319-1328. doi: 10.1534/genetics.118.300757. Epub 2018 Jun 8.

PMID:
29884746
2.

Examination of the Enterotoxigenic Escherichia coli Population Structure during Human Infection.

Sahl JW, Sistrunk JR, Fraser CM, Hine E, Baby N, Begum Y, Luo Q, Sheikh A, Qadri F, Fleckenstein JM, Rasko DA.

MBio. 2015 Jun 9;6(3):e00501. doi: 10.1128/mBio.00501-15.

3.

Standardized metadata for human pathogen/vector genomic sequences.

Dugan VG, Emrich SJ, Giraldo-Calderón GI, Harb OS, Newman RM, Pickett BE, Schriml LM, Stockwell TB, Stoeckert CJ Jr, Sullivan DE, Singh I, Ward DV, Yao A, Zheng J, Barrett T, Birren B, Brinkac L, Bruno VM, Caler E, Chapman S, Collins FH, Cuomo CA, Di Francesco V, Durkin S, Eppinger M, Feldgarden M, Fraser C, Fricke WF, Giovanni M, Henn MR, Hine E, Hotopp JD, Karsch-Mizrachi I, Kissinger JC, Lee EM, Mathur P, Mongodin EF, Murphy CI, Myers G, Neafsey DE, Nelson KE, Nierman WC, Puzak J, Rasko D, Roos DS, Sadzewicz L, Silva JC, Sobral B, Squires RB, Stevens RL, Tallon L, Tettelin H, Wentworth D, White O, Will R, Wortman J, Zhang Y, Scheuermann RH.

PLoS One. 2014 Jun 17;9(6):e99979. doi: 10.1371/journal.pone.0099979. eCollection 2014.

4.

Evolutionary constraints in high-dimensional trait sets.

Hine E, McGuigan K, Blows MW.

Am Nat. 2014 Jul;184(1):119-31. doi: 10.1086/676504. Epub 2014 May 15.

PMID:
24921605
5.

High-level relatedness among Mycobacterium abscessus subsp. massiliense strains from widely separated outbreaks.

Tettelin H, Davidson RM, Agrawal S, Aitken ML, Shallom S, Hasan NA, Strong M, de Moura VC, De Groote MA, Duarte RS, Hine E, Parankush S, Su Q, Daugherty SC, Fraser CM, Brown-Elliott BA, Wallace RJ Jr, Holland SM, Sampaio EP, Olivier KN, Jackson M, Zelazny AM.

Emerg Infect Dis. 2014 Mar;20(3):364-71. doi: 10.3201/eid2003.131106.

6.

Adult survivorship of the dengue mosquito Aedes aegypti varies seasonally in central Vietnam.

Hugo LE, Jeffery JA, Trewin BJ, Wockner LF, Nguyen TY, Nguyen HL, Nghia le T, Hine E, Ryan PA, Kay BH.

PLoS Negl Trop Dis. 2014 Feb 13;8(2):e2669. doi: 10.1371/journal.pntd.0002669. eCollection 2014 Feb.

7.

Molecular signature of high yield (growth) influenza a virus reassortants prepared as candidate vaccine seeds.

Ramanunninair M, Le J, Onodera S, Fulvini AA, Pokorny BA, Silverman J, Devis R, Arroyo JM, He Y, Boyne A, Bera J, Halpin R, Hine E, Spiro DJ, Bucher D.

PLoS One. 2013 Jun 11;8(6):e65955. doi: 10.1371/journal.pone.0065955. Print 2013.

8.

Comparing G: multivariate analysis of genetic variation in multiple populations.

Aguirre JD, Hine E, McGuigan K, Blows MW.

Heredity (Edinb). 2014 Jan;112(1):21-9. doi: 10.1038/hdy.2013.12. Epub 2013 Mar 13.

9.

Genomic insights into the emerging human pathogen Mycobacterium massiliense.

Tettelin H, Sampaio EP, Daugherty SC, Hine E, Riley DR, Sadzewicz L, Sengamalay N, Shefchek K, Su Q, Tallon LJ, Conville P, Olivier KN, Holland SM, Fraser CM, Zelazny AM.

J Bacteriol. 2012 Oct;194(19):5450. doi: 10.1128/JB.01200-12.

10.

Genomic diversity of 2010 Haitian cholera outbreak strains.

Hasan NA, Choi SY, Eppinger M, Clark PW, Chen A, Alam M, Haley BJ, Taviani E, Hine E, Su Q, Tallon LJ, Prosper JB, Furth K, Hoq MM, Li H, Fraser-Liggett CM, Cravioto A, Huq A, Ravel J, Cebula TA, Colwell RR.

Proc Natl Acad Sci U S A. 2012 Jul 17;109(29):E2010-7. doi: 10.1073/pnas.1207359109. Epub 2012 Jun 18.

11.

High-dimensional variance partitioning reveals the modular genetic basis of adaptive divergence in gene expression during reproductive character displacement.

McGraw EA, Ye YH, Foley B, Chenoweth SF, Higgie M, Hine E, Blows MW.

Evolution. 2011 Nov;65(11):3126-37. doi: 10.1111/j.1558-5646.2011.01371.x. Epub 2011 Jun 27.

