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Single-Cell Analysis of Circulating Tumor Cells.

Thiele JA, Pitule P, Hicks J, Kuhn P.

Methods Mol Biol. 2019;1908:243-264. doi: 10.1007/978-1-4939-9004-7_17.


Bradykinin 1 receptor blockade subdues systemic autoimmunity, renal inflammation, and blood pressure in murine lupus nephritis.

Qin L, Du Y, Ding H, Haque A, Hicks J, Pedroza C, Mohan C.

Arthritis Res Ther. 2019 Jan 8;21(1):12. doi: 10.1186/s13075-018-1774-x.


Single-Cell Applications of Next-Generation Sequencing.

Anaparthy N, Ho YJ, Martelotto L, Hammell M, Hicks J.

Cold Spring Harb Perspect Med. 2019 Jan 7. pii: a026898. doi: 10.1101/cshperspect.a026898. [Epub ahead of print]


Neuroblastoma of the Bone and Bone Marrow Without an Apparent Primary Site: Report of 4 Cases With Long-term Follow-up.

Rainusso N, Seghers V, Egler R, Hicks J, Russell HV.

Pediatr Dev Pathol. 2019 Jan 2:1093526618822597. doi: 10.1177/1093526618822597. [Epub ahead of print]


Dealing with context in logic model development: Reflections from a realist evaluation of a community health worker programme in Nigeria.

Ebenso B, Manzano A, Uzochukwu B, Etiaba E, Huss R, Ensor T, Newell J, Onwujekwe O, Ezumah N, Hicks J, Mirzoev T.

Eval Program Plann. 2018 Dec 7;73:97-110. doi: 10.1016/j.evalprogplan.2018.12.002. [Epub ahead of print]


Mammalian Cell-driven Polymerisation of Pyrrole.

Sherman HG, Jain A, Hicks J, Stolnik S, Alexander C, Rawson FJ.

Chembiochem. 2018 Dec 20. doi: 10.1002/cbic.201800630. [Epub ahead of print]


Is integrated private-clinic based early child development care effective? A clustered randomised trial in Pakistan.

Khan MA, Owais SS, Maqbool S, Ishaq S, Khan HJ, Minhas FA, Hicks J, Khan MA, Walley JD.

BJGP Open. 2018 Jun 27;2(2):bjgpopen18X101593. doi: 10.3399/bjgpopen18X101593. eCollection 2018 Jul.


Generation of patient-derived tumor xenografts from percutaneous tumor biopsies in children with bone sarcomas.

Rainusso N, Cleveland H, Hernandez JA, Quintanilla NM, Hicks J, Vasudevan S, Marco RAW, Allen-Rhoades W, Wang LL, Yustein JT.

Pediatr Blood Cancer. 2018 Dec 11:e27579. doi: 10.1002/pbc.27579. [Epub ahead of print]


Borylated N-heterocyclic carbenes: rearrangement and chemical trapping.

Aldridge S, Kristinsdottir L, Vasko P, Niu H, Kolychev E, Campos J, Fuentes MA, Hicks J, Thompson AL.

Chemistry. 2018 Dec 11. doi: 10.1002/chem.201804808. [Epub ahead of print]


Reduction of Carbon Oxides by an Acyclic Silylene: Reductive Coupling of CO.

Protchenko AV, Vasko P, Do DCH, Hicks J, Fuentes MÁ, Jones C, Aldridge S.

Angew Chem Int Ed Engl. 2018 Dec 7. doi: 10.1002/anie.201812675. [Epub ahead of print]


Factors associated with self-reported anal cancer screening history in men who have sex with men.

Hicks JT, Hwang LY, Baraniuk S, White M, Chiao EY, Onwuka N, Ross MW, Nyitray AG.

Sex Health. 2018 Dec 6. doi: 10.1071/SH18039. [Epub ahead of print]


Multiple configurations of EGFR exon 20 resistance mutations after first- and third-generation EGFR TKI treatment affect treatment options in NSCLC.

Goldberg ME, Montesion M, Young L, Suh J, Greenbowe J, Kennedy M, Giaccone G, Akerley WL, Dowlati A, Creelan BC, Hicks JK, Hesketh PJ, Kelly KL, Riess JW, Miller VA, Stephens PJ, Frampton GM, Ali S, Gregg JP, Albacker LA.

PLoS One. 2018 Nov 27;13(11):e0208097. doi: 10.1371/journal.pone.0208097. eCollection 2018.


Improving household surveys and use of data to address health inequities in three Asian cities: protocol for the Surveys for Urban Equity (SUE) mixed methods and feasibility study.

Elsey H, Poudel AN, Ensor T, Mirzoev T, Newell JN, Hicks JP, Cartwright C, Wong D, Tait C, Baral S, Bhattarai R, Khanal S, Dhungel R, Gajurel S, Manandhar S, Mashreky S, Ferdoush J, Huque R, Ferdous T, Nasreen S, Van Minh H, Duc DM, Ngoc B, Thomson D, Wallace H.

BMJ Open. 2018 Nov 25;8(11):e024182. doi: 10.1136/bmjopen-2018-024182.


Biologic Adjuvants for the Management of Osteochondral Lesions of the Talus.

Hogan MV, Hicks JJ, Chambers MC, Kennedy JG.

J Am Acad Orthop Surg. 2018 Nov 13. doi: 10.5435/JAAOS-D-16-00840. [Epub ahead of print]


Estimating the effect size of surgery to improve walking in children with cerebral palsy from retrospective observational clinical data.

Rajagopal A, Kidziński Ł, McGlaughlin AS, Hicks JL, Delp SL, Schwartz MH.

Sci Rep. 2018 Nov 5;8(1):16344. doi: 10.1038/s41598-018-33962-2.


Intratumoral temozolomide in spontaneous canine gliomas: feasibility of a novel therapy using implanted microcylinders.

Hicks J, Platt S, Stewart G, Senneca C, Holmes S, Kent M, Howerth E, Kaplan J, Kaplan E.

Vet Med Sci. 2018 Nov 5. doi: 10.1002/vms3.124. [Epub ahead of print]


RISING SUN: Prioritized Outcomes for Suicide Prevention in the Arctic.

Collins PY, Delgado RA Jr, Apok C, Baez L, Bjerregaard P, Chatwood S, Chipp C, Crawford A, Crosby A, Dillard D, Driscoll D, Ericksen H, Hicks J, Larsen CVL, McKeon R, Partapuoli PJ, Phillips A, Pringle B, Rasmus S, Sigurðardóttir S, Silviken A, Stoor JP, Sumarokov Y, Wexler L.

Psychiatr Serv. 2018 Oct 24:appips201700505. doi: 10.1176/ [Epub ahead of print]


Integrating a diabetes and hypertension case management package within primary health care: a mixed methods feasibility study in Bangladesh.

Huque R, Nasreen S, Ahmed F, Hicks JP, Walley J, Newell JN, Elsey H.

BMC Health Serv Res. 2018 Oct 23;18(1):811. doi: 10.1186/s12913-018-3601-0.


Impact of using eHealth tools to extend health services to rural areas of Nigeria: protocol for a mixed-method, non-randomised cluster trial.

Ebenso B, Allsop MJ, Okusanya B, Akaba G, Tukur J, Okunade K, Akeju D, Ajepe A, Dirisu O, Yalma R, Sadeeq AI, Okuzu O, Ors T, Jagger T, Hicks JP, Mirzoev T, Newell JN.

BMJ Open. 2018 Oct 18;8(10):e022174. doi: 10.1136/bmjopen-2018-022174.


Identification of a novel MTAP-RAF1 fusion in a soft tissue sarcoma.

Hicks JK, Henderson-Jackson E, Duggan J, Joyce DM, Brohl AS.

Diagn Pathol. 2018 Oct 12;13(1):77. doi: 10.1186/s13000-018-0759-z.


Cysteine biosynthesis in Neisseria species.

Hicks JL, Mullholland CV.