PMID:
22023580
12.

Natural selection stops the evolution of male attractiveness.

Hine E, McGuigan K, Blows MW.

Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3659-64. doi: 10.1073/pnas.1011876108. Epub 2011 Feb 14.

13.

PB2 residue 158 is a pathogenic determinant of pandemic H1N1 and H5 influenza a viruses in mice.

Zhou B, Li Y, Halpin R, Hine E, Spiro DJ, Wentworth DE.

J Virol. 2011 Jan;85(1):357-65. doi: 10.1128/JVI.01694-10. Epub 2010 Oct 20.

14.

Unseasonal transmission of H3N2 influenza A virus during the swine-origin H1N1 pandemic.

Ghedin E, Wentworth DE, Halpin RA, Lin X, Bera J, DePasse J, Fitch A, Griesemer S, Hine E, Katzel DA, Overton L, Proudfoot K, Sitz J, Szczypinski B, StGeorge K, Spiro DJ, Holmes EC.

J Virol. 2010 Jun;84(11):5715-8. doi: 10.1128/JVI.00018-10. Epub 2010 Mar 17.

15.

The early diversification of influenza A/H1N1pdm.

Nelson M, Spiro D, Wentworth D, Beck E, Fan J, Ghedin E, Halpin R, Bera J, Hine E, Proudfoot K, Stockwell T, Lin X, Griesemer S, Kumar S, Bose M, Viboud C, Holmes E, Henrickson K.

PLoS Curr. 2009 Nov 3;1:RRN1126.

16.

Evolutionary dynamics of human rotaviruses: balancing reassortment with preferred genome constellations.

McDonald SM, Matthijnssens J, McAllen JK, Hine E, Overton L, Wang S, Lemey P, Zeller M, Van Ranst M, Spiro DJ, Patton JT.

PLoS Pathog. 2009 Oct;5(10):e1000634. doi: 10.1371/journal.ppat.1000634. Epub 2009 Oct 23.

17.

Characterizing the evolution of genetic variance using genetic covariance tensors.

Hine E, Chenoweth SF, Rundle HD, Blows MW.

Philos Trans R Soc Lond B Biol Sci. 2009 Jun 12;364(1523):1567-78. doi: 10.1098/rstb.2008.0313.

18.

Insights into the Musa genome: syntenic relationships to rice and between Musa species.

Lescot M, Piffanelli P, Ciampi AY, Ruiz M, Blanc G, Leebens-Mack J, da Silva FR, Santos CM, D'Hont A, Garsmeur O, Vilarinhos AD, Kanamori H, Matsumoto T, Ronning CM, Cheung F, Haas BJ, Althoff R, Arbogast T, Hine E, Pappas GJ Jr, Sasaki T, Souza MT Jr, Miller RN, Glaszmann JC, Town CD.

BMC Genomics. 2008 Jan 30;9:58. doi: 10.1186/1471-2164-9-58.

19.

Effects of SCA1, MJD, and DPRLA triplet repeat polymorphisms on cognitive phenotypes in a normal population of adolescent twins.

Luciano M, Hine E, Wright MJ, Duffy DL, MacMillan J, Martin NG.

Am J Med Genet B Neuropsychiatr Genet. 2007 Jan 5;144B(1):95-100.

PMID:
16967484
20.

Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy.

Town CD, Cheung F, Maiti R, Crabtree J, Haas BJ, Wortman JR, Hine EE, Althoff R, Arbogast TS, Tallon LJ, Vigouroux M, Trick M, Bancroft I.

Plant Cell. 2006 Jun;18(6):1348-59. Epub 2006 Apr 21.

21.

Determining the effective dimensionality of the genetic variance-covariance matrix.

Hine E, Blows MW.

Genetics. 2006 Jun;173(2):1135-44. Epub 2006 Mar 17.

23.

Searching for new markers of endogenous steroid administration in athletes: "looking outside the metabolic box".

Cawley AT, Hine ER, Trout GJ, George AV, Kazlauskas R.

Forensic Sci Int. 2004 Jul 16;143(2-3):103-14.

PMID:
15240029
24.

Orientation of the genetic variance-covariance matrix and the fitness surface for multiple male sexually selected traits.

Blows MW, Chenoweth SF, Hine E.

Am Nat. 2004 Mar;163(3):329-40. Epub 2004 Mar 9.

PMID:
15026971
25.

Positive genetic correlation between female preference and offspring fitness.

Hine E, Lachish S, Higgie M, Blows MW.

Proc Biol Sci. 2002 Nov 7;269(1506):2215-9.

26.

What is your diagnosis? Osteosarcoma of the spine in a dog.

Hine EA, Sheppard E, Schulz K, Steinheimer D.

J Am Vet Med Assoc. 1997 Oct 15;211(8):987-8. No abstract available.

PMID:
9343541
27.
28.

Analysis of DNA in fresh and fixed tissue by the polymerase chain reaction.

Rogers BB, Alpert LC, Hine EA, Buffone GJ.

Am J Pathol. 1990 Mar;136(3):541-8.

29.

New semisolid agar for the detection of motile salmonellae.

Hine EA, Stefen EK, Wagner JE.

J Clin Microbiol. 1988 May;26(5):875-8.

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