Microbiology. 2018 Dec;164(12):1471-1480. doi: 10.1099/mic.0.000728. Epub 2018 Oct 11.


Effect of Preanalytic Variables on an Automated PTEN Immunohistochemistry Assay for Prostate Cancer.

Guedes LB, Morais CL, Fedor H, Hicks J, Gurel B, Melamed J, Lee P, Gopalan A, Knudsen BS, True LD, Scher HI; Inter-SPORE Prostate Biomarkers Study Team, Fine SW, Trock BJ, De Marzo AM, Lotan TL.

Arch Pathol Lab Med. 2018 Oct 8. doi: 10.5858/arpa.2018-0068-OA. [Epub ahead of print]


AXL Is a Putative Tumor Suppressor and Dormancy Regulator in Prostate Cancer.

Axelrod HD, Valkenburg KC, Amend SR, Hicks JL, Parsana P, Torga G, DeMarzo AM, Pienta KJ.

Mol Cancer Res. 2018 Oct 5. doi: 10.1158/1541-7786.MCR-18-0718. [Epub ahead of print]


Machine learning in human movement biomechanics: Best practices, common pitfalls, and new opportunities.

Halilaj E, Rajagopal A, Fiterau M, Hicks JL, Hastie TJ, Delp SL.

J Biomech. 2018 Nov 16;81:1-11. doi: 10.1016/j.jbiomech.2018.09.009. Epub 2018 Sep 13. Review.


Simulation of a medication and methylation effects on triglycerides in the Genetic Analysis Workshop 20.

Kraja AT, An P, Lenzini P, Lin SJ, Williams C, Hicks JE, Warwick Daw E, Province MA.

BMC Proc. 2018 Sep 17;12(Suppl 9):25. doi: 10.1186/s12919-018-0115-z. eCollection 2018.


Methods for detecting methylation by SNP interaction in GAW20 simulation.

Daw EW, Hicks J, Lenzini P, Lin SJ, Wang J, Williams C, An P, Province MA, Kraja AT.

BMC Proc. 2018 Sep 17;12(Suppl 9):37. doi: 10.1186/s12919-018-0140-y. eCollection 2018.


Landscape of EGFR-Dependent and -Independent Resistance Mechanisms to Osimertinib and Continuation Therapy Beyond Progression in EGFR-Mutant NSCLC.

Le X, Puri S, Negrao MV, Nilsson MB, Robichaux J, Boyle T, Hicks JK, Lovinger KL, Roarty E, Rinsurongkawong W, Tang M, Sun H, Elamin Y, Lacerda LC, Lewis J, Roth JA, Swisher SG, Lee JJ, William WN Jr, Glisson BS, Zhang J, Papadimitrakopoulou VA, Gray JE, Heymach JV.

Clin Cancer Res. 2018 Dec 15;24(24):6195-6203. doi: 10.1158/1078-0432.CCR-18-1542. Epub 2018 Sep 18.


Transmission Dynamics of Highly Pathogenic Avian Influenza Virus A(H5Nx) Clade, North America, 2014-2015.

Lee DH, Torchetti MK, Hicks J, Killian ML, Bahl J, Pantin-Jackwood M, Swayne DE.

Emerg Infect Dis. 2018 Oct;24(10):1840-1848. doi: 10.3201/eid2410.171891.


Economics of Mass Deworming Programs.

Ahuja A, Baird S, Hicks JH, Kremer M, Miguel E.

In: Bundy DAP, Silva Nd, Horton S, Jamison DT, Patton GC, editors. Child and Adolescent Health and Development. 3rd edition. Washington (DC): The International Bank for Reconstruction and Development / The World Bank; 2017 Nov 20. Chapter 29.


Alterations in cellular and viral microRNA and cellular gene expression in Marek's disease virus-transformed T-cell lines treated with sodium butyrate.

Hicks JA, Trakooljul N, Liu HC.

Poult Sci. 2018 Aug 31. doi: 10.3382/ps/pey412. [Epub ahead of print]


Hypomethylation, endogenous retrovirus expression, and interferon signaling in testicular germ cell tumors.

Haffner MC, Taheri D, Luidy-Imada E, Palsgrove DN, Eich ML, Netto GJ, Matoso A, Nirschl TR, Zheng Q, Hicks JL, Nelson WG, De Marzo AM, Marchionni L, Drake CG, Yegnasubramanian S.

Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):E8580-E8582. doi: 10.1073/pnas.1803292115. Epub 2018 Sep 4. No abstract available.


Malignant Peripheral Nerve Sheath Tumors Show Decreased Global DNA Methylation.

Nix JS, Haffner MC, Ahsan S, Hicks J, De Marzo AM, Blakeley J, Raabe EH, Rodriguez FJ.

J Neuropathol Exp Neurol. 2018 Oct 1;77(10):958-963. doi: 10.1093/jnen/nly076.


VapC proteins from Mycobacterium tuberculosis share ribonuclease sequence specificity but differ in regulation and toxicity.

Sharrock A, Ruthe A, Andrews ESV, Arcus VA, Hicks JL.

PLoS One. 2018 Aug 31;13(8):e0203412. doi: 10.1371/journal.pone.0203412. eCollection 2018.


A β-Diketiminate-Stabilized Sila-Acyl Chloride: Systematic Access to Base-Stabilized Silicon Analogues of Classical Carbonyl Compounds.

Do DCH, Protchenko AV, Ángeles Fuentes M, Hicks J, Kolychev EL, Vasko P, Aldridge S.

Angew Chem Int Ed Engl. 2018 Oct 15;57(42):13907-13911. doi: 10.1002/anie.201807543. Epub 2018 Sep 21.


Correction: Opportunities to implement a sustainable genomic medicine program: lessons learned from the IGNITE Network.

Levy KD, Blake K, Fletcher-Hoppe C, Franciosi J, Goto D, Hicks JK, Holmes AM, Kanuri SH, Madden EB, Musty MD, Orlando L, Pratt VM, Ramos M, Wu R, Ginsburg GS.

Genet Med. 2018 Aug 29. doi: 10.1038/s41436-018-0280-5. [Epub ahead of print]


Modeling and predicting osteoarthritis progression: data from the osteoarthritis initiative.

Halilaj E, Le Y, Hicks JL, Hastie TJ, Delp SL.

Osteoarthritis Cartilage. 2018 Dec;26(12):1643-1650. doi: 10.1016/j.joca.2018.08.003. Epub 2018 Aug 18.


Molecular Pathology of High-Grade Prostatic Intraepithelial Neoplasia: Challenges and Opportunities.

Trabzonlu L, Kulac I, Zheng Q, Hicks JL, Haffner MC, Nelson WG, Sfanos KS, Ertunc O, Lotan TL, Heaphy CM, Meeker AK, Yegnasubramanian S, De Marzo AM.

Cold Spring Harb Perspect Med. 2018 Aug 6. pii: a030403. doi: 10.1101/cshperspect.a030403. [Epub ahead of print]


Protocol to develop sustainable day care for children aged 1-4 years in disadvantaged urban communities in Dhaka, Bangladesh.

Das M, Elsey H, Shawon RA, Hicks J, Ferdoush J, Huque R, Fieroze F, Nasreen S, Wallace H, Mashreky SR.

BMJ Open. 2018 Aug 1;8(7):e024101. doi: 10.1136/bmjopen-2018-024101.


Genomic cfDNA Analysis of Aqueous Humor in Retinoblastoma Predicts Eye Salvage: The Surrogate Tumor Biopsy for Retinoblastoma.

Berry JL, Xu L, Kooi I, Murphree AL, Prabakar RK, Reid M, Stachelek K, Le BHA, Welter L, Reiser BJ, Chévez-Barrios P, Jubran R, Lee TC, Kim JW, Kuhn P, Cobrinik D, Hicks J.

Mol Cancer Res. 2018 Nov;16(11):1701-1712. doi: 10.1158/1541-7786.MCR-18-0369. Epub 2018 Jul 30.


Single-cell RNA-seq analysis identifies markers of resistance to targeted BRAF inhibitors in melanoma cell populations.

Ho YJ, Anaparthy N, Molik D, Mathew G, Aicher T, Patel A, Hicks J, Hammell MG.

Genome Res. 2018 Sep;28(9):1353-1363. doi: 10.1101/gr.234062.117. Epub 2018 Jul 30.


Cost-effectiveness analysis of a multi-dimensional intervention to reduce inappropriate antibiotic prescribing for children with upper respiratory tract infections in China.

Zhang Z, Dawkins B, Hicks JP, Walley JD, Hulme C, Elsey H, Deng S, Lin M, Zeng J, Wei X.

Trop Med Int Health. 2018 Oct;23(10):1092-1100. doi: 10.1111/tmi.13132. Epub 2018 Aug 24.


Improved molecular karyotyping in glioblastoma.

Burbulis IE, Wierman MB, Wolpert M, Haakenson M, Lopes MB, Schiff D, Hicks J, Loe J, Ratan A, McConnell MJ.

Mutat Res. 2018 Sep;811:16-26. doi: 10.1016/j.mrfmmm.2018.06.002. Epub 2018 Jul 8.


Clinical Activity of Crizotinib in Lung Adenocarcinoma Harboring a Rare ZCCHC8-ROS1 Fusion.

Hicks JK, Boyle T, Albacker LA, Madison R, Frampton G, Creelan BC.

J Thorac Oncol. 2018 Aug;13(8):e148-e150. doi: 10.1016/j.jtho.2018.03.028. No abstract available.


Implementation of a psychosocial support package for people receiving treatment for multidrug-resistant tuberculosis in Nepal: A feasibility and acceptability study.

Walker IF, Khanal S, Hicks JP, Lamichhane B, Thapa A, Elsey H, Baral SC, Newell JN.

PLoS One. 2018 Jul 26;13(7):e0201163. doi: 10.1371/journal.pone.0201163. eCollection 2018.


OpenSim: Simulating musculoskeletal dynamics and neuromuscular control to study human and animal movement.

Seth A, Hicks JL, Uchida TK, Habib A, Dembia CL, Dunne JJ, Ong CF, DeMers MS, Rajagopal A, Millard M, Hamner SR, Arnold EM, Yong JR, Lakshmikanth SK, Sherman MA, Ku JP, Delp SL.

PLoS Comput Biol. 2018 Jul 26;14(7):e1006223. doi: 10.1371/journal.pcbi.1006223. eCollection 2018 Jul.


Bilateral versus unilateral botulinum toxin injections for chronic anal fissure: a randomised trial.

Pilkington SA, Bhome R, Welch RE, Ku F, Warden C, Harris S, Hicks J, Richardson C, Dudding TC, Knight JS, King AT, Mirnezami AH, Beck NE, Nichols PH, Nugent KP.

Tech Coloproctol. 2018 Jul;22(7):545-551. doi: 10.1007/s10151-018-1821-2. Epub 2018 Jul 18.


Does urinary cytology have a role in haematuria investigations?

Tan WS, Sarpong R, Khetrapal P, Rodney S, Mostafid H, Cresswell J, Watson D, Rane A, Hicks J, Hellawell G, Davies M, Srirangam SJ, Dawson L, Payne D, Williams N, Brew-Graves C, Feber A, Kelly JD; DETECT I trial collaborators.

BJU Int. 2019 Jan;123(1):74-81. doi: 10.1111/bju.14459. Epub 2018 Aug 29.


Opportunities to implement a sustainable genomic medicine program: lessons learned from the IGNITE Network.

Levy KD, Blake K, Fletcher-Hoppe C, Franciosi J, Goto D, Hicks JK, Holmes AM, Kanuri SH, Madden EB, Musty MD, Orlando L, Pratt VM, Ramos M, Wu R, Ginsburg G.

Genet Med. 2018 Jul 12. doi: 10.1038/s41436-018-0080-y. [Epub ahead of print] Erratum in: Genet Med. 2018 Aug 29;:.

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